3CAZA

Crystal structure of a bar protein from galdieria sulphuraria
Total Genus 77
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
77
sequence length
205
structure length
205
Chain Sequence
SSNMEVEHWMTSLKEVEKVLDSVEPKLTSSGTKWRVVAQHIKDICSDLNQIFNKEDPRYEVVQAGASAAHDFDVRYLDIHKHGREIARLLEKIQKYRQEIEEIKKEYKETDKYRERYDHYKVKLDNLEKKNKDQERIERNQQKFKDAEAAYSSVCADLIQKMETVWKKHVSIFAEAASAVWSTQLQYAKALEAAANPIVPYLQQE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
molecule keywords BAR protein
publication title Crystal structure of a BAR protein from Galdieria sulphuraria.
rcsb
source organism Galdieria sulphuraria
total genus 77
structure length 205
sequence length 205
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-02-20
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.60 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Arfaptin homology (AH) domain/BAR domain 3cazA00
3M3WA 3QNIA 4H8SA 4NQIA 3Q0KA 3PLTA 1X04A 2X3XA 2RAIA 2Q13A 2RAJA 2X3VA 3CAZA 3ABHA 3QE6A 4NSWA 3SOGA 3HAIA 2V0OA 3Q84A 3OK8A 4ATMA 4DYLA 4WPCA 3HAJA 1I49A 1I4TA 1Y2OA 5C5BA 2D1LA 2RAKA 3ACOA 4DCNC 2Z0NA 3I2WA 5C5BB 2Q12A 2ELBA 3DYTA 3QWEA 3SYVA 2Z0OA 4AVMA 4WPEA 4I1QA 1WDZA 2EFLA 2EFKA 1ZWWA 3HAHA 2D4CA 4AKVA 2X3WA 3G9GA 2Z0VA 2C08A 1URUA 1I4DA 2YKTA 3LLLA 4FZSA 1X03A 2FICA 1I4LA 4BNEA
chains in the Genus database with same CATH superfamily
4NPHA 2ALWA 2NCZA 3T49A 3EJTA 3KDRA 2PMRA 4AZGA 1UPXA 2RAKA 1TQUA 4KIKA 1SUFA 2EFKA 2D4CA 2Z8YA 3EJUA 3LLLA 4JL9A 2WYHA 2FICA 3ER9B 3T47A 4JWCA 4IM3A 2F18A 3QE6A 3ABHA 1TQTA 2OZNB 4HY9A 4EZZA 1GN9A 3QWEA 2QFFA 5TKYA 3D50A 4EZSA 1SU8A 3ER8C 1U00A 4AZ7A 3C7NA 4R5LA 3BUBA 2JNKA 2GA9D 2F7RA 3F7WA 4E81A 2X3VA 2KHOA 2YI8A 4G6QA 3T48A 4B9QA 4JWEA 3DYTA 1LQ7A 1OAOA 2N3KA 2OO2A 4AZCA 1R34A 3D4ZA 3HAHA 3SOGA 4DYLA 3I39X 5FLEX 4EZNA 4I1QA 3B51X 1GNTA 2OBLA 1OA0A 2F7QA 4H6IA 4F01A 1I49A 2YIBA 3ACOA 1JQKA 3G9GA 3D2FA 3BUQA 3QNIA 3EJQA 2O0I1 3Q0KA 1GNLA 2F1BA 3RV1A 4DCNC 5KBPA 4WPEA 3CZSA 2GF4A 3BUPA 5FIGA 2X3WA 2C08A 1I4LA 2EX3B 4D8JA 4JNFA 