2Z51A

Crystal structure of arabidopsis cnfu involved in iron-sulfur cluster biosynthesis
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
154
structure length
154
Chain Sequence
MVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal transport
molecule keywords NifU-like protein 2, chloroplast
publication title Structural Analysis of Arabidopsis CnfU Protein: An Iron-Sulfur Cluster Biosynthetic Scaffold in Chloroplasts.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 51
structure length 154
sequence length 154
ec nomenclature
pdb deposition date 2007-06-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01106 NifU NifU-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A01
3.30.300.130 Alpha Beta 2-Layer Sandwich GMP Synthetase; Chain A, domain 3 Fe-S cluster assembly (FSCA) 2z51A02
1WCJA 3LNOA 1UWDA 3CQ2A 1XHJA 3UX3A 2Z51A 1VEHA 3CQ1A 3CQ3A 2M5HA 1TH5A 2JNVA 2CU6A 3UX2A 2M5OA
chains in the Genus database with same CATH superfamily
3J81D 5AE2A 4K0KC 1XRBA 3TUFA 1K0RA 3S82A 2Y4NA 3TDEA 5BSWA 4JI1C 4RM2A 5BSUA 3AY0A 2NCLA 2OPLB 4GKJC 1LCIA 2P2JA 4G37A 4KTVA 1XRCA 2YWBA 4DV1C 1ML8A 4NOZA 4LFBC 3NYRA 4L4QA 3CJEA 1VEHA 1USPB 5KYVA 3T1HC 3LNOA 5BSMA 4D4IA 3IMLA 2P02A 3RV2A 4BCAA 1MDBA 3TQIA 2OPLA 4IR7A 2PT7G 4BC9A 5KEIA 4X62C 2DHMA 2UUCC 4DR1C 4JI6C 1O9TA 1N2FA 2D7VA 4NXNC 2ONFA 5IWAC 3LUSA 3NI2A 4LF9C 4JI0C 1USPA 4OX9C 1NY8A 4X66C 4DUYC 1MXCA 4X64C 1TH5A 2EGTA 4BBYA 1UWDA 4PUGA 5FLXD 4DV6C 1P7LA 3FCCA 3N54B 3RG2A 4WV3A 5A1GA 4DCTA 4DR2C 2ZZMA 3IEVA 2OO4A 4D4GA 2ZM6C 3IEUA 5BSRA 3VNRA 4JI8C 4DR5C 2QVYX 4LF6C 1LQLA 2Y27A 4OXIA 1KKGA 3GR1A 3A26A 4HPVA 3OTOC 5A2QD 2MM9A 1UKKA 3GR0A 5IFIA 2KZ0A 2ASBA 3A4IA 3L8CA 1ZB9A 4GXRA 1L2FA 1IBMC 3G7SA 2P2BA 4WS9A 5E7QA 4DV3C 4XX2A 1PA4A 1O90A 1XRAA 4L2ZA 2M5HA 1PG4A 4LE5A 4JYAC 1T5DX 4DR6C 4DUZC 4RVNA 3UX3A 4R1LA 2UXDC 1MXAA 5LCIA 5ADZA 1ZB8A 2D28C 1RG9A 1P4EC 4DG9A 3UX2A 2BJOA 4ODJA 3R9XA 1BA3A 1P4EA 1EGAA 4RLFA 2VSQA 4MTNA 3CQ1A 3LAXA 5DV9A 5JRHA 3ETCA 2JNVA 1HNWC 1MD9A 1MKYA 2DYJA 2P20A 