3RMZC

Crystal structure of the w199f-maug/pre-methylamine dehydrogenase complex
Total Genus 35
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
131
structure length
130
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKASHHHHHH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Oxidoreductase/electron transport
molecule keywords Methylamine utilization protein MauG
publication title Mutagenesis of tryptophan199 suggests that hopping is required for MauG-dependent tryptophan tryptophylquinone biosynthesis.
pubmed doi rcsb
source organism Paracoccus denitrificans
total genus 35
structure length 130
sequence length 131
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2011-04-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 3rmzC00
4L3GC 3RLMC 2AGZD 2I0SD 2AGLD 4FAVC 4Y5RC 2AH1D 2Q7QD 4FANC 2OK4D 2OJYD 2HJBD 1MAFL 2HXCD 3PXSC 2IUVD 4O1QC 3SJLC 2GC4B 3SXTC 2HKRD 2I0TD 1MG3B 3SVWC 2H47B 4FA1C 2IUQD 4FA5C 3PXTC 4FB1C 3L4OC 4FA9C 2OIZD 3RN1C 2IUPD 1MDAL 3ORVC 2J56L 2MTAL 2IURD 4L3HC 2HJ4D 4L1QC 4FA4C 4K3IC 2GC7B 2IAAB 3L4MC 3RMZC 1MG2B 2HKMD 2J55L 2MADL 2J57K 3C75L 3SWSC 3SLEC 2OK6D 2H3XB 2AGXD 2AGYD 2AH0D 1MAEL 2I0RD 3PXWC 2AGWD 2BBKL 3RN0C
chains in the Genus database with same CATH superfamily
4L3GC 3RLMC 2AGZD 2I0SD 2AGLD 4FAVC 4Y5RC 2AH1D 2Q7QD 4FANC 2OK4D 2OJYD 2HJBD 1MAFL 2HXCD 3PXSC 2IUVD 4O1QC 3SJLC 2GC4B 3SXTC 2HKRD 2I0TD 1MG3B 3SVWC 2H47B 4FA1C 2IUQD 4FA5C 3PXTC 4FB1C 3L4OC 4FA9C 2OIZD 3RN1C 2IUPD 1MDAL 3ORVC 2J56L 2MTAL 2IURD 4L3HC 2HJ4D 4L1QC 4FA4C 4K3IC 2GC7B 2IAAB 3L4MC 3RMZC 1MG2B 2HKMD 2J55L 2MADL 2J57K 3C75L 3SWSC 3SLEC 2OK6D 2H3XB 2AGXD 2AGYD 2AH0D 1MAEL 2I0RD 3PXWC 2AGWD 2BBKL 3RN0C
chains in the Genus database with same CATH topology
4L3GC 3RLMC 2AGZD 2I0SD 2AGLD 4FAVC 4Y5RC 2AH1D 2Q7QD 4FANC 2OK4D 2OJYD 2HJBD 1MAFL 2HXCD 3PXSC 2IUVD 4O1QC 3SJLC 2GC4B 3SXTC 2HKRD 2I0TD 1MG3B 3SVWC 2H47B 4FA1C 2IUQD 4FA5C 3PXTC 4FB1C 3L4OC 4FA9C 2OIZD 3RN1C 2IUPD 1MDAL 3ORVC 2J56L 2MTAL 2IURD 4L3HC 2HJ4D 4L1QC 4FA4C 4K3IC 2GC7B 2IAAB 3L4MC 3RMZC 1MG2B 2HKMD 2J55L 2MADL 2J57K 3C75L 3SWSC 3SLEC 2OK6D 2H3XB 2AGXD 2AGYD 2AH0D 1MAEL 2I0RD 3PXWC 2AGWD 2BBKL 3RN0C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4L3G C;  3RLM C;  2AGZ D;  2I0S D;  2AGL D;  4FAV C;  4Y5R C;  2AH1 D;  2Q7Q D;  4FAN C;  2OK4 D;  2OJY D;  2HJB D;  1MAF L;  2HXC D;  3PXS C;  2IUV D;  4O1Q C;  3SJL C;  2GC4 B;  3SXT C;  2HKR D;  2I0T D;  1MG3 B;  3SVW C;  2H47 B;  4FA1 C;  2IUQ D;  4FA5 C;  3PXT C;  4FB1 C;  3L4O C;  4FA9 C;  2OIZ D;  3RN1 C;  2IUP D;  1MDA L;  3ORV C;  2J56 L;  2MTA L;  2IUR D;  4L3H C;  2HJ4 D;  4L1Q C;  4FA4 C;  4K3I C;  2GC7 B;  2IAA B;  3L4M C;  3RMZ C;  1MG2 B;  2HKM D;  2J55 L;  2MAD L;  2J57 K;  3C75 L;  3SWS C;  3SLE C;  2OK6 D;  2H3X B;  2AGX D;  2AGY D;  2AH0 D;  1MAE L;  2I0R D;  3PXW C;  2AGW D;  2BBK L;  3RN0 C; 
#chains in the Genus database with same CATH topology
 4L3G C;  3RLM C;  2AGZ D;  2I0S D;  2AGL D;  4FAV C;  4Y5R C;  2AH1 D;  2Q7Q D;  4FAN C;  2OK4 D;  2OJY D;  2HJB D;  1MAF L;  2HXC D;  3PXS C;  2IUV D;  4O1Q C;  3SJL C;  2GC4 B;  3SXT C;  2HKR D;  2I0T D;  1MG3 B;  3SVW C;  2H47 B;  4FA1 C;  2IUQ D;  4FA5 C;  3PXT C;  4FB1 C;  3L4O C;  4FA9 C;  2OIZ D;  3RN1 C;  2IUP D;  1MDA L;  3ORV C;  2J56 L;  2MTA L;  2IUR D;  4L3H C;  2HJ4 D;  4L1Q C;  4FA4 C;  4K3I C;  2GC7 B;  2IAA B;  3L4M C;  3RMZ C;  1MG2 B;  2HKM D;  2J55 L;  2MAD L;  2J57 K;  3C75 L;  3SWS C;  3SLE C;  2OK6 D;  2H3X B;  2AGX D;  2AGY D;  2AH0 D;  1MAE L;  2I0R D;  3PXW C;  2AGW D;  2BBK L;  3RN0 C; 
#chains in the Genus database with same CATH homology
 4L3G C;  3RLM C;  2AGZ D;  2I0S D;  2AGL D;  4FAV C;  4Y5R C;  2AH1 D;  2Q7Q D;  4FAN C;  2OK4 D;  2OJY D;  2HJB D;  1MAF L;  2HXC D;  3PXS C;  2IUV D;  4O1Q C;  3SJL C;  2GC4 B;  3SXT C;  2HKR D;  2I0T D;  1MG3 B;  3SVW C;  2H47 B;  4FA1 C;  2IUQ D;  4FA5 C;  3PXT C;  4FB1 C;  3L4O C;  4FA9 C;  2OIZ D;  3RN1 C;  2IUP D;  1MDA L;  3ORV C;  2J56 L;  2MTA L;  2IUR D;  4L3H C;  2HJ4 D;  4L1Q C;  4FA4 C;  4K3I C;  2GC7 B;  2IAA B;  3L4M C;  3RMZ C;  1MG2 B;  2HKM D;  2J55 L;  2MAD L;  2J57 K;  3C75 L;  3SWS C;  3SLE C;  2OK6 D;  2H3X B;  2AGX D;  2AGY D;  2AH0 D;  1MAE L;  2I0R D;  3PXW C;  2AGW D;  2BBK L;  3RN0 C; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...