3JZTA

Structure of a cubic crystal form of x (adrp) domain from fcov with adp-ribose
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
168
structure length
168
Chain Sequence
DLILPFYKAGKVSFYQGDLDVLINFLEPDVLVNAANGDLRHVGGVARAIDVFTGGKLTKRSKEYLKSSKAIAPGNAVLFENVLEHLSVLNAVGPRNGDSRVEGKLCNVYKAIAKCDGKILTPLISVGIFKVKLEVSLQCLLKTVTDRDLNVFVYTDQERVTIENFFNG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Rna binding protein
molecule keywords macro domain of Non-structural protein 3
publication title Structure of the X (ADRP) domain of nsp3 from feline coronavirus
pubmed doi rcsb
source organism Feline coronavirus
total genus 52
structure length 168
sequence length 168
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 2.7.7.48: RNA-directed RNA polymerase.
pdb deposition date 2009-09-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3jztA00
4KSIA 1BLLE 4ESSA 4R7MA 5AILA 4ZY1A 5CB5A 4J4ZA 1LAMA 3KQXA 3GQOA 4ABLA 1VHUA 3EWQA 4J5QA 3SIJA 1YD9A 2EEEA 4KYBA 3ETIA 4ZI6A 4K3NA 3IJ3A 1TY8A 3SIGA 4J5RA 4K0CA 3V2BA 3VFQA 3EKEA 4ETJA 3H8FA 2X47A 3IIDA 4X2TA 5DUSA 5HIHA 4JCAA 3SIHA 5E3BA 1TXZA 4ZX8A 3EJFA 4ZY2A 3IIFA 4J5SA 4ABKA 4GVWA 4JLLA 4JVVA 3EWRA 1LANA 3KR5A 3T8WA 5CB3A 2FAVA 4ZY0A 5FSYA 3V45A 1BPNA 5CBMA 1HJZA 4R76A 1ZR5A 3EW5A 3EJGA 2FXKA 3GPGA 1LAPA 1ZR3A 1NJRA 2VRIA 5FSVA 4GVVA 3KZWA 4IQYA 3GPQA 4GUAA 4ZYQA 1SPVA 2LGRA 2J9AA 2BFRA 1GYTA 4R6TA 5CMSA 2DX6A 1LCPA 3KQZA 3Q6ZA 3H8EA 3JZTA 4UMLA 5FSZA 4TU0A 2ACFA 5FSUA 3KR4A 5FSXA 2BFQA 4ZX9A 3EWOA 3GPOA 3PEIA 4JGKA 2FG1A 3EWPA 2XD7A 2AFCA 4D86A 2EWBA 3H8GA 3SIIA 3GQEA 2L8RA 1BPMA 3Q71A 3JRUA 5HOLA 4ETKA 5D8NA
chains in the Genus database with same CATH superfamily
4KSIA 2KQVA 1BLLE 4ESSA 4R7MA 5AILA 4ZY1A 5CB5A 2W2GA 4J4ZA 1LAMA 3KQXA 3GQOA 4ABLA 1VHUA 3EWQA 4J5QA 3SIJA 1YD9A 2EEEA 4KYBA 3ETIA 4ZI6A 4K3NA 3IJ3A 1TY8A 3SIGA 4J5RA 4K0CA 3V2BA 3VFQA 3EKEA 4ETJA 3H8FA 2X47A 3IIDA 4X2TA 5DUSA 5HIHA 4JCAA 3SIHA 5E3BA 1TXZA 4ZX8A 3EJFA 4ZY2A 3IIFA 4J5SA 4ABKA 4GVWA 2JZFA 4JLLA 4JVVA 3EWRA 1LANA 3KR5A 3T8WA 5CB3A 2FAVA 4ZY0A 5FSYA 3V45A 1BPNA 5CBMA 1HJZA 4R76A 1ZR5A 3EW5A 3EJGA 2FXKA 3GPGA 1LAPA 2WCTA 1ZR3A 2JZEA 1NJRA 2VRIA 5FSVA 4GVVA 3KZWA 4IQYA 3GPQA 4GUAA 4ZYQA 1SPVA 2LGRA 2J9AA 2BFRA 1GYTA 4R6TA 5CMSA 2DX6A 1LCPA 3KQZA 3Q6ZA 3H8EA 3JZTA 4UMLA 5FSZA 4TU0A 2ACFA 5FSUA 3KR4A 5FSXA 2BFQA 4ZX9A 3EWOA 3GPOA 3PEIA 4JGKA 2FG1A 3EWPA 2XD7A 2JZDA 2AFCA 4D86A 2EWBA 3H8GA 3SIIA 3GQEA 2L8RA 1BPMA 3Q71A 3JRUA 5HOLA 4ETKA 2RNKA 5D8NA