1ULTA 5KYTA 2Y4OA 1WCJA 1XHJA 1WF3A 4ZJZA 2PN2A 1J5EC 4DV2C 3TR3A 3R9WA 4LF4C 1AMUA 1V26A 1IB8A 2MCQA 2WP0C 4MH4A 4DV5C 3JAMD 1HR0C 3E7XA 1MXBA 2VZEA 3GPCA 1XMOC 2E8CA 4AQYC 1MDFA 5LMUC 1V25A 2P2FA 1M6XC 1M6XA 2DPLA 2P2QA 2OBVA 3N2QA 4G36A 3I07A 2E0GA 4B3SC 1N34C 3B7WA 2Z51A 5T8TA 4NXMC 4JV5C 3T1YC 4G1IA 3FCEA 4JI5C 4FUQA 3I08A 3CQ3A 4YHHC 3O2EA 1XNQC 4GS5A 2D1QA 2MMAB 2UXCC 3IPLA 5A19A 3EERA 4RLQA 2UUAC 5BURA 4JI2C 4RMNA 2JMPA 3AF5A 4I9FA 1N33C 2CY1A 2D1SA 4TPSB 4OYCA 1O93A 2AYAA 3AF6A 5BSVA 3SO4A 4BSZA 4RVOA 4JM1A 2QW0X 3CW9A 4NDNA 2YX1A 3J80D 4I9GA 3K6RA 5BUSA 4B3RC 2ZZNA 3DHVA 2HJGA 2CXCA 5A1IA 1I94C 1PU1A 3UOWA 3ETOA 5CZVA 4ZLPA 5LMNC 2V7BA 3A25A 5K85A 5BR8C 1QWIA 4B3TC 1N32C 1NYEA 4PUIA 4FUTA 3CQ2A 4GXQA 4EATA 1N36C 2ATWA 4DCVA 5GTDA 1HNXC 2E5LC 3A9UA 3GKUA 1FLOA 2BH1X 4D57A 4KHPC 2VQEC 4DCUA 3VNQA 4PUHA 3CW8X 4GKKC 2YCBA 4DR3C 2PROA 4PROC 3L95X 2QL8A 4DCSA 2VQFC 3NPDA 4RM3A 1QM4A 3R44A 3LGXA 5AE1A 3C5EA 1WH9A 4BC7A 4ISBA 4YY3C 3H2TA 2YWCA 2E7GA 5T8SA 1XNRC 3PESA 3VNSA 3UEBA 2M5OA 4LF8C 1RY2A 1XMQC 2CU6A 1PG3A 5K8FA 2E8EA 1YJ7A 4KTTA 4LFAC 3UZ0A 1XS3A 3KXWA 4K0BA 1O92A 5CZXA 4R0MA 2WD9A 3E7WA 3DAYA 4LF7C 5AE3A 1FJGC 2KZFA 2UUBC 4B3MC 3PROC 2QVZX 5H9UA 3DLPX 1IBKC 4DR4C 2D27A 4DV0C 3A9VA 4JI4C 2F4VC 1FUGA 2P2MA 2QVXX 1V60A 2D1TA 3LNVA 4DV4C 5BUQA 3PBKA 4PZPA 4LFCC 2HHHC 4DV7C 2KDNA 2UXBC 1T5HX 5IT9D 4LF5C 4PHTA 5BSTA 4X65C 4JI7C 4DG8A 1JOSA 2E8FA 4D56A 4FTFA 2D1RA 1HH2P 3EQ6A 1GPMA 1HNZC 4L7IA 4JI3C 4IZ6A 4R1MA 2XR1A 2UU9C 3NYQA 1IBLC 4DR7C 1VLAA 4U5YD
chains in the Genus database with same CATH topology
1WCJA 3LNOA 1UWDA 3CQ2A 1XHJA 3UX3A 2Z51A 1VEHA 3CQ1A 3CQ3A 2M5HA 1TH5A 2JNVA 2CU6A 3UX2A 2M5OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WCJ A;  3LNO A;  1UWD A;  3CQ2 A;  1XHJ A;  3UX3 A;  2Z51 A;  1VEH A;  3CQ1 A;  3CQ3 A;  2M5H A;  1TH5 A;  2JNV A;  2CU6 A;  3UX2 A;  2M5O A; 
#chains in the Genus database with same CATH topology
