3GTGC

Backtracked rna polymerase ii complex with 12mer rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription, transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
total genus 49
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtgC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtgC01
2Y0SD 2VUMK 2R93K 2WB1L 2R7ZC 1I50C 1SFOC 1YNNA 5M3FK 2A68A 2NVYC 5C4JK 1I3QC 3S2DK 3S16K 4C3IK 3GTLC 2NVQK 4AYBL 3HOVK 4XSZA 3EQLA 4A3LC 3S14C 4MQ9A 2YU9K 3K7AK 1TWCK 4A93K 1XPPA 2Y0SL 4BXXK 4A3CK 4A3EK 4Y52C 3GTKK 3M4OC 5IYBC 4A3KK 3HOXK 1Y1WK 4C3JC 2WAQD 4OIRA 2E2JK 4C3HC 2E2IK 3S2HK 4G7HA 1IW7A 2E2HK 2BE5A 2R7ZK 3HOWC 4A3IK 3GTJC 5FJ8K 2YU9C 4XLNA 2NVYK 1I3QK 3HOYC 4Y7NC 3DXJA 4C2MC 4BBRC 2R92C 2E2JC 4A3GC 3GTLK 4QJVB 3S1NC 4QJVA 1SMYA 3HOZC 2PMZL 2WAQL 3WODA 4OIQA 3S14K 4A3LK 1TWGC 2E2HC 4BY1C 2JA8C 4A3IC 3GTMC 4Y52K 3M4OK 4YFKA 5IYBK 3GTOC 4C3JK 4XLPA 3S1RC 4C3HK 3CQZC 1Y1VC 2PA8D 5FLMC 3HOWK 4XSXA 3GTJK 2CW0A 2NVXC 3GTOK 3HOYK 4Y7NK 3PO3C 4C2MK 4BBSK 4BBRK 4KN7A 2R92K 4A3GK 4LK1A 3S1NK 3S15C 3HOZK 4JK1A 2PPBA 5C44C 1WCMC 1TWGK 4BY1K 2JA8K 3M3YC 2PA8L 3RZOC 3GTMK 2A6HA 3PO2C 4KN4A 4A3FC 4YFXA 1TWAC 1R9TC 4BY7C 1YNJA 4BBSC 5IP7K 3S1RK 3S17C 1TWFC 3S1MK 2NVTC 3CQZK 5M5YK 3GTGC 1Y1VK 2JA6K 5FLMK 4Q4ZA 3S1QC 3GTQC 5C3EC 2NVXK 5C4XC 4KMUA 4A3JK 4A3MC 3PO3K 4Q5SA 5IP9C 4OIPA 3S15K 4OIOA 5IP7C 2JA5C 3S1MC 5C44K 1WCMK 1BDFA 4A3DK 2JA6C 2JA7C 1K83C 2B63C 3M3YK 3RZOK 1TWHC 2O5IA 4G7OA 3PO2K 4NOIA 4A3JC 4A3FK 1R9TK 1TWAK 4BY7K 5D4DA 4LLGA 3H3VD 1TWFK 3HOUC 2NVTK 3S17K 1I6HC 3GTGK 3S1QK 3GTQK 5C3EK 3I4NC 5C4XK 4QIWD 4A3DC 4AYBD 4A3MK 3FKIC 4A3BC 5IYDC 5IP9K 3H0GK 4LJZA 2JA5K 5IYCC 4G7ZA 5M3MK 3H3VL 3GTPC 2JA7K 1K83K 2B63K 3HKZD 1TWHK 3RZDC 4MEXA 4QIWL 1I6VA 2A6EA 5TMCA 3HOUK 4YG2A 1I6HK 3H0GC 4YFNA 2VUMC 4ZH4A 4MEYA 2R93C 2O5JA 5M5XK 3I4MK 3I4NK 4X6AK 5M5WK 2PMZD 5C4JC 3FKIK 3S2DC 3HKZL 4A3BK 3S16C 4C3IC 5IYDK 2NVQC 2WB1D 3HOVC 5IYCK 1I50K 1SFOK 3GTPK 4A93C 1ZYRA 4BXXC 3K7AC 1TWCC 3I4MC 5TMFA 2E2IC 4GZYA 4A3CC 3RZDK 2A69A 4X6AC 4A3EC 3GTKC 4LK0A 4A3KC 3HOXC 1Y1WC 3S2HC 1HQMA 4OINA
chains in the Genus database with same CATH superfamily
