3EJEA

Crystal structure of p450bioi in complex with octadec-9z-enoic acid ligated acyl carrier protein
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
78
structure length
78
Chain Sequence
SHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/lipid transport
molecule keywords Acyl carrier protein
publication title Structural insights from a P450 Carrier Protein complex reveal how specificity is achieved in the P450(BioI) ACP complex.
pubmed doi rcsb
source organism Escherichia coli
total genus 22
structure length 78
sequence length 78
chains with identical sequence C, E, G
ec nomenclature
pdb deposition date 2008-09-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 3ejeA00
2LL8A 5KP7B 2L22A 2K92A 1L0HA 4BPFA 1DNYA 2LPKA 2AVAA 2JGPA 2CGQA 2LMLA 4NEOA 2K93A 2LIWA 1HY8A 2MVVA 3LMOA 3RG2A 2AFEA 2FHSC 4HKGA 2FADA 2CNRA 1AF8A 2FACA 2L4BA 4H2YC 4PXHB 2MR7A 2N5IA 2N50A 2KOOA 2X2BA 3GZLA 2LIUA 1OR5A 3CE7A 5HV8A 1T8KA 4PWVB 2L0QA 2GDWA 2K0XA 4H2XC 2KR5A 4MRTC 2PNGA 2LOLA 3NY7B 2XZ0D 2KGDA 2GDXA 2MR8A 2XZ1C 2KGCA 3EJBA 2MD9A 2KG6A 2KW2A 4BPGA 2KORA 1NQ4A 1ACPA 2JQ4A 2CQ8A 2EHSA 2N6YA 2AF8A 5CZDB 2KOSA 2KWLA 1X3OA 2M5RA 2KG9A 4IZ6A 2LKIA 2DNWA 3GZMA 2VSQA 4H2WC 1HQBA 2EHTA 2GDYA 1L0IA 1DV5A 2FQ0A 2ROQA 2FVAA 2JU2A 4R0MA 5HVCA 3EJDA 2N6ZA 1KLPA 2N98A 2LTEA 2MY5A 2CG5B 2QNWA 2KGEA 1F80D 2KGAA 2L9FA 2MVUA 4BPHA 4CA3A 4DG9A 2K94A 2K2QA 5KP8B 5KP6B 2N5HA 1VKUA 2KOQA 5EJDA 2FVEA 2JU1A 2FQ1A 2FAEA 2AFDA 2FQ2A 2KOPA 2K0YA 3EJEA 2MF4A 2FVFA 2KG8A
chains in the Genus database with same CATH superfamily
2CWOA 1BAJA 1L0HA 1VQ9P 2AVAA 3E2DA 3M1MA 3U43A 1VQOP 3HYBA 3B4QA 5EW5E 2AFEA 4XROA 3GKLC 2FADA 1NJIQ 2P9XA 1YI2P 1JJ2O 1AF8A 2FACA 4F37A 4GR6A 2Z45A 1VHNA 4PXHB 4QKOA 2MR7A 1GPJA 2N50A 2Z44A 1IUQA 2KOOA 3GZLA 1OR5A 1T8KA 1VQNP 3G6EP 2KR5A 2GDXA 3EJBA 1ZMBA 1YJWP 2GZJA 2JQ4A 2M8PA 3CCMP 1M6NA 2OARA 3CCLP 1KC8Q 3GZMA 2VLOA 2VSQA 3WBHA 3DS4A 1L0IA 2FVAA 4U0FA 1YJ9P 5HVCA 2EIAA 3CCQP 2MY5A 1RNIA 1K8AQ 2QA4P 2L9FA 3H47A 2QEXP 4BPHA 1Q86Q 4QNBA 2VLNA 1VKUA 2KOQA 5EJDA 4GR2A 2FVEA 2AFDA 2FQ2A 1EMVA 3EJEA 1Q82Q 3DS3A 5HGMA 