3KAVA

Crystal structure of the mutant (l80m) pa2107 protein from pseudomonas aeruginosa, northeast structural genomics consortium target par198
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
102
structure length
102
Chain Sequence
AAQAPEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLMERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVEACRPLL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords uncharacterized protein PA2107
publication title Northeast Structural Genomics Consortium Target PaR198
rcsb
source organism Pseudomonas aeruginosa
total genus 43
structure length 102
sequence length 102
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2009-10-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03860 DUF326 Domain of Unknown Function (DUF326)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.360 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 3kavA00
3KAWA 3KAVA 5FIGA 3LMFA
chains in the Genus database with same CATH superfamily
2EX3B 4R5IA 4HY9A 2YIVX 3RPMA 4FZOA 2D4CA 4JWEA 4EZNA 2V0OA 5E84A 4EZWA 2F7OA 3VEBA 4D8JA 4WPCA 1TQWA 2ZXQA 4WPEA 5KBPA 1R34A 2X3VA 2Q13A 4IM0A 4NSWA 3BLBA 3RV0A 4FM3A 2YKTA 4R5LA 3DX2A 4FZSA 2OZNB 3D50A 3HAIA 4F01A 3T48A 2QKWA 3T47A 3LLLA 4E81A 2JNKA 3CVRA 4JWIA 1GNTA 1O7DB 2F1AA 3BUIA 3F7WA 1E9VA 1TQUA 4KIKB 3D4ZA 1OAOA 2FYVA 3T4AG 3BUDA 4IWQA 2EWFA 5C5BA 4AZCB 4JWCA 4HR1A 3C7NA 3Q84A 1X03A 1DKZA 2F7RA 1SU8A 1WDZA 1I4DA 1ZYLA 3LVTA 2X3WA 3ACOA 4ATMA 2LM0A 4DCNC 3DDGA 4DYLA 4H6IA 4B9QA 2D1LA 3CKDA 4EZPA 4R5KA 3BUQA 3QNIA 3VKHA 3O3NB 3QWEA 4JWDA 2MI7A 3CV5A 3EJSA 2Z0VA 2OW7A 3RV1A 5C5BB 1URUA 1MJGA 3CZNA 3QNJA 3LMFA 4JNFA 4JN4A 2RAIA 2YLAA 3M3WA 2C08A 4AZ5A 3SOGA 4EZXA 3O3MB 3OK8A 3I2WA 4AKVA 1I4TA 1SU6A 4I1QA 1PS3A 3KAVA 3SYVA 4H6HA 3KDRA 2PMRA 3CZSA 1E1DA 3DDFA 3D4YA 4EZOA 3KAWA 3ER9B 3VEAA 2ELBA 4EZQA 2OW6A 1QWNA 1ZWWA 1R5EA 1I4LA 3I39X 1HWWA 3GI7A 4AZHA 4IW0A 1LQ7A 1HTYA 3ERCC 1HXKA 1DKXA 2GF4A 5FLEX 2Z0NA 4R5GA 3BVWA 4IM3A 1O7DC 4JNEA 2ND1A 4AZ7A 2YLLA 2NCZA 3HAJA 4BNEA 3DX3A 2RAJA 1TQVA 3L3PA 2RAKA 3DX1A 1DKYA 2F7QA 3BVUA 3ABHA 4NPHA 4EZYA 2YL9A 3BUPA 