4KMHA 2WB1L 2R7ZC 4LQYA 5IORA 3TFJA 1ISEA 1I3QC 3S16K 4C3IK 1JQWA 4GT9A 1R9TA 3LAPA 1TWFA 3GEIA 4U67S 1WSVA 3OPFA 4A3EK 5IYBC 3TFIA 2E2IK 3GTQA 3S2HK 1EQRA 2ZJQS 2E2HK 4KASA 2L3UA 3HOWC 4A3IK 1YX2A 4KB4A 2CFAB 4C2MC 2R92C 2CFAA 1K83A 4QJVB 1XZQB 4QJVA 3HOZC 3S14K 1EK8A 1O2AA 3GTMC 1EH1A 3M4OK 1VJEA 5EGHA 3N3YA 3CQZC 3FKIA 2PA8D 3OEPA 1XXCA 2RGRA 2NVXC 3PO3C 4BBRK 4A3GK 5IOTA 3FOEA 2PPBA 2GAGC 3RZOC 2A6HA 1VH2A 3H0GA 3GTOK 1TWAC 4WFAS 3T02A 3AD7C 5M5YK 1V5VA 2JA6K 5C3EC 1WORA 4KMUA 3GIRA 1ZXOA 3LAJA 4Q5SA 1TWCA 1PJ7A 4GTDA 2XCQA 4OIPA 3S15K 1HI9A 4OIOA 5IP7C 3S1MC 1FEUA 4GTBA 3GTKA 1WCMK 1BDFA 4A3DK 3GDZA 4LR2A 2B63C 3M3YK 1TWHC 4G7OA 4NOIA 1EI6A 2R7ZA 5D4DA 3S17K 1B4BA 2GAHC 1I3QA 1I6HC 3GTGK 4AYBD 4A3MK 5EGEA 1WQHA 4G7ZA 3H3VL 3GTPC 2W7VA 2JA7K 4QIWL 3HXAA 5E68A 1G51A 1L0WA 3HOUK 1DD5A 4ZH4A 4MEYA 1DCPA 5M5XK 2R92A 3I4NK 3ADAC 3S16C 4C3IC 5HL8A 3GTMA 1I50K 3Q3QA 3I4MC 3IPJA 3CQZA 4A3EC 1BJTA 2E2IC 2NVXA 3S2HC 1DCOA 4OINA 4C45A 2Y0SD 2KQ1A 2A68A 3CAGA 4KM8A 4BLBA 4XCHA 2NVQK 3T01A 3HOVK 3EQLA 4KMAA 1TWAA 3S14C 4MQ9A 1WSRA 3K7AK 4KAWX 4BXXK 4GTEA 4A3CK 2FQOA 3M4OC 2XCOA 1WOOA 5JVHS 3HOXK 2E2JK 2WAQD 5HQHA 3N0BA 1VRQC 2GSOA 2YU9C 1F9NA 2D6FC 3DXJA 4BBRC 2B63A 4A3GC 2V6TA 1TWHA 1SMYA 3L4KA 4A3LK 3FHZA 3GTOC 4GTCA 4C3JK 3PIOS 4C3HK 4IO9S 1O29A 4XSXA 3GTJK 3BP3A 5CJ9A 3V4GA 4Y7NK 3GTPA 4KN7A 4LK1A 3S15C 4FM9A 2ZUFA 1WCMC 1J6VA 1TWGK 4BY1K 2JA8K 2XCRB 4WJ3M 3M3YC 2PA8L 4YFXA 1YNJA 4BBSC 3S1RK 3S17C 4GTLA 1DCHA 3GTGC 1Y1VK 1XZQA 5FLMK 4Q4ZA 4GFQA 4P5BA 1WOPA 4A3MC 1X31C 1J6WA 4KM9A 2E2IA 2JA7C 3PO2K 2ZFZA 4A3JC 4A3FK 5JVGS 5DM6S 2ZJRS 1XZPB 3GSIA 3HOUC 1O24A 1XZPA 1O26A 3AQOA 4AH6A 3I4NC 4WF9S 3LYWA 5IP9K 3H0GK 4KDDA 1XXAA 2JA5K 3HKZD 2GSUA 3TTGA 3OREA 4MEXA 2A6EA 2YU9A 1EFWA 5DM7S 3G4CA 3AH5A 5IYDK 1O25A 2NVQC 3HOVC 3GTOA 4BXXC 4BLAA 3K7AC 5TMFA 4A3CC 3L4JA 2A69A 4X6AC 1J98A 3HOXC 2E2JC 5L46A 1WQFA 2VUMK 4G0VA 2R93K 3FOFA 2P5MA 1KQ4A 1SFOC 1WQGA 1YNNA 4KATA 5M3FK 5C4JK 1WCMA 3S2DK 3T00A 4XSZA 4G0WA 4A3LC 1BS2A 2Y0SL 3GTGA 3MMLB 4A3KK 1Y1WK 4C3JC 4OIRA 4C3HC 1RU0A 4BKWA 1AB4A 2BE5A 1BGWA 2V6SA 4P9SA 3GTJC 3N0CA 4XLNA 2NVYK 4GTFA 3DLLS 2EBBA 4Y7NC 2JA7A 3GTLK 2PMZL 4J3NA 2WAQL 3WODA 4OIQA 3VA7A 1TWGC 2E2HC 4BY1C 2JA8C 4A3IC 4O2DA 4Y52K 4YFKA 3GEEA 4XLPA 3S1RC 3PIPS 1Y1VC 5FLMC 2CW0A 2PHCB 4DDQA 5JVOA 3HOYK 1O27A 3LPXA 3S1NK 4RMFA 3AD8C 1XXBA 1PJ6A 2V6UA 4PAAA 3PO2C 4KN4A 4A3FC 1IQ0A 1O28A 5IP7K 3S1MK 3CF5S 1YCLA 4WFBS 3AD9C 1WIHA 5HL7S 5IP9C 2JA5C 5C44K 2FQTA 4P5AA 2JA6C 2KPUA 5TJ3A 1F7UA 