4NSWA 2JNSA 2PY6A 4JLCA 1O7DC 3B52X 4M0MA 4HYBA 3QA8A 3VEBA 4FM3A 2WINM 3ZEDA 4R5GA 2WYIA 3CVRA 1URUA 2FYVA 1YWMA 2EWFA 2YL5A 1SU6A 4ATMA 1E1DA 4WPCA 4F00A 4EZQA 4JN4A 2ZXQA 4UDYX 3EJSA 2F7OA 3LMFA 2ND1A 4JWDA 4AZHA 4UDXX 2Z0VA 4EZVA 3OWGA 1OA1A 3VKHA 1ZYLA 2YL9A 3DX4A 2OW6A 3CAZA 4IW0A 2V0OA 2F1AA 1Y2OA 3A98A 2Q12A 1HWWA 2GAFD 4HR1A 4EZPA 4JNEA 3BLBA 1R33A 3EJPA 3HAIA 1TQSA 1TQWA 2YLAA 4FZOA 4H6HA 1DKZA 2Z0OA 3DPQA 3BUIA 3CKDA 4AKVA 3EJRA 4FZSA 1X03A 3DX1A 1W9MA 3KAVA 3DDFA 5E84A 4EZOA 2Q13A 2QKWA 5C5BB 3SYVA 2ELBA 2RT6A 3DPOA 4EZXA 3BUDA 1I4DA 3T4AG 3D52A 3O3MB 1QWUA 4PO2A 3BVUA 2YIVX 2RAJA 2X5CA 3FD9A 4EZTA 3L3PA 1R5EA 4EZUA 3LVTA 4KIKB 1SU7A 3GI7A 4EZYA 3ERCC 3D4YA 3B53X 3O3OB 1QWNA 2YIAA 3UITA 4AZBA 1PS3A 3VEAA 1MJGA 2ND0A 3BVTA 4FZPA 2F7PA 4H8SA 4NQIA 3PLTA 1E9VA 4EZWA 3O3NB 3L3OM 3QNJA 3OHXM 1WDZA 3CZNA 3BVWA 1QX1A 4BNEA 4JWIA 4IWQA 4AZ6A 4EZRA 2LXYA 2MI7A 3DX3A 4R5IA 1I4TA 3BVXA 2Z0NA 2YI9A 2OW7A 4AVMA 2YL6A 4AZCB 3DX0A 4E3CA 4R5JA 1O7DB 3M3WA 3CV5A 2X3XA 2RAIA 3DDGA 1HTYA 3Q84A 2LM0A 1DKYA 3D2EA 3HAJA 2QXLA 2D1LA 4AZ5A 3I2WA 2EFLA 3I04A 4HR1B 1E2UA 1ZWWA 4IWPA 2YKTA 4IM2A 2OBMA 3DPPA 4IM0A 1HXKA 1TQVA 2YLLA 1X04A 4R5KA 3DX2A 3KAWA 3OK8A 1DKXA 3BVVA 5C5BA 3T46A 4IWOA 3I01A 2YL8A 4AZIA 3D51A 3RV0A 3RPMA
chains in the Genus database with same CATH topology
3M3WA 3QNIA 4H8SA 4NQIA 3Q0KA 3PLTA 1X04A 2X3XA 2RAIA 2Q13A 2RAJA 2X3VA 3CAZA 3ABHA 3QE6A 4NSWA 3SOGA 3HAIA 2V0OA 3Q84A 3OK8A 4ATMA 4DYLA 4WPCA 3HAJA 1I49A 1I4TA 1Y2OA 5C5BA 2D1LA 2RAKA 3ACOA 4DCNC 2Z0NA 3I2WA 5C5BB 2Q12A 2ELBA 3DYTA 3QWEA 3SYVA 2Z0OA 4AVMA 4WPEA 4I1QA 1WDZA 2EFLA 2EFKA 1ZWWA 3HAHA 2D4CA 4AKVA 2X3WA 3G9GA 2Z0VA 2C08A 1URUA 1I4DA 2YKTA 3LLLA 4FZSA 1X03A 2FICA 1I4LA 4BNEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3M3W A;  3QNI A;  4H8S A;  4NQI A;  3Q0K A;  3PLT A;  1X04 A;  2X3X A;  2RAI A;  2Q13 A;  2RAJ A;  2X3V A;  3CAZ A;  3ABH A;  3QE6 A;  4NSW A;  3SOG A;  3HAI A;  2V0O A;  3Q84 A;  3OK8 A;  4ATM A;  4DYL A;  4WPC A;  3HAJ A;  1I49 A;  1I4T A;  