3NY7B

Stas domain of ychm bound to acp
Total Genus 25
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
77
structure length
77
Chain Sequence
STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords Sulfate transporter
publication title Structure of a SLC26 Anion Transporter STAS Domain in Complex with Acyl Carrier Protein: Implications for E. coli YchM in Fatty Acid Metabolism.
pubmed doi rcsb
source organism Escherichia coli
total genus 25
structure length 77
sequence length 77
ec nomenclature
pdb deposition date 2010-07-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 3ny7B00
2N98A 5KP6B 2FQ2A 2N5HA 1T8KA 2KOOA 2MVVA 2FACA 2KGAA 4MRTC 2PNGA 2L9FA 1L0IA 5CZDB 2FAEA 2K94A 3GZLA 2VSQA 2K2QA 2K93A 2ROQA 2LIWA 4PXHB 2KOSA 2M5RA 2FVFA 2JU1A 1L0HA 2LKIA 2L4BA 1OR5A 2CNRA 4PWVB 1KLPA 2AFDA 2KGDA 5KP7B 2KORA 3CE7A 1HQBA 2FHSC 3EJBA 2EHTA 4NEOA 2FQ0A 2K0YA 1AF8A 2XZ1C 2KG6A 2L22A 4BPHA 2N5IA 2MD9A 3GZMA 2KGCA 2XZ0D 2MF4A 4HKGA 5HV8A 1NQ4A 4IZ6A 1HY8A 4H2WC 2N6ZA 3RG2A 2LTEA 2CGQA 2KG8A 4H2YC 2KOPA 2GDXA 2LL8A 2CQ8A 2X2BA 5KP8B 5EJDA 2KWLA 5HVCA 4CA3A 1X3OA 1ACPA 3EJDA 2AFEA 2CG5B 2LMLA 2FADA 2LIUA 1DNYA 2KG9A 1DV5A 1VKUA 4BPFA 2LOLA 2MY5A 4DG9A 2JQ4A 3NY7B 4R0MA 2KGEA 2KR5A 2N6YA 2FQ1A 2AF8A 2FVEA 3LMOA 2DNWA 2MR8A 2K92A 2K0XA 2AVAA 1F80D 4BPGA 2KOQA 2MVUA 2KW2A 2GDYA 2EHSA 2QNWA 2FVAA 2JGPA 2LPKA 2MR7A 2GDWA 4H2XC 3EJEA 2L0QA 2N50A 2JU2A
chains in the Genus database with same CATH superfamily
5KP6B 1GPJA 2CWOA 3WBHA 2E1MA 2KGAA 2OARA 4XFXA 2FAEA 1N8RQ 3DS0A 2LIWA 2PEOA 3CC7P 1L0HA 2L4BA 2CNRA 2PEKA 2AFDA 2GYKA 3CE7A 3CMAP 2EHTA 3I56P 3H0DA 4F37A 2Z46A 1K8AQ 1KD1Q 2PEMA 4U0CA 4GR6A 2XV6A 3RG6C 2EG5A 2N5IA 2MD9A 2MF4A 4IZ6A 3HYBA 1HY8A 1BXIA 5F2KA 3CCLP 3CCJP 4H2YC 2GDXA 2LL8A 1Q86Q 1A43A 5BS2A 3P05A 2ONTA 4COPA 2LIUA 3CCEP 1K73Q 3G4SP 3OW2O 4R0MA 2KGEA 3G1IA 1RO0A 4PH1A 3G71P 3CCRP 2FVEA 2WPTA 4U0BA 2DNWA 2MR8A 3CCUP 2AVAA 3CC2P 2KW2A 1EMVA 3VRLC 3LRYA 2LPKA 2JO0A 5BS1A 1VQ5P 3EJEA 1K9MQ 1ZNVA 2L0QA 2L6EA 2JU2A 2N98A 4QNBA 1IMQA 2N5HA 1T8KA 1YITP 2VLNA 2FACA 1L0IA 5F2OA 2K94A 2XT1A 