4BY7K 1R9TK 1SFOA 4LLGA 1TWFK 1IBAA 2NVTK 3S1QK 3GTQK 3SZYA 5C4XK 4A3DC 4FZBA 1F7VA 5IYDC 5IOSA 4WCES 1K83K 3GEHA 2ZUEA 1I6VA 3GTJA 3A8KA 4YG2A 3I4MK 2VUMC 2R93C 2O5JA 1USMA 5C4JC 1TWGA 3S2DC 3FKIK 3HKZL 4A3BK 2E2HA 2WB1D 4IOCS 5IYCK 1JVIA 4WFNS 1O2FB 2Y3PA 4GZYA 3RZDK 1Y1VA 4ILDA 4A3KC 1Y1WC 3A8IA 1JOEA 1I50C 2NVYC 3S0XA 4PABA 3SZZA 3GTLC 4AYBL 2GSNA 3JSTA 2YU9K 4A93K 1TWCK 1XPPA 4IOAS 1INNA 4Y52C 3GTKK 2L5NA 4G7HA 1IW7A 2R7ZK 5FJ8K 2JA5A 1I3QK 3NUHA 3HOYC 3TFHA 4LOWA 2JA6A 3S1NC 2KWAA 4KARA 4G0UA 1GE9A 2RH6A 5IYBK 4KC6A 1UV7A 1B4AA 4M1XA 2ZJPS 1ZQ1C 3HOWK 4KB2A 1PJ5A 4BBSK 4C2MK 4WILA 2R92K 5CHPA 1J6XA 3HOZK 4JK1A 3ERED 5C44C 3BP8C 1VGXA 1ZVUA 3GTMK 2VUMA 2R93A 4BY7C 1R9TC 1TWFC 2NVTC 1O2BA 3CQZK 2JH3A 3S1QC 3GTQC 4GTAA 1IE0A 2NVXK 5C4XC 4A3JK 3PO3K 5JFEA 1Y1WA 1K83C 3RZOK 2O5IA 1TWAK 1I50A 2P8TA 3H3VD 2NVYA 4WJ4A 3GTLA 5C3EK 4QIWD 4KMDA 2KXYA 3FKIC 4A3BC 1WOSA 4LJZA 5IYCC 5M3MK 2B63K 1TWHK 3QX3A 3RZDC 3G4AA 1C0AA 5TMCA 1I6HK 3H0GC 4YFNA 3BUEA 4X6AK 5M5WK 2PMZD 1VLOA 1USOA 3A8JA 1F93A 1SFOK 5IOQA 3GTPK 4A93C 1ZYRA 1TWCC 3AQPA 1IL2A 1ZBSA 3GTKC 4LK0A 1IS1A 1HQMA
chains in the Genus database with same CATH topology
2Y0SD 2VUMK 2R93K 2WB1L 2R7ZC 1I50C 1SFOC 1YNNA 5M3FK 2A68A 2NVYC 5C4JK 1I3QC 3S2DK 3S16K 4C3IK 3GTLC 2NVQK 4AYBL 3HOVK 4XSZA 3EQLA 4A3LC 3S14C 4MQ9A 2YU9K 3K7AK 1TWCK 4A93K 1XPPA 2Y0SL 4BXXK 4A3CK 4A3EK 4Y52C 3GTKK 3M4OC 5IYBC 4A3KK 3HOXK 1Y1WK 4C3JC 2WAQD 4OIRA 2E2JK 4C3HC 2E2IK 3S2HK 4G7HA 1IW7A 2E2HK 2BE5A 2R7ZK 3HOWC 4A3IK 3GTJC 5FJ8K 2YU9C 4XLNA 2NVYK 1I3QK 3HOYC 4Y7NC 3DXJA 4C2MC 4BBRC 2R92C 2E2JC 4A3GC 3GTLK 4QJVB 3S1NC 4QJVA 1SMYA 3HOZC 2PMZL 2WAQL 3WODA 4OIQA 3S14K 4A3LK 1TWGC 2E2HC 4BY1C 2JA8C 4A3IC 3GTMC 4Y52K 3M4OK 4YFKA 5IYBK 3GTOC 4C3JK 4XLPA 3S1RC 4C3HK 3CQZC 1Y1VC 2PA8D 5FLMC 3HOWK 4XSXA 3GTJK 2CW0A 2NVXC 3GTOK 3HOYK 4Y7NK 3PO3C 4C2MK 4BBSK 4BBRK 4KN7A 2R92K 4A3GK 4LK1A 3S1NK 3S15C 3HOZK 4JK1A 2PPBA 5C44C 1WCMC 1TWGK 4BY1K 2JA8K 3M3YC 2PA8L 3RZOC 3GTMK 2A6HA 3PO2C 4KN4A 4A3FC 4YFXA 1TWAC 1R9TC 4BY7C 1YNJA 4BBSC 5IP7K 3S1RK 3S17C 1TWFC 3S1MK 2NVTC 3CQZK 5M5YK 3GTGC 1Y1VK 2JA6K 5FLMK 4Q4ZA 3S1QC 3GTQC 5C3EC 2NVXK 5C4XC 4KMUA 4A3JK 4A3MC 3PO3K 4Q5SA 5IP9C 4OIPA 3S15K 4OIOA 5IP7C 2JA5C 3S1MC 5C44K 1WCMK 1BDFA 4A3DK 2JA6C 2JA7C 1K83C 2B63C 3M3YK 3RZOK 1TWHC 2O5IA 4G7OA 3PO2K 4NOIA 