3OVOA

Refined x-ray crystal structures of the reactive site modified ovomucoid inhibitor third domains from silver pheasant (omsvp3(asterisk)) and from japanese quail (omjpq3(asterisk))
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACPKDYRPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Proteinase inhibitor (kazal)
molecule keywords OVOMUCOID THIRD DOMAIN CLEAVED RDI
publication title Refined X-ray crystal structures of the reactive site modified ovomucoid inhibitor third domains from silver pheasant (OMSVP3*) and from Japanese quail (OMJPQ3*).
pubmed doi rcsb
source organism Coturnix japonica
total genus 12
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1991-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3ovoA00
2JYYA 1FYBA 1TBRR 1CGJI 1LR7A 1OMTA 2KMRA 5JHWC 1BUSA 1CSOI 2SGFI 2SGEI 1UVGA 2GKRI 1CGII 1IY5A 1SGPI 1HJAI 1UUCA 4OVOA 1CT4I 2JZMA 3TJQA 1IW4A 1TBQR 2P6AC 1CHOI 2ARPF 1Z7KB 4HGUA 1TIHA 1PPFI 1YTPA 1LR8A 2XRCA 3OVOA 2B0UC 1NUBA 2N17A 1PCEA 1TUSA 1M8CA 3SGBI 1Y1BA 3SGQI 1AN1I 2KMOA 1Y1CA 1OMUA 1MT1A 2NU3I 2NU1I 3SEKC 2ERWA 1N13A 3B4VC 2KCXA 2F3CI 2SGDI 1OYVI 1BMOA 2BUSA 1M8BA 2QQCA 2LEOA 4SGBI 2KMQA 2GKTI 1SGYI 1UVFA 1KMAA 2N71A 2M5XA 5DAEA 1H0ZA 1CT0I 2KMPA 2SGPI 1TURA 4GI3C 1DS2I 1IY6A 1DS3I 2JXDA 1CT2I 1SGDI 2SGQI 1OVOA 1PJUA 1YU6C 2N52A 1CE3A 2NU2I 1SGNI 1LR9A 2GKVA 2OVOA 2WCYA 1SGEI 2QQDA 1HPTA 1HDLA 3QTLD 2NU4I 2NU0I 1SGQI 1TGSI 1R0RI 2V53A 1SGRI 3HH2C
chains in the Genus database with same CATH superfamily
3VE5A 3BJIA 2JYYA 4B6DA 2ROWA 1K7VA 2OD1A 3FSXA 1TBRR 2GVIA 2ORVA 1FYBA 1HEVA 1CGJI 2WGCA 4L9MA 5FUYA 1LR7A 2RIJA 1OMTA 2KMRA 2W0TA 5JHWC 1ULNA 2FNFX 1BUSA 1CSOI 2SGFI 1P9ZA 1WGCA 3UEJA 2SGEI 2QPOA 1R79A 1UVGA 1WKXA 2GKRI 3E59A 4UXJA 4WP4A 1CGII 1IY5A 1VDDA 2GIVA 2K9HA 2YUUA 3OL0A 4UXHA 2E5RA 5EX3A 2L8EA 1SGPI 5J8FA 1HJAI 1UUCA 4OVOA 2Y0MA 1CT4I 2JZMA 3TJQA 2WVJA 1TBQR 4FKDA 2P6AC 5HQ8A 1IW4A 2LUYA 3CXLA 3UGIA 1CHOI 2ARPF 5E3PA 1Z7KB 3KY9A 1W3SA 3MEKA 3OXFA 2ENZA 2DIPA 1ULMA 2V1CC 4HGUA 9WGAA 2A20A 2VRWB 4AMLA 1TIHA 1PPFI 1YTPA 5CCMA 1LR8A 1RFHA 2XRCA 3OVOA 3UGDA 