1Y2O A;  5C5B A;  2D1L A;  2RAK A;  3ACO A;  4DCN C;  2Z0N A;  3I2W A;  5C5B B;  2Q12 A;  2ELB A;  3DYT A;  3QWE A;  3SYV A;  2Z0O A;  4AVM A;  4WPE A;  4I1Q A;  1WDZ A;  2EFL A;  2EFK A;  1ZWW A;  3HAH A;  2D4C A;  4AKV A;  2X3W A;  3G9G A;  2Z0V A;  2C08 A;  1URU A;  1I4D A;  2YKT A;  3LLL A;  4FZS A;  1X03 A;  2FIC A;  1I4L A;  4BNE A; 
#chains in the Genus database with same CATH topology
 4NPH A;  2ALW A;  2NCZ A;  3T49 A;  3EJT A;  3KDR A;  2PMR A;  4AZG A;  1UPX A;  2RAK A;  1TQU A;  4KIK A;  1SUF A;  2EFK A;  2D4C A;  2Z8Y A;  3EJU A;  3LLL A;  4JL9 A;  2WYH A;  2FIC A;  3ER9 B;  3T47 A;  4JWC A;  4IM3 A;  2F18 A;  3QE6 A;  3ABH A;  1TQT A;  2OZN B;  4HY9 A;  4EZZ A;  1GN9 A;  3QWE A;  2QFF A;  5TKY A;  3D50 A;  4EZS A;  1SU8 A;  3ER8 C;  1U00 A;  4AZ7 A;  3C7N A;  4R5L A;  3BUB A;  2JNK A;  2GA9 D;  2F7R A;  3F7W A;  4E81 A;  2X3V A;  2KHO A;  2YI8 A;  4G6Q A;  3T48 A;  4B9Q A;  4JWE A;  3DYT A;  1LQ7 A;  1OAO A;  2N3K A;  2OO2 A;  4AZC A;  1R34 A;  3D4Z A;  3HAH A;  3SOG A;  4DYL A;  3I39 X;  5FLE X;  4EZN A;  4I1Q A;  3B51 X;  1GNT A;  2OBL A;  1OA0 A;  2F7Q A;  4H6I A;  4F01 A;  1I49 A;  2YIB A;  3ACO A;  1JQK A;  3G9G A;  3D2F A;  3BUQ A;  3QNI A;  3EJQ A;  2O0I 1;  3Q0K A;  1GNL A;  2F1B A;  3RV1 A;  4DCN C;  5KBP A;  4WPE A;  3CZS A;  2GF4 A;  3BUP A;  5FIG A;  2X3W A;  2C08 A;  1I4L A;  2EX3 B;  4D8J A;  4JNF A;  4NSW A;  2JNS A;  2PY6 A;  4JLC A;  1O7D C;  3B52 X;  4M0M A;  4HYB A;  3QA8 A;  3VEB A;  4FM3 A;  2WIN M;  3ZED A;  4R5G A;  2WYI A;  3CVR A;  1URU A;  2FYV A;  1YWM A;  2EWF A;  2YL5 A;  1SU6 A;  4ATM A;  1E1D A;  4WPC A;  4F00 A;  4EZQ A;  4JN4 A;  2ZXQ A;  4UDY X;  3EJS A;  2F7O A;  3LMF A;  2ND1 A;  4JWD A;  4AZH A;  4UDX X;  2Z0V A;  4EZV A;  3OWG A;  1OA1 A;  3VKH A;  1ZYL A;  2YL9 A;  3DX4 A;  2OW6 A;  3CAZ A;  4IW0 A;  2V0O A;  2F1A A;  1Y2O A;  3A98 A;  2Q12 A;  1HWW A;  2GAF D;  4HR1 A;  4EZP A;  4JNE A;  3BLB A;  1R33 A;  3EJP A;  3HAI A;  1TQS A;  1TQW A;  2YLA A;  4FZO A;  4H6H A;  1DKZ A;  2Z0O