chains in the Genus database with same CATH topology
4KSIA 1BLLE 4ESSA 4R7MA 5AILA 4ZY1A 5CB5A 4J4ZA 1LAMA 3KQXA 3GQOA 4ABLA 1VHUA 3EWQA 4J5QA 3SIJA 1YD9A 2EEEA 4KYBA 3ETIA 4ZI6A 4K3NA 3IJ3A 1TY8A 3SIGA 4J5RA 4K0CA 3V2BA 3VFQA 3EKEA 4ETJA 3H8FA 2X47A 3IIDA 4X2TA 5DUSA 5HIHA 4JCAA 3SIHA 5E3BA 1TXZA 4ZX8A 3EJFA 4ZY2A 3IIFA 4J5SA 4ABKA 4GVWA 4JLLA 4JVVA 3EWRA 1LANA 3KR5A 3T8WA 5CB3A 2FAVA 4ZY0A 5FSYA 3V45A 1BPNA 5CBMA 1HJZA 4R76A 1ZR5A 3EW5A 3EJGA 2FXKA 3GPGA 1LAPA 1ZR3A 1NJRA 2VRIA 5FSVA 4GVVA 3KZWA 4IQYA 3GPQA 4GUAA 4ZYQA 1SPVA 2LGRA 2J9AA 2BFRA 1GYTA 4R6TA 5CMSA 2DX6A 1LCPA 3KQZA 3Q6ZA 3H8EA 3JZTA 4UMLA 5FSZA 4TU0A 2ACFA 5FSUA 3KR4A 5FSXA 2BFQA 4ZX9A 3EWOA 3GPOA 3PEIA 4JGKA 2FG1A 3EWPA 2XD7A 2AFCA 4D86A 2EWBA 3H8GA 3SIIA 3GQEA 2L8RA 1BPMA 3Q71A 3JRUA 5HOLA 4ETKA 5D8NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KSI A;  1BLL E;  4ESS A;  4R7M A;  5AIL A;  4ZY1 A;  5CB5 A;  4J4Z A;  1LAM A;  3KQX A;  3GQO A;  4ABL A;  1VHU A;  3EWQ A;  4J5Q A;  3SIJ A;  1YD9 A;  2EEE A;  4KYB A;  3ETI A;  4ZI6 A;  4K3N A;  3IJ3 A;  1TY8 A;  3SIG A;  4J5R A;  4K0C A;  3V2B A;  3VFQ A;  3EKE A;  4ETJ A;  3H8F A;  2X47 A;  3IID A;  4X2T A;  5DUS A;  5HIH A;  4JCA A;  3SIH A;  5E3B A;  1TXZ A;  4ZX8 A;  3EJF A;  4ZY2 A;  3IIF A;  4J5S A;  4ABK A;  4GVW A;  4JLL A;  4JVV A;  3EWR A;  1LAN A;  3KR5 A;  3T8W A;  5CB3 A;  2FAV A;  4ZY0 A;  5FSY A;  3V45 A;  1BPN A;  5CBM A;  1HJZ A;  4R76 A;  1ZR5 A;  3EW5 A;  3EJG A;  2FXK A;  3GPG A;  1LAP A;  1ZR3 A;  1NJR A;  2VRI A;  5FSV A;  4GVV A;  3KZW A;  4IQY A;  3GPQ A;  4GUA A;  4ZYQ A;  1SPV A;  2LGR A;  2J9A A;  2BFR A;  1GYT A;  4R6T A;  5CMS A;  2DX6 A;  1LCP A;  3KQZ A;  3Q6Z A;  3H8E A;  3JZT A;  4UML A;  5FSZ A;  4TU0 A;  2ACF A;  5FSU A;  3KR4 A;  5FSX A;  2BFQ A;  4ZX9 A;  3EWO A;  3GPO A;  3PEI A;  4JGK A;  2FG1 A;  3EWP A;  2XD7 A;  2AFC A;  4D86 A;  2EWB A;  3H8G A;  3SII A;  3GQE A;  2L8R A;  1BPM A;  3Q71 A;  3JRU A;  5HOL A;  4ETK A;  5D8N A; 
#chains in the Genus database with same CATH topology