4BPFA 3CPWO 3I56P 1VQ6P 1BXIA 2JGPA 2LMLA 2K93A 2GYKA 5HGNA 4PH0A 3RG2A 1QVGO 2VLPA 2CNRA 2JYLA 2L4BA 4U0BA 4H2YC 3DPHA 2GZGA 2VLQA 2E1MA 2X2BA 2LIUA 3G28A 1K9MQ 2JYGA 2PEJA 4MRTC 2LOLA 4WYMA 1ZNVA 4XFYA 1YJNP 2PEMA 3CCEP 1RO2A 2KW2A 2GZFA 3NTEA 4BPGA 2KORA 3GJNA 2EFJA 1ACPA 2PEOA 2CQ8A 2EHSA 1AYIA 1EOQA 1A8OA 1VQMP 1X3OA 2M5RA 3CCUP 4IZ6A 4XFXA 2EHTA 2GDYA 3G1IA 1K30A 2JU2A 2GZEA 2N6ZA 1M1KQ 1KLPA 2JO0A 2LTEA 2CG5B 3G71P 3CC4P 2PEIA 1F80D 2KGAA 2MVUA 3DS0A 3CC2P 4CA3A 4DG9A 1KD1Q 1S72P 2K94A 2PEQA 4COCA 2FAEA 2LF4A 2KG8A 3DTJA 2LL8A 2GZIA 2L22A 1QVFO 1RO0A 1DNYA 2BHVA 3DS5A 1Z6MA 5I4TG 2CGQA 3CCRP 1UJZA 2L6EA 3CMEP 2PY8A 1M90Q 3LMOA 2XT1A 2FHSC 2EG5A 4PH1A 1CEIA 3CC7P 2K0DX 2ERHA 1Q81Q 2PENA 4M0IA 3CCVP 3CE7A 5HV8A 4PWVB 2GDWA 2ONTA 2XXMA 4H2XC 5DCKA 2BUOA 2PNGA 2M8LA 1VQLP 2XZ1C 2KGCA 2MD9A 4XFZA 1VQKP 3G4SP 3CD6P 5HGLA 1QRJA 3OW2O 2JBGA 2N6YA 4XRQA 5CZDB 1YITP 2KWLA 2NO8A 2DNWA 1EIAA 1D1DA 4H2WC 1HQBA 1DV5A 5F2KA 2ROQA 4R0MA 1VQPP 4UHPB 3EJDA 1E0HA 2QNWA 2KGEA 1GXHA 1KQSO 4U0AA 5KP6B 1FR2A 2N5HA 4IPYA 1M74A 2JU1A 2FQ1A 1M6EX 7CEIA 2DGYA 2KOPA 2K0YA 2MF4A 1YHQP 2FVFA 5KP7B 2K92A 2OTLP 5JPAA 2LPKA 1VQ5P 1Q7YQ 4NEOA 1IMQA 3DS1A 3VRLC 2LIWA 1HY8A 2KODA 2MVVA 1VQ4P 2Z46A 3G0VA 4HKGA 3H4EA 2WPTA 4U0DA 1VQ8P 5BS1A 2N5IA 1N8RQ 1MZ8A 5F2NA 3LRYA 3CMAP 2L0QA 2K0XA 5HGOA 2PEKA 3H0DA 3MGEA 1YIJP 3NY7B 4COPA 2XZ0D 2KGDA 2MR8A 3RG6C 1AUMA 2JAZA 2KG6A 2XV6A 1A43A 3CCJP 3CCSP 1NQ4A 3B5IA 3Q20A 2AF8A 2KOSA 2JB0A 1K73Q 1UNKA 3G21A 2KG9A 2LKIA 1GXGA 2K5XA 2FQ0A 4U0EA 4U0CA 2N98A 3G26A 3I55P 1E6JP 3G1GA 1VQ7P 2M8NA 3P05A 5BS2A 2K2QA 3DS2A 1W2BO 3CXCO 5KP8B 3HZQA 5F2OA 3G29A 1IMPA 2OTJP
chains in the Genus database with same CATH topology
2LL8A 5KP7B 2L22A 2K92A 1L0HA 4BPFA 1DNYA 2LPKA 2AVAA 2JGPA 2CGQA 2LMLA 4NEOA 2K93A 2LIWA 1HY8A 2MVVA 3LMOA 3RG2A 2AFEA 2FHSC 4HKGA 2FADA 2CNRA 1AF8A 2FACA 2L4BA 4H2YC 4PXHB 2MR7A 2N5IA 2N50A 2KOOA 2X2BA 3GZLA 2LIUA 1OR5A 3CE7A 5HV8A 1T8KA 4PWVB 2L0QA 2GDWA 2K0XA 4H2XC 2KR5A 4MRTC 2PNGA 2LOLA 3NY7B 2XZ0D 2KGDA 2GDXA 2MR8A 2XZ1C 2KGCA 3EJBA 2MD9A 2KG6A 2KW2A 4BPGA 2KORA 1NQ4A 1ACPA 2JQ4A 