2K2QA 1Q81Q 4PXHB 3CCVP 3MGEA 2LKIA 2M8PA 1VQNP 4PWVB 2EIAA 5KP7B 4XRQA 4GR2A 1HQBA 3CCMP 1VQKP 2FHSC 3G26A 2JB0A 3CCSP 1Z6MA 1M90Q 1GXHA 3DS1A 4BPHA 2GZIA 2XZ0D 1NQ4A 2KODA 2JYGA 2CGQA 2KG8A 1BAJA 1VQ7P 1EIAA 5KP8B 1VQMP 1M6EX 2VLOA 1D1DA 3DS4A 3Q20A 2PEIA 1YJWP 2CG5B 1QVGO 2FADA 1RO2A 2KG9A 1KQSO 3E2DA 2BUOA 3NY7B 3DS3A 2N6YA 2FQ1A 2AF8A 3LMOA 1A8OA 1VQLP 4U0AA 4PH0A 5JPAA 1F80D 2KOQA 2MVUA 4U0FA 3G1GA 2EHSA 1JJ2O 1Q7YQ 2FVAA 2JGPA 1ZMBA 2MR7A 1IMPA 1M74A 2BHVA 1QVFO 4IPYA 4UHPB 2N50A 3B4QA 2FQ2A 3G6EP 3CD6P 2KOOA 3CXCO 1Q82Q 2L9FA 3G21A 1KC8Q 2VLQA 1E6JP 2ROQA 2K93A 2ERHA 2KOSA 2FVFA 2QA4P 1KLPA 2KGDA 3H4EA 2VLPA 4NEOA 2PEJA 2K0YA 1AF8A 7CEIA 1E0HA 3U43A 2OTJP 2L22A 2EFJA 3DS2A 3GZMA 4HKGA 3HZQA 1VQPP 5EW5E 3GJNA 2JBGA 2N6ZA 3RG2A 2KOPA 5HGOA 5I4TG 2CQ8A 2X2BA 5EJDA 1FR2A 1RNIA 1VQOP 1VQ4P 1M6NA 4COCA 1DNYA 1AUMA 1YIJP 2LF4A 4XROA 1VKUA 5HGMA 4BPFA 2LOLA 2M8NA 2JYLA 3DTJA 2GZGA 5F2NA 1YJNP 4BPGA 3CMEP 2GZJA 1W2BO 2K0DX 1VQ8P 1VHNA 2GDYA 2GDWA 2Z45A 3I55P 2XXMA 1VQ9P 2DGYA 1UJZA 2MVVA 1MZ8A 1YHQP 4MRTC 3CPWO 2PNGA 1VQ6P 3H47A 1IUQA 1UNKA 5CZDB 3GZLA 2VSQA 1YI2P 2M5RA 2JU1A 1S72P 4WYMA 1NJIQ 1OR5A 2P9XA 2KORA 3G29A 1EOQA 3EJBA 2JAZA 2GZEA 1GXGA 2OTLP 2FQ0A 3G28A 2PY8A 3NTEA 2XZ1C 2KG6A 2KGCA 5HV8A 2M8LA 4H2WC 2LTEA 2K5XA 5HGNA 1QRJA 3M1MA 2NO8A 3G0VA 4M0IA 2KWLA 5HVCA 4CA3A 1X3OA 1ACPA 3EJDA 2AFEA 4U0EA 2LMLA 4XFZA 1DV5A 3CCQP 1M1KQ 3CC4P 2PENA 2MY5A 4DG9A 2JQ4A 1YJ9P 2PEQA 4U0DA 2QEXP 2Z44A 2KR5A 1K30A 4XFYA 2GZFA 3DPHA 2K92A 2K0XA 3GKLC 3DS5A 4QKOA 5DCKA 1AYIA 2QNWA 3B5IA 4H2XC 1CEIA 5HGLA
chains in the Genus database with same CATH topology
2N98A 5KP6B 2FQ2A 2N5HA 1T8KA 2KOOA 2MVVA 2FACA 2KGAA 4MRTC 2PNGA 2L9FA 1L0IA 5CZDB 2FAEA 2K94A 3GZLA 2VSQA 2K2QA 2K93A 2ROQA 2LIWA 4PXHB 2KOSA 2M5RA 2FVFA 2JU1A 1L0HA 2LKIA 2L4BA 1OR5A 2CNRA 4PWVB 1KLPA 2AFDA 2KGDA 5KP7B 2KORA 3CE7A 1HQBA 2FHSC 3EJBA 2EHTA 4NEOA 2FQ0A 2K0YA 1AF8A 2XZ1C 2KG6A 2L22A 4BPHA 2N5IA 2MD9A 3GZMA 2KGCA 2XZ0D 2MF4A 4HKGA 5HV8A 1NQ4A 4IZ6A 1HY8A 4H2WC 2N6ZA 3RG2A 2LTEA 2CGQA 2KG8A 4H2YC 2KOPA 2GDXA 2LL8A 2CQ8A 2X2BA 5KP8B 