 4KSI A;  2KQV A;  1BLL E;  4ESS A;  4R7M A;  5AIL A;  4ZY1 A;  5CB5 A;  2W2G A;  4J4Z A;  1LAM A;  3KQX A;  3GQO A;  4ABL A;  1VHU A;  3EWQ A;  4J5Q A;  3SIJ A;  1YD9 A;  2EEE A;  4KYB A;  3ETI A;  4ZI6 A;  4K3N A;  3IJ3 A;  1TY8 A;  3SIG A;  4J5R A;  4K0C A;  3V2B A;  3VFQ A;  3EKE A;  4ETJ A;  3H8F A;  2X47 A;  3IID A;  4X2T A;  5DUS A;  5HIH A;  4JCA A;  3SIH A;  5E3B A;  1TXZ A;  4ZX8 A;  3EJF A;  4ZY2 A;  3IIF A;  4J5S A;  4ABK A;  4GVW A;  2JZF A;  4JLL A;  4JVV A;  3EWR A;  1LAN A;  3KR5 A;  3T8W A;  5CB3 A;  2FAV A;  4ZY0 A;  5FSY A;  3V45 A;  1BPN A;  5CBM A;  1HJZ A;  4R76 A;  1ZR5 A;  3EW5 A;  3EJG A;  2FXK A;  3GPG A;  1LAP A;  2WCT A;  1ZR3 A;  2JZE A;  1NJR A;  2VRI A;  5FSV A;  4GVV A;  3KZW A;  4IQY A;  3GPQ A;  4GUA A;  4ZYQ A;  1SPV A;  2LGR A;  2J9A A;  2BFR A;  1GYT A;  4R6T A;  5CMS A;  2DX6 A;  1LCP A;  3KQZ A;  3Q6Z A;  3H8E A;  3JZT A;  4UML A;  5FSZ A;  4TU0 A;  2ACF A;  5FSU A;  3KR4 A;  5FSX A;  2BFQ A;  4ZX9 A;  3EWO A;  3GPO A;  3PEI A;  4JGK A;  2FG1 A;  3EWP A;  2XD7 A;  2JZD A;  2AFC A;  4D86 A;  2EWB A;  3H8G A;  3SII A;  3GQE A;  2L8R A;  1BPM A;  3Q71 A;  3JRU A;  5HOL A;  4ETK A;  2RNK A;  5D8N A; 
#chains in the Genus database with same CATH homology
 4KSI A;  1BLL E;  4ESS A;  4R7M A;  5AIL A;  4ZY1 A;  5CB5 A;  4J4Z A;  1LAM A;  3KQX A;  3GQO A;  4ABL A;  1VHU A;  3EWQ A;  4J5Q A;  3SIJ A;  1YD9 A;  2EEE A;  4KYB A;  3ETI A;  4ZI6 A;  4K3N A;  3IJ3 A;  1TY8 A;  3SIG A;  4J5R A;  4K0C A;  3V2B A;  3VFQ A;  3EKE A;  4ETJ A;  3H8F A;  2X47 A;  3IID A;  4X2T A;  5DUS A;  5HIH A;  4JCA A;  3SIH A;  5E3B A;  1TXZ A;  4ZX8 A;  3EJF A;  4ZY2 A;  3IIF A;  4J5S A;  4ABK A;  4GVW A;  4JLL A;  4JVV A;  3EWR A;  1LAN A;  3KR5 A;  3T8W A;  5CB3 A;  2FAV A;  4ZY0 A;  5FSY A;  3V45 A;  1BPN A;  5CBM A;  1HJZ A;  4R76 A;  1ZR5 A;  3EW5 A;  3EJG A;  2FXK A;  3GPG A;  1LAP A;  1ZR3 A;  1NJR A;  2VRI A;  5FSV A;  4GVV A;  3KZW A;  4IQY A;  3GPQ A;  4GUA A;  4ZYQ A;  1SPV A;  2LGR A;  2J9A A;  2BFR A;  1GYT A;  4R6T A;  5CMS A;  2DX6 A;  1LCP A;  3KQZ A;  3Q6Z A;  3H8E A;  3JZT A;  4UML A;  5FSZ A;  4TU0 A;  2ACF A;  5FSU A;  3KR4 A;  5FSX A;  2BFQ A;  4ZX9 A;  3EWO A;  3GPO A;  3PEI A;  4JGK A;  2FG1 A;  3EWP A;  2XD7 A;  2AFC A;  4D86 A;  2EWB A;  3H8G A;  3SII A;  3GQE A;  2L8R A;  1BPM A;  3Q71 A;  3JRU A;  5HOL A;  4ETK A;  5D8N A; 
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similar chains in the Genus database (?% sequence similarity)
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