3FC3A 2B0UC 4A24A 1TBNA 5HI7A 1FY7A 1NUBA 3OXLA 1PTRA 5FUWA 2DKVA 3UGLA 2N17A 3PDNA 1X4SA 2J87A 3RU0A 1UHAA 2CWGA 1K7TA 3FSYA 1PCEA 1TUSA 5FUXA 1KBFA 1M8CA 3SGBI 1Y1BA 2V1CA 3SGQI 1X74A 1U5KA 1AN1I 2KMOA 1Y1CA 1OMUA 2DB6A 2L7XA 3QWPA 2B8TA 1MJAA 1MT1A 1Z2IA 2LB7A 3TOBA 2X52A 2NU3I 3TO9A 2NU1I 3SEKC 2X3TA 3OXGA 3UOEA 1W4RA 2ERWA 2CWHA 1N13A 2ORWA 1PTQA 3B4VC 2KCXA 2F3CI 2JW6A 2OU2A 5FUVA 1S20A 2QQEA 2SGDI 3R5CA 5EX0A 3VDUA 1OYVI 1BMOA 2BUSA 1M8BA 2QQCA 2LEOA 2UZ3A 4DNCA 4SGBI 2ODDA 2YQPA 2KMQA 1V1IA 4JCVE 2GKTI 3TO7A 1SGYI 1UVFA 2OZUA 2N1AB 1KMAA 1XX6A 2N71A 1P9GA 1TOTA 2M5XA 2ELIA 5DAEA 2CJSC 1FARA 1KBEA 1H0ZA 1CT0I 2E73A 2KMPA 4MPIA 3UEYA 1TBOA 2SGPI 3QAHA 1TURA 2J9RA 3R5BA 1V1HA 2RC4A 5E3RA 3TO6A 3TOAA 4GI3C 1DS2I 1WGTA 1DS3I 1IY6A 1WTJA 2JXDA 4E1PA 1CT2I 2CWFA 4E1RA 1SGDI 2SGQI 3GOXA 2QQ0A 1OVOA 1Q9BA 1PJUA 1YU6C 1Y8FA 2N52A 1CE3A 2NU2I 1XA6A 3R5DA 1SGNI 5E3QA 1LR9A 3D00A 1MJ9A 1MJBA 3R5AA 2GKVA 2OVOA 2WCYA 1SGEI 1FAQA 5J8CA 2JA1A 2QQDA 3VDPA 1HPTA 5CCLA 2PQ8A 3E2IA 1HDLA 1NXUA 1ULKA 2UVOA 3QTLD 1K7UA 3UFFA 2NU4I 2NU0I 1SGQI 7WGAA 1XBTA 1TGSI 1R0RI 4UXIA 2ENNA 2V53A 1SGRI 3HH2C
chains in the Genus database with same CATH topology
3VE5A 3BJIA 2JYYA 4B6DA 2ROWA 2OD1A 1FYBA 1TBRR 2GVIA 2ORVA 1CGJI 4L9MA 5FUYA 1LR7A 1OMTA 2KMRA 2W0TA 5JHWC 2FNFX 1BUSA 1CSOI 2SGFI 3UEJA 2SGEI 2QPOA 1R79A 1UVGA 2GKRI 3E59A 4UXJA 1CGII 1IY5A 1VDDA 2K9HA 2YUUA 3OL0A 4UXHA 2E5RA 5EX3A 2L8EA 1SGPI 1HJAI 1UUCA 4OVOA 1CT4I 2JZMA 3TJQA 2WVJA 1TBQR 4FKDA 2P6AC 5HQ8A 1IW4A 2LUYA 3CXLA 3UGIA 1CHOI 2ARPF 1Z7KB 3KY9A 1W3SA 3MEKA 3OXFA 2ENZA 2DIPA 2V1CC 4HGUA 2A20A 2VRWB 5CCMA 1TIHA 1PPFI 1YTPA 1LR8A 1RFHA 2XRCA 3OVOA 3UGDA 3FC3A 2B0UC 4A24A 1TBNA 5HI7A 1NUBA 3OXLA 1PTRA 5FUWA 3UGLA 2N17A 3PDNA 1X4SA 2J87A 3RU0A 1PCEA 1TUSA 5FUXA 1KBFA 1M8CA 3SGBI 1Y1BA 2V1CA 3SGQI 1X74A 1U5KA 1AN1I 2KMOA 1Y1CA 1OMUA 2DB6A 2L7XA 3QWPA 2B8TA 1MT1A 2NU3I 2NU1I 3SEKC 3OXGA 1W4RA 2ERWA 1N13A 2ORWA 1PTQA 3B4VC 2KCXA 2F3CI 2JW6A 5FUVA 2QQEA 2SGDI 5EX0A 3VDUA 1OYVI 1BMOA 2BUSA 1M8BA 2QQCA 2LEOA 2UZ3A 4SGBI 2ODDA 2YQPA 2KMQA 1V1IA 4JCVE 2GKTI 1SGYI 1UVFA 2N1AB 