 3J81 D;  5AE2 A;  4K0K C;  1XRB A;  3TUF A;  1K0R A;  3S82 A;  2Y4N A;  3TDE A;  5BSW A;  4JI1 C;  4RM2 A;  5BSU A;  3AY0 A;  2NCL A;  2OPL B;  4GKJ C;  1LCI A;  2P2J A;  4G37 A;  4KTV A;  1XRC A;  2YWB A;  4DV1 C;  1ML8 A;  4NOZ A;  4LFB C;  3NYR A;  4L4Q A;  3CJE A;  1VEH A;  1USP B;  5KYV A;  3T1H C;  3LNO A;  5BSM A;  4D4I A;  3IML A;  2P02 A;  3RV2 A;  4BCA A;  1MDB A;  3TQI A;  2OPL A;  4IR7 A;  2PT7 G;  4BC9 A;  5KEI A;  4X62 C;  2DHM A;  2UUC C;  4DR1 C;  4JI6 C;  1O9T A;  1N2F A;  2D7V A;  4NXN C;  2ONF A;  5IWA C;  3LUS A;  3NI2 A;  4LF9 C;  4JI0 C;  1USP A;  4OX9 C;  1NY8 A;  4X66 C;  4DUY C;  1MXC A;  4X64 C;  1TH5 A;  2EGT A;  4BBY A;  1UWD A;  4PUG A;  5FLX D;  4DV6 C;  1P7L A;  3FCC A;  3N54 B;  3RG2 A;  4WV3 A;  5A1G A;  4DCT A;  4DR2 C;  2ZZM A;  3IEV A;  2OO4 A;  4D4G A;  2ZM6 C;  3IEU A;  5BSR A;  3VNR A;  4JI8 C;  4DR5 C;  2QVY X;  4LF6 C;  1LQL A;  2Y27 A;  4OXI A;  1KKG A;  3GR1 A;  3A26 A;  4HPV A;  3OTO C;  5A2Q D;  2MM9 A;  1UKK A;  3GR0 A;  5IFI A;  2KZ0 A;  2ASB A;  3A4I A;  3L8C A;  1ZB9 A;  4GXR A;  1L2F A;  1IBM C;  3G7S A;  2P2B A;  4WS9 A;  5E7Q A;  4DV3 C;  4XX2 A;  1PA4 A;  1O90 A;  1XRA A;  4L2Z A;  2M5H A;  1PG4 A;  4LE5 A;  4JYA C;  1T5D X;  4DR6 C;  4DUZ C;  4RVN A;  3UX3 A;  4R1L A;  2UXD C;  1MXA A;  5LCI A;  5ADZ A;  1ZB8 A;  2D28 C;  1RG9 A;  1P4E C;  4DG9 A;  3UX2 A;  2BJO A;  4ODJ A;  3R9X A;  1BA3 A;  1P4E A;  1EGA A;  4RLF A;  2VSQ A;  4MTN A;  3CQ1 A;  3LAX A;  5DV9 A;  5JRH A;  3ETC A;  2JNV A;  1HNW C;  1MD9 A;  1MKY A;  2DYJ A;  2P20 A;  1ULT A;  5KYT A;  2Y4O A;  1WCJ A;  1XHJ A;  1WF3 A;  4ZJZ A;  2PN2 A;  1J5E C;  4DV2 C;  3TR3 A;  3R9W A;  4LF4 C;  1AMU A;  1V26 A;  1IB8 A;  2MCQ A;  2WP0 C;  4MH4 A;  4DV5 C;  3JAM D;  1HR0 C;  3E7X A;  1MXB A;  2VZE A;  3GPC A;  1XMO C;  2E8C A;  4AQY C;  1MDF A;  5LMU C;  1V25 A;  2P2F A;  1M6X C;  1M6X A;  2DPL A;  2P2Q A;  2OBV A;  3N2Q A;  4G36 A;  3I07 A;  2E0G A;  4B3S C;  1N34 C;  3B7W A;  2Z51 A;  5T8T A;  4NXM C;  4JV5 C;  3T1Y C;  4G1I A;  3FCE A;  4JI5 C;  4FUQ A;  3I08 A;  3CQ3 A;  4YHH C;  3O2E A;  1XNQ C;  4GS5 A;  2D1Q A;  