4A3JC 4A3FK 1R9TK 1TWAK 4BY7K 5D4DA 4LLGA 3H3VD 1TWFK 3HOUC 2NVTK 3S17K 1I6HC 3GTGK 3S1QK 3GTQK 5C3EK 3I4NC 5C4XK 4QIWD 4A3DC 4AYBD 4A3MK 3FKIC 4A3BC 5IYDC 5IP9K 3H0GK 4LJZA 2JA5K 5IYCC 4G7ZA 5M3MK 3H3VL 3GTPC 2JA7K 1K83K 2B63K 3HKZD 1TWHK 3RZDC 4MEXA 4QIWL 1I6VA 2A6EA 5TMCA 3HOUK 4YG2A 1I6HK 3H0GC 4YFNA 2VUMC 4ZH4A 4MEYA 2R93C 2O5JA 5M5XK 3I4MK 3I4NK 4X6AK 5M5WK 2PMZD 5C4JC 3FKIK 3S2DC 3HKZL 4A3BK 3S16C 4C3IC 5IYDK 2NVQC 2WB1D 3HOVC 5IYCK 1I50K 1SFOK 3GTPK 4A93C 1ZYRA 4BXXC 3K7AC 1TWCC 3I4MC 5TMFA 2E2IC 4GZYA 4A3CC 3RZDK 2A69A 4X6AC 4A3EC 3GTKC 4LK0A 4A3KC 3HOXC 1Y1WC 3S2HC 1HQMA 4OINA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Y0S D;  2VUM K;  2R93 K;  2WB1 L;  2R7Z C;  1I50 C;  1SFO C;  1YNN A;  5M3F K;  2A68 A;  2NVY C;  5C4J K;  1I3Q C;  3S2D K;  3S16 K;  4C3I K;  3GTL C;  2NVQ K;  4AYB L;  3HOV K;  4XSZ A;  3EQL A;  4A3L C;  3S14 C;  4MQ9 A;  2YU9 K;  3K7A K;  1TWC K;  4A93 K;  1XPP A;  2Y0S L;  4BXX K;  4A3C K;  4A3E K;  4Y52 C;  3GTK K;  3M4O C;  5IYB C;  4A3K K;  3HOX K;  1Y1W K;  4C3J C;  2WAQ D;  4OIR A;  2E2J K;  4C3H C;  2E2I K;  3S2H K;  4G7H A;  1IW7 A;  2E2H K;  2BE5 A;  2R7Z K;  3HOW C;  4A3I K;  3GTJ C;  5FJ8 K;  2YU9 C;  4XLN A;  2NVY K;  1I3Q K;  3HOY C;  4Y7N C;  3DXJ A;  4C2M C;  4BBR C;  2R92 C;  2E2J C;  4A3G C;  3GTL K;  4QJV B;  3S1N C;  4QJV A;  1SMY A;  3HOZ C;  2PMZ L;  2WAQ L;  3WOD A;  4OIQ A;  3S14 K;  4A3L K;  1TWG C;  2E2H C;  4BY1 C;  2JA8 C;  4A3I C;  3GTM C;  4Y52 K;  3M4O K;  4YFK A;  5IYB K;  3GTO C;  4C3J K;  4XLP A;  3S1R C;  4C3H K;  3CQZ C;  1Y1V C;  2PA8 D;  5FLM C;  3HOW K;  4XSX A;  3GTJ K;  2CW0 A;  2NVX C;  3GTO K;  3HOY K;  4Y7N K;  3PO3 C;  4C2M K;  4BBS K;  4BBR K;  4KN7 A;  2R92 K;  4A3G K;  4LK1 A;  3S1N K;  3S15 C;  3HOZ K;  4JK1 A;  2PPB A;  5C44 C;  1WCM C;  1TWG K;  4BY1 K;  2JA8 K;  3M3Y C;  2PA8 L;  3RZO C;  3GTM K;  2A6H A;  3PO2 C;  4KN4 A;  4A3F C;  4YFX A;  1TWA C;  1R9T C;  4BY7 C;  1YNJ A;  4BBS C;  5IP7 K;  3S1R K;  3S17 C;  1TWF C;  3S1M K;  2NVT C;  3CQZ K;  5M5Y K;  3GTG C;  1Y1V K;  2JA6 K;  5FLM K;  4Q4Z A;  3S1Q C;  3GTQ C;  5C3E C;  2NVX K;  5C4X C;  4KMU A;  4A3J K;  4A3M C;  3PO3 K;  4Q5S A;  5IP9 C;  4OIP A;  3S15 K;  4OIO A;  5IP7 C;  2JA5 C;  3S1M C;  5C44 K;  1WCM K;  1BDF A;  4A3D K;  2JA6 C;  2JA7 C;  1K83 C;  2B63 