3H9MA

Crystal structure of para-aminobenzoate synthetase, component i from cytophaga hutchinsonii
Total Genus 126
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
425
structure length
399
Chain Sequence
SLSFTPLHTTSEAFIEKALPWLEDRYFHIAYLNPNGYTAYPQGAFRHYLAFGSEAAIHVSDATRVFETWNEIKKGYTNEWIFVFASYDGKNSVEQLHTSKEAGIAFAAATFFIPEHVWEIQPDGILIHKGSGSSLVTEIQHAQSDIFVKQVVSKESYFNAFDELQQIIAQGDAYEINYCIPFTAKGNISPAATYQRLNKKTPMPFSVYYKFNTEYILSASPERFIKKTGDTIISQPIKGTSEKEQSENTMIVDLVRNDLSRTAVAGSVCVPELSGLYTFPNVHQLISTVQSTIDPACSSIDVIQQAFPMGSMTGAPKVNVMKFIDRIESMARGPFSGTVGYMDPHDNFDFNVLIRSIFYNSATQELFMEAGSAITSYAKAETEYEECLLKITPMIHILN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords p-aminobenzoate synthetase, component I
publication title Crystal structure of para-aminobenzoate synthetase, component I from Cytophaga hutchinsonii
rcsb
source organism Cytophaga hutchinsonii atcc 33406
total genus 126
structure length 399
sequence length 425
ec nomenclature ec 4.1.3.-:
pdb deposition date 2009-04-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00425 Chorismate_bind chorismate binding enzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.120.10 Alpha Beta 4-Layer Sandwich Anthranilate synthase Anthranilate synthase 3h9mA00
3R74A 2G5FA 5JY9A 3VEHA 2EUAA 1QDLA 1I1QA 5JY8A 3RV7A 5JZDA 5JY4B 3HWOA 3LOGA 2FN0A 3R75A 3ST6A 3BZNA 1I7SA 3RV8A 5JXZA 2FN1A 3H9MA 1K0GA 4GRHA 3GSEA 3OS6A 3RV6A 5JY4A 1I7QA 2I6YA 3BZMA 3RV9A 3R76A 5CWAA 1K0EA 5KCKA
chains in the Genus database with same CATH superfamily
3R74A 2G5FA 5JY9A 3VEHA 2EUAA 1QDLA 1I1QA 5JY8A 3RV7A 5JZDA 5JY4B 3HWOA 3LOGA 2FN0A 3R75A 3ST6A 3BZNA 1I7SA 3RV8A 5JXZA 2FN1A 3H9MA 1K0GA 4GRHA 3GSEA 3OS6A 3RV6A 5JY4A 1I7QA 2I6YA 3BZMA 3RV9A 3R76A 5CWAA 1K0EA 5KCKA
chains in the Genus database with same CATH topology
3R74A 2G5FA 5JY9A 3VEHA 2EUAA 1QDLA 1I1QA 5JY8A 3RV7A 5JZDA 5JY4B 3HWOA 3LOGA 2FN0A 3R75A 3ST6A 3BZNA 1I7SA 3RV8A 5JXZA 2FN1A 3H9MA 1K0GA 4GRHA 3GSEA 3OS6A 3RV6A 5JY4A 1I7QA 2I6YA 3BZMA 3RV9A 3R76A 5CWAA 1K0EA 5KCKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3R74 A;  2G5F A;  5JY9 A;  3VEH A;  2EUA A;  1QDL A;  1I1Q A;  5JY8 A;  3RV7 A;  5JZD A;  5JY4 B;  3HWO A;  3LOG A;  2FN0 A;  3R75 A;  3ST6 A;  3BZN A;  1I7S A;  3RV8 A;  5JXZ A;  2FN1 A;  3H9M A;  1K0G A;  4GRH A;  3GSE A;  3OS6 A;  3RV6 A;  5JY4 A;  1I7Q A;  2I6Y A;  3BZM A;  3RV9 A;  3R76 A;  5CWA A;  1K0E A;  5KCK A; 
#chains in the Genus database with same CATH topology
 3R74 A;  2G5F A;  5JY9 A;  3VEH A;  2EUA A;  1QDL A;  1I1Q A;  5JY8 A;  3RV7 A;  5JZD A;  5JY4 B;  3HWO A;  3LOG A;  2FN0 A;  3R75 A;  3ST6 A;  3BZN A;  1I7S A;  3RV8 A;  5JXZ A;  2FN1 A;  3H9M A;  1K0G A;  4GRH A;  3GSE A;  3OS6 A;  3RV6 A;  5JY4 A;  1I7Q A;  2I6Y A;  3BZM A;  3RV9 A;  3R76 A;  5CWA A;  1K0E A;  5KCK A; 
#chains in the Genus database with same CATH homology
 3R74 A;  2G5F A;  5JY9 A;  3VEH A;  2EUA A;  1QDL A;  1I1Q A;  5JY8 A;  3RV7 A;  5JZD A;  5JY4 B;  3HWO A;  3LOG A;  2FN0 A;  3R75 A;  3ST6 A;  3BZN A;  1I7S A;  3RV8 A;  5JXZ A;  2FN1 A;  3H9M A;  1K0G A;  4GRH A;  3GSE A;  3OS6 A;  3RV6 A;  5JY4 A;  1I7Q A;  2I6Y A;  3BZM A;  3RV9 A;  3R76 A;  5CWA A;  1K0E A;  5KCK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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