3LOGA

Crystal structure of mbti from mycobacterium tuberculosis
Total Genus 151
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
151
sequence length
435
structure length
435
Chain Sequence
SSSIPMPAGVNPADLAAELAAVVTESVDEDYLLYECDGQWVLAAGVQAMVELDSDELRVIRDGVTRRQQWSGRPGAALGEAVDRLLLETDQAFGWVAFEFGVHRYGLQQRLAPHTPLARVFSPRTRIMVSEKEIRLFDAGIRHREAIDRLLATGVREVPQSRSVDVSDDPSGFRRRVAVAVDEIAAGRYHKVILSRCVEVPFAIDFPLTYRLGRRHNTPVRSFLLQLGGIRALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRAAYQVGGRTWLRAGAGIIEESEPEREFEETCEKLSTLTPYLVAR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
molecule keywords Isochorismate synthase/isochorismate-pyruvate lyase mbtI
publication title Inhibition studies of Mycobacterium tuberculosis salicylate synthase (MbtI).
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 151
structure length 435
sequence length 435
chains with identical sequence B, C, D
ec nomenclature ec 4.2.99.21: Isochorismate lyase.
pdb deposition date 2010-02-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00425 Chorismate_bind chorismate binding enzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.120.10 Alpha Beta 4-Layer Sandwich Anthranilate synthase Anthranilate synthase 3logA00
5JY4A 3OS6A 1QDLA 3GSEA 3H9MA 3BZMA 5KCKA 3R74A 2FN1A 3HWOA 2I6YA 5JZDA 5JY4B 1K0EA 1I1QA 1I7QA 1K0GA 2EUAA 3ST6A 4GRHA 3RV6A 2G5FA 5CWAA 1I7SA 3RV7A 3RV8A 5JY9A 3BZNA 2FN0A 3LOGA 5JXZA 3R76A 3RV9A 3VEHA 5JY8A 3R75A
chains in the Genus database with same CATH superfamily
5JY4A 3OS6A 1QDLA 3GSEA 3H9MA 3BZMA 5KCKA 3R74A 2FN1A 3HWOA 2I6YA 5JZDA 5JY4B 1K0EA 1I1QA 1I7QA 1K0GA 2EUAA 3ST6A 4GRHA 3RV6A 2G5FA 5CWAA 1I7SA 3RV7A 3RV8A 5JY9A 3BZNA 2FN0A 3LOGA 5JXZA 3R76A 3RV9A 3VEHA 5JY8A 3R75A
chains in the Genus database with same CATH topology
5JY4A 3OS6A 1QDLA 3GSEA 3H9MA 3BZMA 5KCKA 3R74A 2FN1A 3HWOA 2I6YA 5JZDA 5JY4B 1K0EA 1I1QA 1I7QA 1K0GA 2EUAA 3ST6A 4GRHA 3RV6A 2G5FA 5CWAA 1I7SA 3RV7A 3RV8A 5JY9A 3BZNA 2FN0A 3LOGA 5JXZA 3R76A 3RV9A 3VEHA 5JY8A 3R75A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5JY4 A;  3OS6 A;  1QDL A;  3GSE A;  3H9M A;  3BZM A;  5KCK A;  3R74 A;  2FN1 A;  3HWO A;  2I6Y A;  5JZD A;  5JY4 B;  1K0E A;  1I1Q A;  1I7Q A;  1K0G A;  2EUA A;  3ST6 A;  4GRH A;  3RV6 A;  2G5F A;  5CWA A;  1I7S A;  3RV7 A;  3RV8 A;  5JY9 A;  3BZN A;  2FN0 A;  3LOG A;  5JXZ A;  3R76 A;  3RV9 A;  3VEH A;  5JY8 A;  3R75 A; 
#chains in the Genus database with same CATH topology
 5JY4 A;  3OS6 A;  1QDL A;  3GSE A;  3H9M A;  3BZM A;  5KCK A;  3R74 A;  2FN1 A;  3HWO A;  2I6Y A;  5JZD A;  5JY4 B;  1K0E A;  1I1Q A;  1I7Q A;  1K0G A;  2EUA A;  3ST6 A;  4GRH A;  3RV6 A;  2G5F A;  5CWA A;  1I7S A;  3RV7 A;  3RV8 A;  5JY9 A;  3BZN A;  2FN0 A;  3LOG A;  5JXZ A;  3R76 A;  3RV9 A;  3VEH A;  5JY8 A;  3R75 A; 
#chains in the Genus database with same CATH homology
 5JY4 A;  3OS6 A;  1QDL A;  3GSE A;  3H9M A;  3BZM A;  5KCK A;  3R74 A;  2FN1 A;  3HWO A;  2I6Y A;  5JZD A;  5JY4 B;  1K0E A;  1I1Q A;  1I7Q A;  1K0G A;  2EUA A;  3ST6 A;  4GRH A;  3RV6 A;  2G5F A;  5CWA A;  1I7S A;  3RV7 A;  3RV8 A;  5JY9 A;  3BZN A;  2FN0 A;  3LOG A;  5JXZ A;  3R76 A;  3RV9 A;  3VEH A;  5JY8 A;  3R75 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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