3ORVC

Crystal structure of the y294h-maug/pre-methylamine dehydrogenase complex
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
124
structure length
123
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/electron transport
molecule keywords Methylamine utilization protein mauG
publication title Functional Importance of Tyrosine 294 and the Catalytic Selectivity for the Bis-Fe(IV) State of MauG Revealed by Replacement of This Axial Heme Ligand with Histidine .
pubmed doi rcsb
source organism Paracoccus denitrificans
total genus 32
structure length 123
sequence length 124
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2010-09-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 3orvC00
1MAEL 2AH1D 2AGWD 2GC4B 2AGZD 2HKMD 4FANC 2IUQD 4FB1C 2J56L 2Q7QD 4K3IC 2MTAL 3RN1C 2AGXD 3L4MC 3RLMC 3L4OC 4L3GC 2OJYD 3PXWC 3ORVC 4L3HC 4Y5RC 2AGLD 2H47B 2I0TD 2H3XB 3PXTC 2J57K 4FA4C 2J55L 3C75L 4FA1C 2OK6D 2AGYD 2HJBD 2OIZD 2AH0D 1MG2B 1MG3B 1MAFL 2IURD 2MADL 2I0RD 3RMZC 2I0SD 3SXTC 3SLEC 4FA9C 2GC7B 4L1QC 3SWSC 2HKRD 1MDAL 3PXSC 4FAVC 3SVWC 2IUPD 2IAAB 3RN0C 2BBKL 3SJLC 2HJ4D 4O1QC 4FA5C 2HXCD 2IUVD 2OK4D
chains in the Genus database with same CATH superfamily
1MAEL 2AH1D 2AGWD 2GC4B 2AGZD 2HKMD 4FANC 2IUQD 4FB1C 2J56L 2Q7QD 4K3IC 2MTAL 3RN1C 2AGXD 3L4MC 3RLMC 3L4OC 4L3GC 2OJYD 3PXWC 3ORVC 4L3HC 4Y5RC 2AGLD 2H47B 2I0TD 2H3XB 3PXTC 2J57K 4FA4C 2J55L 3C75L 4FA1C 2OK6D 2AGYD 2HJBD 2OIZD 2AH0D 1MG2B 1MG3B 1MAFL 2IURD 2MADL 2I0RD 3RMZC 2I0SD 3SXTC 3SLEC 4FA9C 2GC7B 4L1QC 3SWSC 2HKRD 1MDAL 3PXSC 4FAVC 3SVWC 2IUPD 2IAAB 3RN0C 2BBKL 3SJLC 2HJ4D 4O1QC 4FA5C 2HXCD 2IUVD 2OK4D
chains in the Genus database with same CATH topology
1MAEL 2AH1D 2AGWD 2GC4B 2AGZD 2HKMD 4FANC 2IUQD 4FB1C 2J56L 2Q7QD 4K3IC 2MTAL 3RN1C 2AGXD 3L4MC 3RLMC 3L4OC 4L3GC 2OJYD 3PXWC 3ORVC 4L3HC 4Y5RC 2AGLD 2H47B 2I0TD 2H3XB 3PXTC 2J57K 4FA4C 2J55L 3C75L 4FA1C 2OK6D 2AGYD 2HJBD 2OIZD 2AH0D 1MG2B 1MG3B 1MAFL 2IURD 2MADL 2I0RD 3RMZC 2I0SD 3SXTC 3SLEC 4FA9C 2GC7B 4L1QC 3SWSC 2HKRD 1MDAL 3PXSC 4FAVC 3SVWC 2IUPD 2IAAB 3RN0C 2BBKL 3SJLC 2HJ4D 4O1QC 4FA5C 2HXCD 2IUVD 2OK4D
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MAE L;  2AH1 D;  2AGW D;  2GC4 B;  2AGZ D;  2HKM D;  4FAN C;  2IUQ D;  4FB1 C;  2J56 L;  2Q7Q D;  4K3I C;  2MTA L;  3RN1 C;  2AGX D;  3L4M C;  3RLM C;  3L4O C;  4L3G C;  2OJY D;  3PXW C;  3ORV C;  4L3H C;  4Y5R C;  2AGL D;  2H47 B;  2I0T D;  2H3X B;  3PXT C;  2J57 K;  4FA4 C;  2J55 L;  3C75 L;  4FA1 C;  2OK6 D;  2AGY D;  2HJB D;  2OIZ D;  2AH0 D;  1MG2 B;  1MG3 B;  1MAF L;  2IUR D;  2MAD L;  2I0R D;  3RMZ C;  2I0S D;  3SXT C;  3SLE C;  4FA9 C;  2GC7 B;  4L1Q C;  3SWS C;  2HKR D;  1MDA L;  3PXS C;  4FAV C;  3SVW C;  2IUP D;  2IAA B;  3RN0 C;  2BBK L;  3SJL C;  2HJ4 D;  4O1Q C;  4FA5 C;  2HXC D;  2IUV D;  2OK4 D; 
#chains in the Genus database with same CATH topology
 1MAE L;  2AH1 D;  2AGW D;  2GC4 B;  2AGZ D;  2HKM D;  4FAN C;  2IUQ D;  4FB1 C;  2J56 L;  2Q7Q D;  4K3I C;  2MTA L;  3RN1 C;  2AGX D;  3L4M C;  3RLM C;  3L4O C;  4L3G C;  2OJY D;  3PXW C;  3ORV C;  4L3H C;  4Y5R C;  2AGL D;  2H47 B;  2I0T D;  2H3X B;  3PXT C;  2J57 K;  4FA4 C;  2J55 L;  3C75 L;  4FA1 C;  2OK6 D;  2AGY D;  2HJB D;  2OIZ D;  2AH0 D;  1MG2 B;  1MG3 B;  1MAF L;  2IUR D;  2MAD L;  2I0R D;  3RMZ C;  2I0S D;  3SXT C;  3SLE C;  4FA9 C;  2GC7 B;  4L1Q C;  3SWS C;  2HKR D;  1MDA L;  3PXS C;  4FAV C;  3SVW C;  2IUP D;  2IAA B;  3RN0 C;  2BBK L;  3SJL C;  2HJ4 D;  4O1Q C;  4FA5 C;  2HXC D;  2IUV D;  2OK4 D; 
#chains in the Genus database with same CATH homology
 1MAE L;  2AH1 D;  2AGW D;  2GC4 B;  2AGZ D;  2HKM D;  4FAN C;  2IUQ D;  4FB1 C;  2J56 L;  2Q7Q D;  4K3I C;  2MTA L;  3RN1 C;  2AGX D;  3L4M C;  3RLM C;  3L4O C;  4L3G C;  2OJY D;  3PXW C;  3ORV C;  4L3H C;  4Y5R C;  2AGL D;  2H47 B;  2I0T D;  2H3X B;  3PXT C;  2J57 K;  4FA4 C;  2J55 L;  3C75 L;  4FA1 C;  2OK6 D;  2AGY D;  2HJB D;  2OIZ D;  2AH0 D;  1MG2 B;  1MG3 B;  1MAF L;  2IUR D;  2MAD L;  2I0R D;  3RMZ C;  2I0S D;  3SXT C;  3SLE C;  4FA9 C;  2GC7 B;  4L1Q C;  3SWS C;  2HKR D;  1MDA L;  3PXS C;  4FAV C;  3SVW C;  2IUP D;  2IAA B;  3RN0 C;  2BBK L;  3SJL C;  2HJ4 D;  4O1Q C;  4FA5 C;  2HXC D;  2IUV D;  2OK4 D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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