3I04A 4M0MA 2YL8A 3BVTA 4EZUA 2LXYA 3BUBA 3B52X 1OA1A 3CAZA 3D2EA 3OHXM 1U00A 4AZGA 2GA9D 3EJPA 1W9MA 1YWMA 2GAFD 1JQKA 3DYTA 4HR1B 1UPXA 2YL6A 2OBLA 2F18A 2EFLA 3B51X 4EZVA 4PO2A 1GNLA 4IWPA 3T49A 4JLCA 2WINM 3BVVA 1Y2OA 2O0I1 4H8SA 3EJRA 1QX1A 4R5JA 5TKYA 3I01A 1E2UA 4KIKA 2YI9A 2FICA 3D2FA 2F1BA 4AZCA 1I49A 4EZSA 2F7PA 4NQIA 3QE6A 4EZTA 4AZIA 2QXLA 3DX0A 4IWOA 3EJUA 3FD9A 3EJTA 3DPQA 4AZBA 1GN9A 1TQTA 2EFKA 2KHOA 3DX4A 3EJQA 3HAHA 4EZRA 2JNSA 2Z0OA 2Z8YA 3A98A 1X04A 2YL5A 3G9GA 2N3KA 3OWGA 4IM2A 2WYHA 4JL9A 3B53X 1OA0A 4F00A 4UDYX 1R33A 2Q12A 2PY6A 2X3XA 2WYIA 2OBMA 3Q0KA 1TQSA 2OO2A 4AVMA 4EZZA 2YIAA 3QA8A 1SU7A 4E3CA 4FZPA 1SUFA 4HYBA 4AZ6A 3L3OM 3UITA 4UDXX 2RT6A 3ER8C 2YIBA 5FIGA 2X5CA 3PLTA 3D51A 3BVXA 3DPOA 3T46A 3D52A 2ALWA 3ZEDA 2QFFA 2YI8A 4G6QA 2ND0A 1QWUA 3DPPA 3O3OB
chains in the Genus database with same CATH topology
5FLEX 3D2FA 2EX3B 2LM0A 4R5IA 4R5GA 4HY9A 2YIVX 4IM3A 4H6IA 4EZSA 4JNEA 4B9QA 2ND1A 4EZTA 2QXLA 4IWOA 4EZPA 4R5KA 2NCZA 3FD9A 3DPQA 3VKHA 3O3NB 1GN9A 2KHOA 4JWDA 4JWEA 4EZNA 5E84A 4EZRA 2JNSA 2Z8YA 4EZWA 3RV1A 3A98A 1DKYA 3VEBA 4D8JA 2N3KA 3OWGA 1MJGA 4IM2A 4NPHA 3QNJA 3LMFA 4JNFA 4JN4A 4JL9A 4IM0A 3B53X 4EZYA 3I04A 4M0MA 1OA0A 3RV0A 4FM3A 4R5LA 4F00A 4UDYX 4EZUA 4EZXA 3O3MB 3B52X 2PY6A 1OA1A 2OBMA 3D2EA 3OHXM 1U00A 1SU6A 4F01A 2GA9D 3KAVA 4EZZA 1W9MA 4H6HA 2YIAA 3T48A 3QA8A 3KDRA 3T47A 4E81A 1SU7A 1E1DA 2GAFD 1JQKA 4HR1B 4JWIA 4E3CA 1UPXA 1GNTA 1SUFA 2OBLA 4EZOA 3F7WA 3B51X 1E9VA 3KAWA 4HYBA 4EZVA 3ER9B 4PO2A 3VEAA 4KIKB 4EZQA 1GNLA 1OAOA 3L3OM 3UITA 3T4AG 4UDXX 2RT6A 4IWPA 3ER8C 4IWQA 3T49A 4JLCA 2WINM 2YIBA 5FIGA 2X5CA 2EWFA 3DPOA 3I39X 3T46A 4JWCA 3GI7A 4IW0A 4HR1A 3ZEDA 2QFFA 2YI8A 3C7NA 4R5JA 4G6QA 5TKYA 1DKZA 1SU8A 3I01A 2ND0A 1E2UA 3DPPA 4KIKA 1ZYLA 3O3OB 3ERCC 2YI9A 1DKXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KAW A;  3KAV A;  5FIG A;  3LMF A; 
#chains in the Genus database with same CATH topology