C;  3M3Y K;  3RZO K;  1TWH C;  2O5I A;  4G7O A;  3PO2 K;  4NOI A;  4A3J C;  4A3F K;  1R9T K;  1TWA K;  4BY7 K;  5D4D A;  4LLG A;  3H3V D;  1TWF K;  3HOU C;  2NVT K;  3S17 K;  1I6H C;  3GTG K;  3S1Q K;  3GTQ K;  5C3E K;  3I4N C;  5C4X K;  4QIW D;  4A3D C;  4AYB D;  4A3M K;  3FKI C;  4A3B C;  5IYD C;  5IP9 K;  3H0G K;  4LJZ A;  2JA5 K;  5IYC C;  4G7Z A;  5M3M K;  3H3V L;  3GTP C;  2JA7 K;  1K83 K;  2B63 K;  3HKZ D;  1TWH K;  3RZD C;  4MEX A;  4QIW L;  1I6V A;  2A6E A;  5TMC A;  3HOU K;  4YG2 A;  1I6H K;  3H0G C;  4YFN A;  2VUM C;  4ZH4 A;  4MEY A;  2R93 C;  2O5J A;  5M5X K;  3I4M K;  3I4N K;  4X6A K;  5M5W K;  2PMZ D;  5C4J C;  3FKI K;  3S2D C;  3HKZ L;  4A3B K;  3S16 C;  4C3I C;  5IYD K;  2NVQ C;  2WB1 D;  3HOV C;  5IYC K;  1I50 K;  1SFO K;  3GTP K;  4A93 C;  1ZYR A;  4BXX C;  3K7A C;  1TWC C;  3I4M C;  5TMF A;  2E2I C;  4GZY A;  4A3C C;  3RZD K;  2A69 A;  4X6A C;  4A3E C;  3GTK C;  4LK0 A;  4A3K C;  3HOX C;  1Y1W C;  3S2H C;  1HQM A;  4OIN A; 
#chains in the Genus database with same CATH topology
 4KMH A;  2WB1 L;  2R7Z C;  4LQY A;  5IOR A;  3TFJ A;  1ISE A;  1I3Q C;  3S16 K;  4C3I K;  1JQW A;  4GT9 A;  1R9T A;  3LAP A;  1TWF A;  3GEI A;  4U67 S;  1WSV A;  3OPF A;  4A3E K;  5IYB C;  3TFI A;  2E2I K;  3GTQ A;  3S2H K;  1EQR A;  2ZJQ S;  2E2H K;  4KAS A;  2L3U A;  3HOW C;  4A3I K;  1YX2 A;  4KB4 A;  2CFA B;  4C2M C;  2R92 C;  2CFA A;  1K83 A;  4QJV B;  1XZQ B;  4QJV A;  3HOZ C;  3S14 K;  1EK8 A;  1O2A A;  3GTM C;  1EH1 A;  3M4O K;  1VJE A;  5EGH A;  3N3Y A;  3CQZ C;  3FKI A;  2PA8 D;  3OEP A;  1XXC A;  2RGR A;  2NVX C;  3PO3 C;  4BBR K;  4A3G K;  5IOT A;  3FOE A;  2PPB A;  2GAG C;  3RZO C;  2A6H A;  1VH2 A;  3H0G A;  3GTO K;  1TWA C;  4WFA S;  3T02 A;  3AD7 C;  5M5Y K;  1V5V A;  2JA6 K;  5C3E C;  1WOR A;  4KMU A;  3GIR A;  1ZXO A;  3LAJ A;  4Q5S A;  1TWC A;  1PJ7 A;  4GTD A;  2XCQ A;  4OIP A;  3S15 K;  1HI9 A;  4OIO A;  5IP7 C;  3S1M C;  1FEU A;  4GTB A;  3GTK A;  1WCM K;  1BDF A;  4A3D K;  3GDZ A;  4LR2 A;  2B63 C;  3M3Y K;  1TWH C;  4G7O A;  4NOI A;  1EI6 A;  2R7Z A;  5D4D A;  3S17 K;  1B4B A;  2GAH C;  1I3Q A;  1I6H C;  3GTG K;  4AYB D;  4A3M K;  5EGE A;  1WQH A;  4G7Z A;  3H3V L;  3GTP C;  2W7V A;  2JA7 K;  4QIW L;  3HXA A;  5E68 A;  1G51 A;  1L0W A;  3HOU K;  1DD5 A;  4ZH4 A;  4MEY A;  1DCP A;  5M5X K;  