2CQ8A 2EHSA 2N6YA 2AF8A 5CZDB 2KOSA 2KWLA 1X3OA 2M5RA 2KG9A 4IZ6A 2LKIA 2DNWA 3GZMA 2VSQA 4H2WC 1HQBA 2EHTA 2GDYA 1L0IA 1DV5A 2FQ0A 2ROQA 2FVAA 2JU2A 4R0MA 5HVCA 3EJDA 2N6ZA 1KLPA 2N98A 2LTEA 2MY5A 2CG5B 2QNWA 2KGEA 1F80D 2KGAA 2L9FA 2MVUA 4BPHA 4CA3A 4DG9A 2K94A 2K2QA 5KP8B 5KP6B 2N5HA 1VKUA 2KOQA 5EJDA 2FVEA 2JU1A 2FQ1A 2FAEA 2AFDA 2FQ2A 2KOPA 2K0YA 3EJEA 2MF4A 2FVFA 2KG8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LL8 A;  5KP7 B;  2L22 A;  2K92 A;  1L0H A;  4BPF A;  1DNY A;  2LPK A;  2AVA A;  2JGP A;  2CGQ A;  2LML A;  4NEO A;  2K93 A;  2LIW A;  1HY8 A;  2MVV A;  3LMO A;  3RG2 A;  2AFE A;  2FHS C;  4HKG A;  2FAD A;  2CNR A;  1AF8 A;  2FAC A;  2L4B A;  4H2Y C;  4PXH B;  2MR7 A;  2N5I A;  2N50 A;  2KOO A;  2X2B A;  3GZL A;  2LIU A;  1OR5 A;  3CE7 A;  5HV8 A;  1T8K A;  4PWV B;  2L0Q A;  2GDW A;  2K0X A;  4H2X C;  2KR5 A;  4MRT C;  2PNG A;  2LOL A;  3NY7 B;  2XZ0 D;  2KGD A;  2GDX A;  2MR8 A;  2XZ1 C;  2KGC A;  3EJB A;  2MD9 A;  2KG6 A;  2KW2 A;  4BPG A;  2KOR A;  1NQ4 A;  1ACP A;  2JQ4 A;  2CQ8 A;  2EHS A;  2N6Y A;  2AF8 A;  5CZD B;  2KOS A;  2KWL A;  1X3O A;  2M5R A;  2KG9 A;  4IZ6 A;  2LKI A;  2DNW A;  3GZM A;  2VSQ A;  4H2W C;  1HQB A;  2EHT A;  2GDY A;  1L0I A;  1DV5 A;  2FQ0 A;  2ROQ A;  2FVA A;  2JU2 A;  4R0M A;  5HVC A;  3EJD A;  2N6Z A;  1KLP A;  2N98 A;  2LTE A;  2MY5 A;  2CG5 B;  2QNW A;  2KGE A;  1F80 D;  2KGA A;  2L9F A;  2MVU A;  4BPH A;  4CA3 A;  4DG9 A;  2K94 A;  2K2Q A;  5KP8 B;  5KP6 B;  2N5H A;  1VKU A;  2KOQ A;  5EJD A;  2FVE A;  2JU1 A;  2FQ1 A;  2FAE A;  2AFD A;  2FQ2 A;  2KOP A;  2K0Y A;  3EJE A;  2MF4 A;  2FVF A;  2KG8 A; 
#chains in the Genus database with same CATH topology
 2CWO A;  1BAJ A;  1L0H A;  1VQ9 P;  2AVA A;  3E2D A;  3M1M A;  3U43 A;  1VQO P;  3HYB A;  3B4Q A;  5EW5 E;  2AFE A;  4XRO A;  3GKL C;  2FAD A;  1NJI Q;  2P9X A;  1YI2 P;  1JJ2 O;  1AF8 A;  2FAC A;  4F37 A;  4GR6 A;  2Z45 A;  1VHN A;  4PXH B;  4QKO A;  2MR7 A;  1GPJ A;  2N50 A;  2Z44 A;  1IUQ A;  2KOO A;  3GZL A;  1OR5 A;  1T8K A;  1VQN P;  3G6E P;  2KR5 A;  2GDX A;  3EJB A;  1ZMB A;  1YJW P;  2GZJ A;  