 2EX3 B;  4R5I A;  4HY9 A;  2YIV X;  3RPM A;  4FZO A;  2D4C A;  4JWE A;  4EZN A;  2V0O A;  5E84 A;  4EZW A;  2F7O A;  3VEB A;  4D8J A;  4WPC A;  1TQW A;  2ZXQ A;  4WPE A;  5KBP A;  1R34 A;  2X3V A;  2Q13 A;  4IM0 A;  4NSW A;  3BLB A;  3RV0 A;  4FM3 A;  2YKT A;  4R5L A;  3DX2 A;  4FZS A;  2OZN B;  3D50 A;  3HAI A;  4F01 A;  3T48 A;  2QKW A;  3T47 A;  3LLL A;  4E81 A;  2JNK A;  3CVR A;  4JWI A;  1GNT A;  1O7D B;  2F1A A;  3BUI A;  3F7W A;  1E9V A;  1TQU A;  4KIK B;  3D4Z A;  1OAO A;  2FYV A;  3T4A G;  3BUD A;  4IWQ A;  2EWF A;  5C5B A;  4AZC B;  4JWC A;  4HR1 A;  3C7N A;  3Q84 A;  1X03 A;  1DKZ A;  2F7R A;  1SU8 A;  1WDZ A;  1I4D A;  1ZYL A;  3LVT A;  2X3W A;  3ACO A;  4ATM A;  2LM0 A;  4DCN C;  3DDG A;  4DYL A;  4H6I A;  4B9Q A;  2D1L A;  3CKD A;  4EZP A;  4R5K A;  3BUQ A;  3QNI A;  3VKH A;  3O3N B;  3QWE A;  4JWD A;  2MI7 A;  3CV5 A;  3EJS A;  2Z0V A;  2OW7 A;  3RV1 A;  5C5B B;  1URU A;  1MJG A;  3CZN A;  3QNJ A;  3LMF A;  4JNF A;  4JN4 A;  2RAI A;  2YLA A;  3M3W A;  2C08 A;  4AZ5 A;  3SOG A;  4EZX A;  3O3M B;  3OK8 A;  3I2W A;  4AKV A;  1I4T A;  1SU6 A;  4I1Q A;  1PS3 A;  3KAV A;  3SYV A;  4H6H A;  3KDR A;  2PMR A;  3CZS A;  1E1D A;  3DDF A;  3D4Y A;  4EZO A;  3KAW A;  3ER9 B;  3VEA A;  2ELB A;  4EZQ A;  2OW6 A;  1QWN A;  1ZWW A;  1R5E A;  1I4L A;  3I39 X;  1HWW A;  3GI7 A;  4AZH A;  4IW0 A;  1LQ7 A;  1HTY A;  3ERC C;  1HXK A;  1DKX A;  2GF4 A;  5FLE X;  2Z0N A;  4R5G A;  3BVW A;  4IM3 A;  1O7D C;  4JNE A;  2ND1 A;  4AZ7 A;  2YLL A;  2NCZ A;  3HAJ A;  4BNE A;  3DX3 A;  2RAJ A;  1TQV A;  3L3P A;  2RAK A;  3DX1 A;  1DKY A;  2F7Q A;  3BVU A;  3ABH A;  4NPH A;  4EZY A;  2YL9 A;  3BUP A;  3I04 A;  4M0M A;  2YL8 A;  3BVT A;  4EZU A;  2LXY A;  3BUB A;  3B52 X;  1OA1 A;  3CAZ A;  3D2E A;  3OHX M;  1U00 A;  4AZG A;  2GA9 D;  3EJP A;  1W9M A;  1YWM A;  2GAF D;  1JQK A;  3DYT A;  4HR1 B;  1UPX A;  2YL6 A;  2OBL A;  2F18 A;  2EFL A;  3B51 X;  4EZV A;  4PO2 A;  1GNL A;  4IWP A;  3T49 A;  4JLC A;  2WIN M;  3BVV A;  1Y2O A;  2O0I 1;  4H8S A;  3EJR A;  1QX1 A;  4R5J A;  5TKY A;  3I01 A;  1E2U A;  4KIK A;  2YI9 A;  2FIC A;  3D2F A;  2F1B A;  4AZC A;  1I49 A;  4EZS A;  2F7P A;  4NQI A;  3QE6 A;  4EZT A;  4AZI A;  2QXL A;  3DX0 A;  4IWO A;  3EJU A;  3FD9 A;  3EJT A;  3DPQ A;  4AZB A;  1GN9 A;  1TQT A;  2EFK A;  2KHO