2MMA B;  2UXC C;  3IPL A;  5A19 A;  3EER A;  4RLQ A;  2UUA C;  5BUR A;  4JI2 C;  4RMN A;  2JMP A;  3AF5 A;  4I9F A;  1N33 C;  2CY1 A;  2D1S A;  4TPS B;  4OYC A;  1O93 A;  2AYA A;  3AF6 A;  5BSV A;  3SO4 A;  4BSZ A;  4RVO A;  4JM1 A;  2QW0 X;  3CW9 A;  4NDN A;  2YX1 A;  3J80 D;  4I9G A;  3K6R A;  5BUS A;  4B3R C;  2ZZN A;  3DHV A;  2HJG A;  2CXC A;  5A1I A;  1I94 C;  1PU1 A;  3UOW A;  3ETO A;  5CZV A;  4ZLP A;  5LMN C;  2V7B A;  3A25 A;  5K85 A;  5BR8 C;  1QWI A;  4B3T C;  1N32 C;  1NYE A;  4PUI A;  4FUT A;  3CQ2 A;  4GXQ A;  4EAT A;  1N36 C;  2ATW A;  4DCV A;  5GTD A;  1HNX C;  2E5L C;  3A9U A;  3GKU A;  1FLO A;  2BH1 X;  4D57 A;  4KHP C;  2VQE C;  4DCU A;  3VNQ A;  4PUH A;  3CW8 X;  4GKK C;  2YCB A;  4DR3 C;  2PRO A;  4PRO C;  3L95 X;  2QL8 A;  4DCS A;  2VQF C;  3NPD A;  4RM3 A;  1QM4 A;  3R44 A;  3LGX A;  5AE1 A;  3C5E A;  1WH9 A;  4BC7 A;  4ISB A;  4YY3 C;  3H2T A;  2YWC A;  2E7G A;  5T8S A;  1XNR C;  3PES A;  3VNS A;  3UEB A;  2M5O A;  4LF8 C;  1RY2 A;  1XMQ C;  2CU6 A;  1PG3 A;  5K8F A;  2E8E A;  1YJ7 A;  4KTT A;  4LFA C;  3UZ0 A;  1XS3 A;  3KXW A;  4K0B A;  1O92 A;  5CZX A;  4R0M A;  2WD9 A;  3E7W A;  3DAY A;  4LF7 C;  5AE3 A;  1FJG C;  2KZF A;  2UUB C;  4B3M C;  3PRO C;  2QVZ X;  5H9U A;  3DLP X;  1IBK C;  4DR4 C;  2D27 A;  4DV0 C;  3A9V A;  4JI4 C;  2F4V C;  1FUG A;  2P2M A;  2QVX X;  1V60 A;  2D1T A;  3LNV A;  4DV4 C;  5BUQ A;  3PBK A;  4PZP A;  4LFC C;  2HHH C;  4DV7 C;  2KDN A;  2UXB C;  1T5H X;  5IT9 D;  4LF5 C;  4PHT A;  5BST A;  4X65 C;  4JI7 C;  4DG8 A;  1JOS A;  2E8F A;  4D56 A;  4FTF A;  2D1R A;  1HH2 P;  3EQ6 A;  1GPM A;  1HNZ C;  4L7I A;  4JI3 C;  4IZ6 A;  4R1M A;  2XR1 A;  2UU9 C;  3NYQ A;  1IBL C;  4DR7 C;  1VLA A;  4U5Y D; 
#chains in the Genus database with same CATH homology
 1WCJ A;  3LNO A;  1UWD A;  3CQ2 A;  1XHJ A;  3UX3 A;  2Z51 A;  1VEH A;  3CQ1 A;  3CQ3 A;  2M5H A;  1TH5 A;  2JNV A;  2CU6 A;  3UX2 A;  2M5O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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