A;  3DPQ A;  3BUI A;  3CKD A;  4AKV A;  3EJR A;  4FZS A;  1X03 A;  3DX1 A;  1W9M A;  3KAV A;  3DDF A;  5E84 A;  4EZO A;  2Q13 A;  2QKW A;  5C5B B;  3SYV A;  2ELB A;  2RT6 A;  3DPO A;  4EZX A;  3BUD A;  1I4D A;  3T4A G;  3D52 A;  3O3M B;  1QWU A;  4PO2 A;  3BVU A;  2YIV X;  2RAJ A;  2X5C A;  3FD9 A;  4EZT A;  3L3P A;  1R5E A;  4EZU A;  3LVT A;  4KIK B;  1SU7 A;  3GI7 A;  4EZY A;  3ERC C;  3D4Y A;  3B53 X;  3O3O B;  1QWN A;  2YIA A;  3UIT A;  4AZB A;  1PS3 A;  3VEA A;  1MJG A;  2ND0 A;  3BVT A;  4FZP A;  2F7P A;  4H8S A;  4NQI A;  3PLT A;  1E9V A;  4EZW A;  3O3N B;  3L3O M;  3QNJ A;  3OHX M;  1WDZ A;  3CZN A;  3BVW A;  1QX1 A;  4BNE A;  4JWI A;  4IWQ A;  4AZ6 A;  4EZR A;  2LXY A;  2MI7 A;  3DX3 A;  4R5I A;  1I4T A;  3BVX A;  2Z0N A;  2YI9 A;  2OW7 A;  4AVM A;  2YL6 A;  4AZC B;  3DX0 A;  4E3C A;  4R5J A;  1O7D B;  3M3W A;  3CV5 A;  2X3X A;  2RAI A;  3DDG A;  1HTY A;  3Q84 A;  2LM0 A;  1DKY A;  3D2E A;  3HAJ A;  2QXL A;  2D1L A;  4AZ5 A;  3I2W A;  2EFL A;  3I04 A;  4HR1 B;  1E2U A;  1ZWW A;  4IWP A;  2YKT A;  4IM2 A;  2OBM A;  3DPP A;  4IM0 A;  1HXK A;  1TQV A;  2YLL A;  1X04 A;  4R5K A;  3DX2 A;  3KAW A;  3OK8 A;  1DKX A;  3BVV A;  5C5B A;  3T46 A;  4IWO A;  3I01 A;  2YL8 A;  4AZI A;  3D51 A;  3RV0 A;  3RPM A; 
#chains in the Genus database with same CATH homology
 3M3W A;  3QNI A;  4H8S A;  4NQI A;  3Q0K A;  3PLT A;  1X04 A;  2X3X A;  2RAI A;  2Q13 A;  2RAJ A;  2X3V A;  3CAZ A;  3ABH A;  3QE6 A;  4NSW A;  3SOG A;  3HAI A;  2V0O A;  3Q84 A;  3OK8 A;  4ATM A;  4DYL A;  4WPC A;  3HAJ A;  1I49 A;  1I4T A;  1Y2O A;  5C5B A;  2D1L A;  2RAK A;  3ACO A;  4DCN C;  2Z0N A;  3I2W A;  5C5B B;  2Q12 A;  2ELB A;  3DYT A;  3QWE A;  3SYV A;  2Z0O A;  4AVM A;  4WPE A;  4I1Q A;  1WDZ A;  2EFL A;  2EFK A;  1ZWW A;  3HAH A;  2D4C A;  4AKV A;  2X3W A;  3G9G A;  2Z0V A;  2C08 A;  1URU A;  1I4D A;  2YKT A;  3LLL A;  4FZS A;  1X03 A;  2FIC A;  1I4L A;  4BNE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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