2R92 A;  3I4N K;  3ADA C;  3S16 C;  4C3I C;  5HL8 A;  3GTM A;  1I50 K;  3Q3Q A;  3I4M C;  3IPJ A;  3CQZ A;  4A3E C;  1BJT A;  2E2I C;  2NVX A;  3S2H C;  1DCO A;  4OIN A;  4C45 A;  2Y0S D;  2KQ1 A;  2A68 A;  3CAG A;  4KM8 A;  4BLB A;  4XCH A;  2NVQ K;  3T01 A;  3HOV K;  3EQL A;  4KMA A;  1TWA A;  3S14 C;  4MQ9 A;  1WSR A;  3K7A K;  4KAW X;  4BXX K;  4GTE A;  4A3C K;  2FQO A;  3M4O C;  2XCO A;  1WOO A;  5JVH S;  3HOX K;  2E2J K;  2WAQ D;  5HQH A;  3N0B A;  1VRQ C;  2GSO A;  2YU9 C;  1F9N A;  2D6F C;  3DXJ A;  4BBR C;  2B63 A;  4A3G C;  2V6T A;  1TWH A;  1SMY A;  3L4K A;  4A3L K;  3FHZ A;  3GTO C;  4GTC A;  4C3J K;  3PIO S;  4C3H K;  4IO9 S;  1O29 A;  4XSX A;  3GTJ K;  3BP3 A;  5CJ9 A;  3V4G A;  4Y7N K;  3GTP A;  4KN7 A;  4LK1 A;  3S15 C;  4FM9 A;  2ZUF A;  1WCM C;  1J6V A;  1TWG K;  4BY1 K;  2JA8 K;  2XCR B;  4WJ3 M;  3M3Y C;  2PA8 L;  4YFX A;  1YNJ A;  4BBS C;  3S1R K;  3S17 C;  4GTL A;  1DCH A;  3GTG C;  1Y1V K;  1XZQ A;  5FLM K;  4Q4Z A;  4GFQ A;  4P5B A;  1WOP A;  4A3M C;  1X31 C;  1J6W A;  4KM9 A;  2E2I A;  2JA7 C;  3PO2 K;  2ZFZ A;  4A3J C;  4A3F K;  5JVG S;  5DM6 S;  2ZJR S;  1XZP B;  3GSI A;  3HOU C;  1O24 A;  1XZP A;  1O26 A;  3AQO A;  4AH6 A;  3I4N C;  4WF9 S;  3LYW A;  5IP9 K;  3H0G K;  4KDD A;  1XXA A;  2JA5 K;  3HKZ D;  2GSU A;  3TTG A;  3ORE A;  4MEX A;  2A6E A;  2YU9 A;  1EFW A;  5DM7 S;  3G4C A;  3AH5 A;  5IYD K;  1O25 A;  2NVQ C;  3HOV C;  3GTO A;  4BXX C;  4BLA A;  3K7A C;  5TMF A;  4A3C C;  3L4J A;  2A69 A;  4X6A C;  1J98 A;  3HOX C;  2E2J C;  5L46 A;  1WQF A;  2VUM K;  4G0V A;  2R93 K;  3FOF A;  2P5M A;  1KQ4 A;  1SFO C;  1WQG A;  1YNN A;  4KAT A;  5M3F K;  5C4J K;  1WCM A;  3S2D K;  3T00 A;  4XSZ A;  4G0W A;  4A3L C;  1BS2 A;  2Y0S L;  3GTG A;  3MML B;  4A3K K;  1Y1W K;  4C3J C;  4OIR A;  4C3H C;  1RU0 A;  4BKW A;  1AB4 A;  2BE5 A;  1BGW A;  2V6S A;  4P9S A;  3GTJ C;  3N0C A;  4XLN A;  2NVY K;  4GTF A;  3DLL S;  2EBB A;  4Y7N C;  2JA7 A;  3GTL K;  2PMZ L;  4J3N A;  2WAQ L;  3WOD A;  4OIQ A;  3VA7 A;  1TWG C;  2E2H C;  4BY1 C;  2JA8 C;  4A3I C;  4O2D A;  4Y52 K;  4YFK A;  3GEE A;  4XLP A;  3S1R C;  3PIP S;  1Y1V C;  5FLM C;  2CW0 A;  2PHC B;  4DDQ A;  5JVO A;  3HOY K;  1O27 A;  3LPX A;  3S1N K;  4RMF A;  3AD8 C;  1XXB A;  1PJ6 A;  2V6U A;  4PAA A;  3PO2 C;  4KN4 A;  4A3F C;  1IQ0 A;  1O28 