1KMAA 1XX6A 2N71A 1TOTA 2M5XA 5DAEA 2ELIA 2CJSC 1FARA 1KBEA 1H0ZA 1CT0I 2E73A 2KMPA 3UEYA 1TBOA 2SGPI 1TURA 2J9RA 1V1HA 4GI3C 1DS2I 1IY6A 1DS3I 2JXDA 4E1PA 1CT2I 4E1RA 1SGDI 2SGQI 3GOXA 2QQ0A 1OVOA 1PJUA 1YU6C 1Y8FA 2N52A 1CE3A 2NU2I 1XA6A 1SGNI 1LR9A 3D00A 2GKVA 2OVOA 2WCYA 1SGEI 1FAQA 2JA1A 2QQDA 3VDPA 1HPTA 5CCLA 3E2IA 1HDLA 3UFFA 3QTLD 2NU4I 2NU0I 1SGQI 1XBTA 1TGSI 1R0RI 4UXIA 2ENNA 2V53A 1SGRI 3HH2C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JYY A;  1FYB A;  1TBR R;  1CGJ I;  1LR7 A;  1OMT A;  2KMR A;  5JHW C;  1BUS A;  1CSO I;  2SGF I;  2SGE I;  1UVG A;  2GKR I;  1CGI I;  1IY5 A;  1SGP I;  1HJA I;  1UUC A;  4OVO A;  1CT4 I;  2JZM A;  3TJQ A;  1IW4 A;  1TBQ R;  2P6A C;  1CHO I;  2ARP F;  1Z7K B;  4HGU A;  1TIH A;  1PPF I;  1YTP A;  1LR8 A;  2XRC A;  3OVO A;  2B0U C;  1NUB A;  2N17 A;  1PCE A;  1TUS A;  1M8C A;  3SGB I;  1Y1B A;  3SGQ I;  1AN1 I;  2KMO A;  1Y1C A;  1OMU A;  1MT1 A;  2NU3 I;  2NU1 I;  3SEK C;  2ERW A;  1N13 A;  3B4V C;  2KCX A;  2F3C I;  2SGD I;  1OYV I;  1BMO A;  2BUS A;  1M8B A;  2QQC A;  2LEO A;  4SGB I;  2KMQ A;  2GKT I;  1SGY I;  1UVF A;  1KMA A;  2N71 A;  2M5X A;  5DAE A;  1H0Z A;  1CT0 I;  2KMP A;  2SGP I;  1TUR A;  4GI3 C;  1DS2 I;  1IY6 A;  1DS3 I;  2JXD A;  1CT2 I;  1SGD I;  2SGQ I;  1OVO A;  1PJU A;  1YU6 C;  2N52 A;  1CE3 A;  2NU2 I;  1SGN I;  1LR9 A;  2GKV A;  2OVO A;  2WCY A;  1SGE I;  2QQD A;  1HPT A;  1HDL A;  3QTL D;  2NU4 I;  2NU0 I;  1SGQ I;  1TGS I;  1R0R I;  2V53 A;  1SGR I;  3HH2 C; 
#chains in the Genus database with same CATH topology
 3VE5 A;  3BJI A;  2JYY A;  4B6D A;  2ROW A;  1K7V A;  2OD1 A;  3FSX A;  1TBR R;  2GVI A;  2ORV A;  1FYB A;  1HEV A;  1CGJ I;  2WGC A;  4L9M A;  5FUY A;  1LR7 A;  2RIJ A;  1OMT A;  2KMR A;  2W0T A;  5JHW C;  1ULN A;  2FNF X;  1BUS A;  1CSO I;  2SGF I;  1P9Z A;  1WGC A;  3UEJ A;  2SGE I;  2QPO A;  1R79 A;  1UVG A;  1WKX A;  2GKR I;  3E59 A;  4UXJ A;  4WP4 A;  1CGI I;  1IY5 A;  1VDD A;  2GIV A;  2K9H A;  2YUU A;  3OL0 A;  4UXH A;  2E5R A;  5EX3 A;  2L8E A;  1SGP I;  5J8F A;  1HJA I;  1UUC A;  4OVO A;  2Y0M A;  1CT4 I;  2JZM