5EJDA 2KWLA 5HVCA 4CA3A 1X3OA 1ACPA 3EJDA 2AFEA 2CG5B 2LMLA 2FADA 2LIUA 1DNYA 2KG9A 1DV5A 1VKUA 4BPFA 2LOLA 2MY5A 4DG9A 2JQ4A 3NY7B 4R0MA 2KGEA 2KR5A 2N6YA 2FQ1A 2AF8A 2FVEA 3LMOA 2DNWA 2MR8A 2K92A 2K0XA 2AVAA 1F80D 4BPGA 2KOQA 2MVUA 2KW2A 2GDYA 2EHSA 2QNWA 2FVAA 2JGPA 2LPKA 2MR7A 2GDWA 4H2XC 3EJEA 2L0QA 2N50A 2JU2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2N98 A;  5KP6 B;  2FQ2 A;  2N5H A;  1T8K A;  2KOO A;  2MVV A;  2FAC A;  2KGA A;  4MRT C;  2PNG A;  2L9F A;  1L0I A;  5CZD B;  2FAE A;  2K94 A;  3GZL A;  2VSQ A;  2K2Q A;  2K93 A;  2ROQ A;  2LIW A;  4PXH B;  2KOS A;  2M5R A;  2FVF A;  2JU1 A;  1L0H A;  2LKI A;  2L4B A;  1OR5 A;  2CNR A;  4PWV B;  1KLP A;  2AFD A;  2KGD A;  5KP7 B;  2KOR A;  3CE7 A;  1HQB A;  2FHS C;  3EJB A;  2EHT A;  4NEO A;  2FQ0 A;  2K0Y A;  1AF8 A;  2XZ1 C;  2KG6 A;  2L22 A;  4BPH A;  2N5I A;  2MD9 A;  3GZM A;  2KGC A;  2XZ0 D;  2MF4 A;  4HKG A;  5HV8 A;  1NQ4 A;  4IZ6 A;  1HY8 A;  4H2W C;  2N6Z A;  3RG2 A;  2LTE A;  2CGQ A;  2KG8 A;  4H2Y C;  2KOP A;  2GDX A;  2LL8 A;  2CQ8 A;  2X2B A;  5KP8 B;  5EJD A;  2KWL A;  5HVC A;  4CA3 A;  1X3O A;  1ACP A;  3EJD A;  2AFE A;  2CG5 B;  2LML A;  2FAD A;  2LIU A;  1DNY A;  2KG9 A;  1DV5 A;  1VKU A;  4BPF A;  2LOL A;  2MY5 A;  4DG9 A;  2JQ4 A;  3NY7 B;  4R0M A;  2KGE A;  2KR5 A;  2N6Y A;  2FQ1 A;  2AF8 A;  2FVE A;  3LMO A;  2DNW A;  2MR8 A;  2K92 A;  2K0X A;  2AVA A;  1F80 D;  4BPG A;  2KOQ A;  2MVU A;  2KW2 A;  2GDY A;  2EHS A;  2QNW A;  2FVA A;  2JGP A;  2LPK A;  2MR7 A;  2GDW A;  4H2X C;  3EJE A;  2L0Q A;  2N50 A;  2JU2 A; 
#chains in the Genus database with same CATH topology
 5KP6 B;  1GPJ A;  2CWO A;  3WBH A;  2E1M A;  2KGA A;  2OAR A;  4XFX A;  2FAE A;  1N8R Q;  3DS0 A;  2LIW A;  2PEO A;  3CC7 P;  1L0H A;  2L4B A;  2CNR A;  2PEK A;  2AFD A;  2GYK A;  3CE7 A;  3CMA P;  2EHT A;  3I56 P;  3H0D A;  4F37 A;  2Z46 A;  1K8A Q;  1KD1 Q;  2PEM A;  4U0C A;  4GR6 A;  2XV6 A;  3RG6 C;  2EG5 A;  2N5I A;  2MD9 A;  2MF4 A;  4IZ6 A;  3HYB A;  1HY8 A;  1BXI A;  5F2K A;  3CCL P;  3CCJ P;  4H2Y C;  2GDX A;  2LL8 A;  1Q86 Q;  