A;  5IP7 K;  3S1M K;  3CF5 S;  1YCL A;  4WFB S;  3AD9 C;  1WIH A;  5HL7 S;  5IP9 C;  2JA5 C;  5C44 K;  2FQT A;  4P5A A;  2JA6 C;  2KPU A;  5TJ3 A;  1F7U A;  4BY7 K;  1R9T K;  1SFO A;  4LLG A;  1TWF K;  1IBA A;  2NVT K;  3S1Q K;  3GTQ K;  3SZY A;  5C4X K;  4A3D C;  4FZB A;  1F7V A;  5IYD C;  5IOS A;  4WCE S;  1K83 K;  3GEH A;  2ZUE A;  1I6V A;  3GTJ A;  3A8K A;  4YG2 A;  3I4M K;  2VUM C;  2R93 C;  2O5J A;  1USM A;  5C4J C;  1TWG A;  3S2D C;  3FKI K;  3HKZ L;  4A3B K;  2E2H A;  2WB1 D;  4IOC S;  5IYC K;  1JVI A;  4WFN S;  1O2F B;  2Y3P A;  4GZY A;  3RZD K;  1Y1V A;  4ILD A;  4A3K C;  1Y1W C;  3A8I A;  1JOE A;  1I50 C;  2NVY C;  3S0X A;  4PAB A;  3SZZ A;  3GTL C;  4AYB L;  2GSN A;  3JST A;  2YU9 K;  4A93 K;  1TWC K;  1XPP A;  4IOA S;  1INN A;  4Y52 C;  3GTK K;  2L5N A;  4G7H A;  1IW7 A;  2R7Z K;  5FJ8 K;  2JA5 A;  1I3Q K;  3NUH A;  3HOY C;  3TFH A;  4LOW A;  2JA6 A;  3S1N C;  2KWA A;  4KAR A;  4G0U A;  1GE9 A;  2RH6 A;  5IYB K;  4KC6 A;  1UV7 A;  1B4A A;  4M1X A;  2ZJP S;  1ZQ1 C;  3HOW K;  4KB2 A;  1PJ5 A;  4BBS K;  4C2M K;  4WIL A;  2R92 K;  5CHP A;  1J6X A;  3HOZ K;  4JK1 A;  3ERE D;  5C44 C;  3BP8 C;  1VGX A;  1ZVU A;  3GTM K;  2VUM A;  2R93 A;  4BY7 C;  1R9T C;  1TWF C;  2NVT C;  1O2B A;  3CQZ K;  2JH3 A;  3S1Q C;  3GTQ C;  4GTA A;  1IE0 A;  2NVX K;  5C4X C;  4A3J K;  3PO3 K;  5JFE A;  1Y1W A;  1K83 C;  3RZO K;  2O5I A;  1TWA K;  1I50 A;  2P8T A;  3H3V D;  2NVY A;  4WJ4 A;  3GTL A;  5C3E K;  4QIW D;  4KMD A;  2KXY A;  3FKI C;  4A3B C;  1WOS A;  4LJZ A;  5IYC C;  5M3M K;  2B63 K;  1TWH K;  3QX3 A;  3RZD C;  3G4A A;  1C0A A;  5TMC A;  1I6H K;  3H0G C;  4YFN A;  3BUE A;  4X6A K;  5M5W K;  2PMZ D;  1VLO A;  1USO A;  3A8J A;  1F93 A;  1SFO K;  5IOQ A;  3GTP K;  4A93 C;  1ZYR A;  1TWC C;  3AQP A;  1IL2 A;  1ZBS A;  3GTK C;  4LK0 A;  1IS1 A;  1HQM A; 
#chains in the Genus database with same CATH homology
 2Y0S D;  2VUM K;  2R93 K;  2WB1 L;  2R7Z C;  1I50 C;  1SFO C;  1YNN A;  5M3F K;  2A68 A;  2NVY C;  5C4J K;  1I3Q C;  3S2D K;  3S16 K;  4C3I K;  3GTL C;  2NVQ K;  4AYB L;  3HOV K;  4XSZ A;  3EQL A;  4A3L C;  3S14 C;  4MQ9 A;  2YU9 K;  3K7A K;  1TWC K;  4A93 K;  1XPP A;  2Y0S L;  4BXX K;  4A3C K;  4A3E K;  4Y52 C;  3GTK K;  3M4O C;  5IYB C;  4A3K K;  3HOX K;  1Y1W K;  4C3J C;  2WAQ D;  4OIR A;  2E2J K;  4C3H C;  