A;  3DX4 A;  3EJQ A;  3HAH A;  4EZR A;  2JNS A;  2Z0O A;  2Z8Y A;  3A98 A;  1X04 A;  2YL5 A;  3G9G A;  2N3K A;  3OWG A;  4IM2 A;  2WYH A;  4JL9 A;  3B53 X;  1OA0 A;  4F00 A;  4UDY X;  1R33 A;  2Q12 A;  2PY6 A;  2X3X A;  2WYI A;  2OBM A;  3Q0K A;  1TQS A;  2OO2 A;  4AVM A;  4EZZ A;  2YIA A;  3QA8 A;  1SU7 A;  4E3C A;  4FZP A;  1SUF A;  4HYB A;  4AZ6 A;  3L3O M;  3UIT A;  4UDX X;  2RT6 A;  3ER8 C;  2YIB A;  5FIG A;  2X5C A;  3PLT A;  3D51 A;  3BVX A;  3DPO A;  3T46 A;  3D52 A;  2ALW A;  3ZED A;  2QFF A;  2YI8 A;  4G6Q A;  2ND0 A;  1QWU A;  3DPP A;  3O3O B; 
#chains in the Genus database with same CATH homology
 5FLE X;  3D2F A;  2EX3 B;  2LM0 A;  4R5I A;  4R5G A;  4HY9 A;  2YIV X;  4IM3 A;  4H6I A;  4EZS A;  4JNE A;  4B9Q A;  2ND1 A;  4EZT A;  2QXL A;  4IWO A;  4EZP A;  4R5K A;  2NCZ A;  3FD9 A;  3DPQ A;  3VKH A;  3O3N B;  1GN9 A;  2KHO A;  4JWD A;  4JWE A;  4EZN A;  5E84 A;  4EZR A;  2JNS A;  2Z8Y A;  4EZW A;  3RV1 A;  3A98 A;  1DKY A;  3VEB A;  4D8J A;  2N3K A;  3OWG A;  1MJG A;  4IM2 A;  4NPH A;  3QNJ A;  3LMF A;  4JNF A;  4JN4 A;  4JL9 A;  4IM0 A;  3B53 X;  4EZY A;  3I04 A;  4M0M A;  1OA0 A;  3RV0 A;  4FM3 A;  4R5L A;  4F00 A;  4UDY X;  4EZU A;  4EZX A;  3O3M B;  3B52 X;  2PY6 A;  1OA1 A;  2OBM A;  3D2E A;  3OHX M;  1U00 A;  1SU6 A;  4F01 A;  2GA9 D;  3KAV A;  4EZZ A;  1W9M A;  4H6H A;  2YIA A;  3T48 A;  3QA8 A;  3KDR A;  3T47 A;  4E81 A;  1SU7 A;  1E1D A;  2GAF D;  1JQK A;  4HR1 B;  4JWI A;  4E3C A;  1UPX A;  1GNT A;  1SUF A;  2OBL A;  4EZO A;  3F7W A;  3B51 X;  1E9V A;  3KAW A;  4HYB A;  4EZV A;  3ER9 B;  4PO2 A;  3VEA A;  4KIK B;  4EZQ A;  1GNL A;  1OAO A;  3L3O M;  3UIT A;  3T4A G;  4UDX X;  2RT6 A;  4IWP A;  3ER8 C;  4IWQ A;  3T49 A;  4JLC A;  2WIN M;  2YIB A;  5FIG A;  2X5C A;  2EWF A;  3DPO A;  3I39 X;  3T46 A;  4JWC A;  3GI7 A;  4IW0 A;  4HR1 A;  3ZED A;  2QFF A;  2YI8 A;  3C7N A;  4R5J A;  4G6Q A;  5TKY A;  1DKZ A;  1SU8 A;  3I01 A;  2ND0 A;  1E2U A;  3DPP A;  4KIK A;  1ZYL A;  3O3O B;  3ERC C;  2YI9 A;  1DKX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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