1A43 A;  5BS2 A;  3P05 A;  2ONT A;  4COP A;  2LIU A;  3CCE P;  1K73 Q;  3G4S P;  3OW2 O;  4R0M A;  2KGE A;  3G1I A;  1RO0 A;  4PH1 A;  3G71 P;  3CCR P;  2FVE A;  2WPT A;  4U0B A;  2DNW A;  2MR8 A;  3CCU P;  2AVA A;  3CC2 P;  2KW2 A;  1EMV A;  3VRL C;  3LRY A;  2LPK A;  2JO0 A;  5BS1 A;  1VQ5 P;  3EJE A;  1K9M Q;  1ZNV A;  2L0Q A;  2L6E A;  2JU2 A;  2N98 A;  4QNB A;  1IMQ A;  2N5H A;  1T8K A;  1YIT P;  2VLN A;  2FAC A;  1L0I A;  5F2O A;  2K94 A;  2XT1 A;  2K2Q A;  1Q81 Q;  4PXH B;  3CCV P;  3MGE A;  2LKI A;  2M8P A;  1VQN P;  4PWV B;  2EIA A;  5KP7 B;  4XRQ A;  4GR2 A;  1HQB A;  3CCM P;  1VQK P;  2FHS C;  3G26 A;  2JB0 A;  3CCS P;  1Z6M A;  1M90 Q;  1GXH A;  3DS1 A;  4BPH A;  2GZI A;  2XZ0 D;  1NQ4 A;  2KOD A;  2JYG A;  2CGQ A;  2KG8 A;  1BAJ A;  1VQ7 P;  1EIA A;  5KP8 B;  1VQM P;  1M6E X;  2VLO A;  1D1D A;  3DS4 A;  3Q20 A;  2PEI A;  1YJW P;  2CG5 B;  1QVG O;  2FAD A;  1RO2 A;  2KG9 A;  1KQS O;  3E2D A;  2BUO A;  3NY7 B;  3DS3 A;  2N6Y A;  2FQ1 A;  2AF8 A;  3LMO A;  1A8O A;  1VQL P;  4U0A A;  4PH0 A;  5JPA A;  1F80 D;  2KOQ A;  2MVU A;  4U0F A;  3G1G A;  2EHS A;  1JJ2 O;  1Q7Y Q;  2FVA A;  2JGP A;  1ZMB A;  2MR7 A;  1IMP A;  1M74 A;  2BHV A;  1QVF O;  4IPY A;  4UHP B;  2N50 A;  3B4Q A;  2FQ2 A;  3G6E P;  3CD6 P;  2KOO A;  3CXC O;  1Q82 Q;  2L9F A;  3G21 A;  1KC8 Q;  2VLQ A;  1E6J P;  2ROQ A;  2K93 A;  2ERH A;  2KOS A;  2FVF A;  2QA4 P;  1KLP A;  2KGD A;  3H4E A;  2VLP A;  4NEO A;  2PEJ A;  2K0Y A;  1AF8 A;  7CEI A;  1E0H A;  3U43 A;  2OTJ P;  2L22 A;  2EFJ A;  3DS2 A;  3GZM A;  4HKG A;  3HZQ A;  1VQP P;  5EW5 E;  3GJN A;  2JBG A;  2N6Z A;  3RG2 A;  2KOP A;  5HGO A;  5I4T G;  2CQ8 A;  2X2B A;  5EJD A;  1FR2 A;  1RNI A;  1VQO P;  1VQ4 P;  1M6N A;  4COC A;  1DNY A;  1AUM A;  1YIJ P;  2LF4 A;  4XRO A;  1VKU A;  5HGM A;  4BPF A;  2LOL A;  2M8N A;  2JYL A;  3DTJ A;  2GZG A;  5F2N A;  1YJN P;  4BPG A;  3CME P;  2GZJ A;  1W2B O;  2K0D X;  1VQ8 P;  1VHN A;  2GDY A;  2GDW A;  2Z45 A;  3I55 P;  2XXM A;  1VQ9 P;  2DGY A;  1UJZ A;  2MVV A;  1MZ8 A;  1YHQ P;  4MRT C;  3CPW O;  2PNG A;  1VQ6 P;  3H47 