2E2I K;  3S2H K;  4G7H A;  1IW7 A;  2E2H K;  2BE5 A;  2R7Z K;  3HOW C;  4A3I K;  3GTJ C;  5FJ8 K;  2YU9 C;  4XLN A;  2NVY K;  1I3Q K;  3HOY C;  4Y7N C;  3DXJ A;  4C2M C;  4BBR C;  2R92 C;  2E2J C;  4A3G C;  3GTL K;  4QJV B;  3S1N C;  4QJV A;  1SMY A;  3HOZ C;  2PMZ L;  2WAQ L;  3WOD A;  4OIQ A;  3S14 K;  4A3L K;  1TWG C;  2E2H C;  4BY1 C;  2JA8 C;  4A3I C;  3GTM C;  4Y52 K;  3M4O K;  4YFK A;  5IYB K;  3GTO C;  4C3J K;  4XLP A;  3S1R C;  4C3H K;  3CQZ C;  1Y1V C;  2PA8 D;  5FLM C;  3HOW K;  4XSX A;  3GTJ K;  2CW0 A;  2NVX C;  3GTO K;  3HOY K;  4Y7N K;  3PO3 C;  4C2M K;  4BBS K;  4BBR K;  4KN7 A;  2R92 K;  4A3G K;  4LK1 A;  3S1N K;  3S15 C;  3HOZ K;  4JK1 A;  2PPB A;  5C44 C;  1WCM C;  1TWG K;  4BY1 K;  2JA8 K;  3M3Y C;  2PA8 L;  3RZO C;  3GTM K;  2A6H A;  3PO2 C;  4KN4 A;  4A3F C;  4YFX A;  1TWA C;  1R9T C;  4BY7 C;  1YNJ A;  4BBS C;  5IP7 K;  3S1R K;  3S17 C;  1TWF C;  3S1M K;  2NVT C;  3CQZ K;  5M5Y K;  3GTG C;  1Y1V K;  2JA6 K;  5FLM K;  4Q4Z A;  3S1Q C;  3GTQ C;  5C3E C;  2NVX K;  5C4X C;  4KMU A;  4A3J K;  4A3M C;  3PO3 K;  4Q5S A;  5IP9 C;  4OIP A;  3S15 K;  4OIO A;  5IP7 C;  2JA5 C;  3S1M C;  5C44 K;  1WCM K;  1BDF A;  4A3D K;  2JA6 C;  2JA7 C;  1K83 C;  2B63 C;  3M3Y K;  3RZO K;  1TWH C;  2O5I A;  4G7O A;  3PO2 K;  4NOI A;  4A3J C;  4A3F K;  1R9T K;  1TWA K;  4BY7 K;  5D4D A;  4LLG A;  3H3V D;  1TWF K;  3HOU C;  2NVT K;  3S17 K;  1I6H C;  3GTG K;  3S1Q K;  3GTQ K;  5C3E K;  3I4N C;  5C4X K;  4QIW D;  4A3D C;  4AYB D;  4A3M K;  3FKI C;  4A3B C;  5IYD C;  5IP9 K;  3H0G K;  4LJZ A;  2JA5 K;  5IYC C;  4G7Z A;  5M3M K;  3H3V L;  3GTP C;  2JA7 K;  1K83 K;  2B63 K;  3HKZ D;  1TWH K;  3RZD C;  4MEX A;  4QIW L;  1I6V A;  2A6E A;  5TMC A;  3HOU K;  4YG2 A;  1I6H K;  3H0G C;  4YFN A;  2VUM C;  4ZH4 A;  4MEY A;  2R93 C;  2O5J A;  5M5X K;  3I4M K;  3I4N K;  4X6A K;  5M5W K;  2PMZ D;  5C4J C;  3FKI K;  3S2D C;  3HKZ L;  4A3B K;  3S16 C;  4C3I C;  5IYD K;  2NVQ C;  2WB1 D;  3HOV C;  5IYC K;  1I50 K;  1SFO K;  3GTP K;  4A93 C;  1ZYR A;  4BXX C;  3K7A C;  1TWC C;  3I4M C;  5TMF A;  2E2I C;  4GZY A;  4A3C C;  3RZD K;  2A69 A;  4X6A C;  4A3E C;  3GTK C;  4LK0 A;  4A3K C;  3HOX C;  1Y1W C;  3S2H C;  1HQM A;  4OIN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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