A;  3TJQ A;  2WVJ A;  1TBQ R;  4FKD A;  2P6A C;  5HQ8 A;  1IW4 A;  2LUY A;  3CXL A;  3UGI A;  1CHO I;  2ARP F;  5E3P A;  1Z7K B;  3KY9 A;  1W3S A;  3MEK A;  3OXF A;  2ENZ A;  2DIP A;  1ULM A;  2V1C C;  4HGU A;  9WGA A;  2A20 A;  2VRW B;  4AML A;  1TIH A;  1PPF I;  1YTP A;  5CCM A;  1LR8 A;  1RFH A;  2XRC A;  3OVO A;  3UGD A;  3FC3 A;  2B0U C;  4A24 A;  1TBN A;  5HI7 A;  1FY7 A;  1NUB A;  3OXL A;  1PTR A;  5FUW A;  2DKV A;  3UGL A;  2N17 A;  3PDN A;  1X4S A;  2J87 A;  3RU0 A;  1UHA A;  2CWG A;  1K7T A;  3FSY A;  1PCE A;  1TUS A;  5FUX A;  1KBF A;  1M8C A;  3SGB I;  1Y1B A;  2V1C A;  3SGQ I;  1X74 A;  1U5K A;  1AN1 I;  2KMO A;  1Y1C A;  1OMU A;  2DB6 A;  2L7X A;  3QWP A;  2B8T A;  1MJA A;  1MT1 A;  1Z2I A;  2LB7 A;  3TOB A;  2X52 A;  2NU3 I;  3TO9 A;  2NU1 I;  3SEK C;  2X3T A;  3OXG A;  3UOE A;  1W4R A;  2ERW A;  2CWH A;  1N13 A;  2ORW A;  1PTQ A;  3B4V C;  2KCX A;  2F3C I;  2JW6 A;  2OU2 A;  5FUV A;  1S20 A;  2QQE A;  2SGD I;  3R5C A;  5EX0 A;  3VDU A;  1OYV I;  1BMO A;  2BUS A;  1M8B A;  2QQC A;  2LEO A;  2UZ3 A;  4DNC A;  4SGB I;  2ODD A;  2YQP A;  2KMQ A;  1V1I A;  4JCV E;  2GKT I;  3TO7 A;  1SGY I;  1UVF A;  2OZU A;  2N1A B;  1KMA A;  1XX6 A;  2N71 A;  1P9G A;  1TOT A;  2M5X A;  2ELI A;  5DAE A;  2CJS C;  1FAR A;  1KBE A;  1H0Z A;  1CT0 I;  2E73 A;  2KMP A;  4MPI A;  3UEY A;  1TBO A;  2SGP I;  3QAH A;  1TUR A;  2J9R A;  3R5B A;  1V1H A;  2RC4 A;  5E3R A;  3TO6 A;  3TOA A;  4GI3 C;  1DS2 I;  1WGT A;  1DS3 I;  1IY6 A;  1WTJ A;  2JXD A;  4E1P A;  1CT2 I;  2CWF A;  4E1R A;  1SGD I;  2SGQ I;  3GOX A;  2QQ0 A;  1OVO A;  1Q9B A;  1PJU A;  1YU6 C;  1Y8F A;  2N52 A;  1CE3 A;  2NU2 I;  1XA6 A;  3R5D A;  1SGN I;  5E3Q A;  1LR9 A;  3D00 A;  1MJ9 A;  1MJB A;  3R5A A;  2GKV A;  2OVO A;  2WCY A;  1SGE I;  1FAQ A;  5J8C A;  2JA1 A;  2QQD A;  3VDP A;  1HPT A;  5CCL A;  2PQ8 A;  3E2I A;  1HDL A;  1NXU A;  1ULK A;  2UVO A;  3QTL D;  1K7U A;  3UFF A;  2NU4 I;  2NU0 I;  1SGQ I;  7WGA A;  1XBT A;  1TGS I;  1R0R I;  4UXI A;  2ENN A;  2V53 A;  1SGR I;  3HH2 C; 
#chains in the Genus database with same CATH homology