2JQ4 A;  2M8P A;  3CCM P;  1M6N A;  2OAR A;  3CCL P;  1KC8 Q;  3GZM A;  2VLO A;  2VSQ A;  3WBH A;  3DS4 A;  1L0I A;  2FVA A;  4U0F A;  1YJ9 P;  5HVC A;  2EIA A;  3CCQ P;  2MY5 A;  1RNI A;  1K8A Q;  2QA4 P;  2L9F A;  3H47 A;  2QEX P;  4BPH A;  1Q86 Q;  4QNB A;  2VLN A;  1VKU A;  2KOQ A;  5EJD A;  4GR2 A;  2FVE A;  2AFD A;  2FQ2 A;  1EMV A;  3EJE A;  1Q82 Q;  3DS3 A;  5HGM A;  4BPF A;  3CPW O;  3I56 P;  1VQ6 P;  1BXI A;  2JGP A;  2LML A;  2K93 A;  2GYK A;  5HGN A;  4PH0 A;  3RG2 A;  1QVG O;  2VLP A;  2CNR A;  2JYL A;  2L4B A;  4U0B A;  4H2Y C;  3DPH A;  2GZG A;  2VLQ A;  2E1M A;  2X2B A;  2LIU A;  3G28 A;  1K9M Q;  2JYG A;  2PEJ A;  4MRT C;  2LOL A;  4WYM A;  1ZNV A;  4XFY A;  1YJN P;  2PEM A;  3CCE P;  1RO2 A;  2KW2 A;  2GZF A;  3NTE A;  4BPG A;  2KOR A;  3GJN A;  2EFJ A;  1ACP A;  2PEO A;  2CQ8 A;  2EHS A;  1AYI A;  1EOQ A;  1A8O A;  1VQM P;  1X3O A;  2M5R A;  3CCU P;  4IZ6 A;  4XFX A;  2EHT A;  2GDY A;  3G1I A;  1K30 A;  2JU2 A;  2GZE A;  2N6Z A;  1M1K Q;  1KLP A;  2JO0 A;  2LTE A;  2CG5 B;  3G71 P;  3CC4 P;  2PEI A;  1F80 D;  2KGA A;  2MVU A;  3DS0 A;  3CC2 P;  4CA3 A;  4DG9 A;  1KD1 Q;  1S72 P;  2K94 A;  2PEQ A;  4COC A;  2FAE A;  2LF4 A;  2KG8 A;  3DTJ A;  2LL8 A;  2GZI A;  2L22 A;  1QVF O;  1RO0 A;  1DNY A;  2BHV A;  3DS5 A;  1Z6M A;  5I4T G;  2CGQ A;  3CCR P;  1UJZ A;  2L6E A;  3CME P;  2PY8 A;  1M90 Q;  3LMO A;  2XT1 A;  2FHS C;  2EG5 A;  4PH1 A;  1CEI A;  3CC7 P;  2K0D X;  2ERH A;  1Q81 Q;  2PEN A;  4M0I A;  3CCV P;  3CE7 A;  5HV8 A;  4PWV B;  2GDW A;  2ONT A;  2XXM A;  4H2X C;  5DCK A;  2BUO A;  2PNG A;  2M8L A;  1VQL P;  2XZ1 C;  2KGC A;  2MD9 A;  4XFZ A;  1VQK P;  3G4S P;  3CD6 P;  5HGL A;  1QRJ A;  3OW2 O;  2JBG A;  2N6Y A;  4XRQ A;  5CZD B;  1YIT P;  2KWL A;  2NO8 A;  2DNW A;  1EIA A;  1D1D A;  4H2W C;  1HQB A;  1DV5 A;  5F2K A;  2ROQ A;  4R0M A;  1VQP P;  4UHP B;  3EJD A;  1E0H A;  2QNW A;  2KGE A;  1GXH A;  1KQS O;  4U0A A;  5KP6 B;  1FR2 A;  2N5H A;  4IPY A;  1M74 A;  2JU1 A;  2FQ1 A;  1M6E X;  7CEI A;  2DGY A;  2KOP A;  2K0Y A;  2MF4 A;  1YHQ P;  2FVF A;  5KP7 B;  2K92 A;  2OTL P;  5JPA