A;  1IUQ A;  1UNK A;  5CZD B;  3GZL A;  2VSQ A;  1YI2 P;  2M5R A;  2JU1 A;  1S72 P;  4WYM A;  1NJI Q;  1OR5 A;  2P9X A;  2KOR A;  3G29 A;  1EOQ A;  3EJB A;  2JAZ A;  2GZE A;  1GXG A;  2OTL P;  2FQ0 A;  3G28 A;  2PY8 A;  3NTE A;  2XZ1 C;  2KG6 A;  2KGC A;  5HV8 A;  2M8L A;  4H2W C;  2LTE A;  2K5X A;  5HGN A;  1QRJ A;  3M1M A;  2NO8 A;  3G0V A;  4M0I A;  2KWL A;  5HVC A;  4CA3 A;  1X3O A;  1ACP A;  3EJD A;  2AFE A;  4U0E A;  2LML A;  4XFZ A;  1DV5 A;  3CCQ P;  1M1K Q;  3CC4 P;  2PEN A;  2MY5 A;  4DG9 A;  2JQ4 A;  1YJ9 P;  2PEQ A;  4U0D A;  2QEX P;  2Z44 A;  2KR5 A;  1K30 A;  4XFY A;  2GZF A;  3DPH A;  2K92 A;  2K0X A;  3GKL C;  3DS5 A;  4QKO A;  5DCK A;  1AYI A;  2QNW A;  3B5I A;  4H2X C;  1CEI A;  5HGL A; 
#chains in the Genus database with same CATH homology
 2N98 A;  5KP6 B;  2FQ2 A;  2N5H A;  1T8K A;  2KOO A;  2MVV A;  2FAC A;  2KGA A;  4MRT C;  2PNG A;  2L9F A;  1L0I A;  5CZD B;  2FAE A;  2K94 A;  3GZL A;  2VSQ A;  2K2Q A;  2K93 A;  2ROQ A;  2LIW A;  4PXH B;  2KOS A;  2M5R A;  2FVF A;  2JU1 A;  1L0H A;  2LKI A;  2L4B A;  1OR5 A;  2CNR A;  4PWV B;  1KLP A;  2AFD A;  2KGD A;  5KP7 B;  2KOR A;  3CE7 A;  1HQB A;  2FHS C;  3EJB A;  2EHT A;  4NEO A;  2FQ0 A;  2K0Y A;  1AF8 A;  2XZ1 C;  2KG6 A;  2L22 A;  4BPH A;  2N5I A;  2MD9 A;  3GZM A;  2KGC A;  2XZ0 D;  2MF4 A;  4HKG A;  5HV8 A;  1NQ4 A;  4IZ6 A;  1HY8 A;  4H2W C;  2N6Z A;  3RG2 A;  2LTE A;  2CGQ A;  2KG8 A;  4H2Y C;  2KOP A;  2GDX A;  2LL8 A;  2CQ8 A;  2X2B A;  5KP8 B;  5EJD A;  2KWL A;  5HVC A;  4CA3 A;  1X3O A;  1ACP A;  3EJD A;  2AFE A;  2CG5 B;  2LML A;  2FAD A;  2LIU A;  1DNY A;  2KG9 A;  1DV5 A;  1VKU A;  4BPF A;  2LOL A;  2MY5 A;  4DG9 A;  2JQ4 A;  3NY7 B;  4R0M A;  2KGE A;  2KR5 A;  2N6Y A;  2FQ1 A;  2AF8 A;  2FVE A;  3LMO A;  2DNW A;  2MR8 A;  2K92 A;  2K0X A;  2AVA A;  1F80 D;  4BPG A;  2KOQ A;  2MVU A;  2KW2 A;  2GDY A;  2EHS A;  2QNW A;  2FVA A;  2JGP A;  2LPK A;  2MR7 A;  2GDW A;  4H2X C;  3EJE A;  2L0Q A;  2N50 A;  2JU2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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