 3VE5 A;  3BJI A;  2JYY A;  4B6D A;  2ROW A;  2OD1 A;  1FYB A;  1TBR R;  2GVI A;  2ORV A;  1CGJ I;  4L9M A;  5FUY A;  1LR7 A;  1OMT A;  2KMR A;  2W0T A;  5JHW C;  2FNF X;  1BUS A;  1CSO I;  2SGF I;  3UEJ A;  2SGE I;  2QPO A;  1R79 A;  1UVG A;  2GKR I;  3E59 A;  4UXJ A;  1CGI I;  1IY5 A;  1VDD A;  2K9H A;  2YUU A;  3OL0 A;  4UXH A;  2E5R A;  5EX3 A;  2L8E A;  1SGP I;  1HJA I;  1UUC A;  4OVO A;  1CT4 I;  2JZM A;  3TJQ A;  2WVJ A;  1TBQ R;  4FKD A;  2P6A C;  5HQ8 A;  1IW4 A;  2LUY A;  3CXL A;  3UGI A;  1CHO I;  2ARP F;  1Z7K B;  3KY9 A;  1W3S A;  3MEK A;  3OXF A;  2ENZ A;  2DIP A;  2V1C C;  4HGU A;  2A20 A;  2VRW B;  5CCM A;  1TIH A;  1PPF I;  1YTP A;  1LR8 A;  1RFH A;  2XRC A;  3OVO A;  3UGD A;  3FC3 A;  2B0U C;  4A24 A;  1TBN A;  5HI7 A;  1NUB A;  3OXL A;  1PTR A;  5FUW A;  3UGL A;  2N17 A;  3PDN A;  1X4S A;  2J87 A;  3RU0 A;  1PCE A;  1TUS A;  5FUX A;  1KBF A;  1M8C A;  3SGB I;  1Y1B A;  2V1C A;  3SGQ I;  1X74 A;  1U5K A;  1AN1 I;  2KMO A;  1Y1C A;  1OMU A;  2DB6 A;  2L7X A;  3QWP A;  2B8T A;  1MT1 A;  2NU3 I;  2NU1 I;  3SEK C;  3OXG A;  1W4R A;  2ERW A;  1N13 A;  2ORW A;  1PTQ A;  3B4V C;  2KCX A;  2F3C I;  2JW6 A;  5FUV A;  2QQE A;  2SGD I;  5EX0 A;  3VDU A;  1OYV I;  1BMO A;  2BUS A;  1M8B A;  2QQC A;  2LEO A;  2UZ3 A;  4SGB I;  2ODD A;  2YQP A;  2KMQ A;  1V1I A;  4JCV E;  2GKT I;  1SGY I;  1UVF A;  2N1A B;  1KMA A;  1XX6 A;  2N71 A;  1TOT A;  2M5X A;  5DAE A;  2ELI A;  2CJS C;  1FAR A;  1KBE A;  1H0Z A;  1CT0 I;  2E73 A;  2KMP A;  3UEY A;  1TBO A;  2SGP I;  1TUR A;  2J9R A;  1V1H A;  4GI3 C;  1DS2 I;  1IY6 A;  1DS3 I;  2JXD A;  4E1P A;  1CT2 I;  4E1R A;  1SGD I;  2SGQ I;  3GOX A;  2QQ0 A;  1OVO A;  1PJU A;  1YU6 C;  1Y8F A;  2N52 A;  1CE3 A;  2NU2 I;  1XA6 A;  1SGN I;  1LR9 A;  3D00 A;  2GKV A;  2OVO A;  2WCY A;  1SGE I;  1FAQ A;  2JA1 A;  2QQD A;  3VDP A;  1HPT A;  5CCL A;  3E2I A;  1HDL A;  3UFF A;  3QTL D;  2NU4 I;  2NU0 I;  1SGQ I;  1XBT A;  1TGS I;  1R0R I;  4UXI A;  2ENN A;  2V53 A;  1SGR I;  3HH2 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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