A;  2LPK A;  1VQ5 P;  1Q7Y Q;  4NEO A;  1IMQ A;  3DS1 A;  3VRL C;  2LIW A;  1HY8 A;  2KOD A;  2MVV A;  1VQ4 P;  2Z46 A;  3G0V A;  4HKG A;  3H4E A;  2WPT A;  4U0D A;  1VQ8 P;  5BS1 A;  2N5I A;  1N8R Q;  1MZ8 A;  5F2N A;  3LRY A;  3CMA P;  2L0Q A;  2K0X A;  5HGO A;  2PEK A;  3H0D A;  3MGE A;  1YIJ P;  3NY7 B;  4COP A;  2XZ0 D;  2KGD A;  2MR8 A;  3RG6 C;  1AUM A;  2JAZ A;  2KG6 A;  2XV6 A;  1A43 A;  3CCJ P;  3CCS P;  1NQ4 A;  3B5I A;  3Q20 A;  2AF8 A;  2KOS A;  2JB0 A;  1K73 Q;  1UNK A;  3G21 A;  2KG9 A;  2LKI A;  1GXG A;  2K5X A;  2FQ0 A;  4U0E A;  4U0C A;  2N98 A;  3G26 A;  3I55 P;  1E6J P;  3G1G A;  1VQ7 P;  2M8N A;  3P05 A;  5BS2 A;  2K2Q A;  3DS2 A;  1W2B O;  3CXC O;  5KP8 B;  3HZQ A;  5F2O A;  3G29 A;  1IMP A;  2OTJ P; 
#chains in the Genus database with same CATH homology
 2LL8 A;  5KP7 B;  2L22 A;  2K92 A;  1L0H A;  4BPF A;  1DNY A;  2LPK A;  2AVA A;  2JGP A;  2CGQ A;  2LML A;  4NEO A;  2K93 A;  2LIW A;  1HY8 A;  2MVV A;  3LMO A;  3RG2 A;  2AFE A;  2FHS C;  4HKG A;  2FAD A;  2CNR A;  1AF8 A;  2FAC A;  2L4B A;  4H2Y C;  4PXH B;  2MR7 A;  2N5I A;  2N50 A;  2KOO A;  2X2B A;  3GZL A;  2LIU A;  1OR5 A;  3CE7 A;  5HV8 A;  1T8K A;  4PWV B;  2L0Q A;  2GDW A;  2K0X A;  4H2X C;  2KR5 A;  4MRT C;  2PNG A;  2LOL A;  3NY7 B;  2XZ0 D;  2KGD A;  2GDX A;  2MR8 A;  2XZ1 C;  2KGC A;  3EJB A;  2MD9 A;  2KG6 A;  2KW2 A;  4BPG A;  2KOR A;  1NQ4 A;  1ACP A;  2JQ4 A;  2CQ8 A;  2EHS A;  2N6Y A;  2AF8 A;  5CZD B;  2KOS A;  2KWL A;  1X3O A;  2M5R A;  2KG9 A;  4IZ6 A;  2LKI A;  2DNW A;  3GZM A;  2VSQ A;  4H2W C;  1HQB A;  2EHT A;  2GDY A;  1L0I A;  1DV5 A;  2FQ0 A;  2ROQ A;  2FVA A;  2JU2 A;  4R0M A;  5HVC A;  3EJD A;  2N6Z A;  1KLP A;  2N98 A;  2LTE A;  2MY5 A;  2CG5 B;  2QNW A;  2KGE A;  1F80 D;  2KGA A;  2L9F A;  2MVU A;  4BPH A;  4CA3 A;  4DG9 A;  2K94 A;  2K2Q A;  5KP8 B;  5KP6 B;  2N5H A;  1VKU A;  2KOQ A;  5EJD A;  2FVE A;  2JU1 A;  2FQ1 A;  2FAE A;  2AFD A;  2FQ2 A;  2KOP A;  2K0Y A;  3EJE A;  2MF4 A;  2FVF A;  2KG8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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