3S1NC

Rna polymerase ii initiation complex with a 5-nt rna (variant 2)
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1nC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1nC01
3RZOK 4A3IK 5IP7C 4A3FC 4BBRK 5M3MK 4Q4ZA 4C3HK 3HOVC 3GTPK 2PMZL 2YU9C 3K7AC 4C2MK 4A3EK 5C3EK 1YNNA 4Q5SA 4Y52K 4BBSK 1I6HK 4YFXA 4BXXC 4XLPA 4X6AC 4C3IK 2R7ZC 2WAQD 4A3CC 2WAQL 3S1NK 4A3LK 4QIWD 3S15K 4GZYA 4YFKA 2E2HK 1TWCC 1Y1WC 3S1MC 5D4DA 4Y7NK 2NVQK 5IYBK 4C3JK 3GTJC 4A3KK 2WB1L 5C44C 2BE5A 3GTKC 1Y1VK 5IP7K 4A3FK 1TWFK 2NVTC 4LJZA 4YFNA 5TMFA 3HOVK 4A3JC 3CQZC 1TWHC 2E2IC 3M3YC 3S2HC 2JA8K 3M4OK 1K83C 2CW0A 2VUMK 3S2DK 3GTLC 4AYBL 4ZH4A 3I4MC 3HOUK 3GTOK 1I6VA 3FKIK 1TWGC 1TWAK 4X6AK 4A3MK 4OINA 5FLMC 2PMZD 4G7HA 4A3BC 3I4NC 3H0GC 5M5XK 3S1RC 3HOWC 2JA6K 5M5WK 2R93C 4KN4A 5IP9C 1ZYRA 1I50K 3RZDC 3PO3C 4XLNA 3GTJK 1IW7A 4A3DC 3S16C 5C44K 3HKZL 3HKZD 4LK0A 1R9TK 3H3VL 3GTKK 5M5YK 3S14C 3PO2C 3HOYC 4YG2A 5C4XC 3HOXC 2PPBA 4A93C 4A3JK 3CQZK 3M3YK 2R92C 1K83K 3GTMK 2WB1D 3GTLK 2Y0SL 2Y0SD 2NVYC 3I4MK 1WCMC 3GTQC 4BY7C 4OIPA 2E2JC 4LLGA 2YU9K 3K7AK 3DXJA 3HOWK 1SFOC 3S17C 3HOZC 4AYBD 2R93K 5IP9K 4NOIA 4C3HC 4BXXK 3RZDK 4OIQA 5IYCC 2R7ZK 4XSZA 4A3CK 4OIOA 3WODA 2B63C 3GTPC 4A3GC 4A3DK 3GTGC 1YNJA 1TWCK 1Y1WK 4Y52C 2PA8D 2O5IA 2PA8L 3S16K 3S1MK 1BDFA 1I6HC 2A69A 4QJVA 3PO2K 1I3QC 4KN7A 5C4XK 3HOXK 3HOYK 2A6EA 2JA7C 5FJ8K 5C4JC 2R92K 2E2HC 3H3VD 3S1QC 2NVTK 3GTQK 4BY7K 4BY1C 2E2JK 3S2HK 1TWHK 3EQLA 5IYDC 2JA5C 4C3JC 2E2IK 4MEYA 4XSXA 2NVXC 1SFOK 3HOZK 3S17K 1Y1VC 4QJVB 1TWFC 4JK1A 1TWGK 5IYCK 4A3BK 5FLMK 2B63K 3I4NK 3M4OC 3H0GK 2JA8C 4G7OA 3S1RK 3GTGK 4A3GK 3S2DC 2VUMC 4A3IC 3RZOC 4BBRC 1XPPA 2O5JA 1SMYA 3HOUC 3GTOC 3FKIC 1I3QK 1TWAC 4LK1A 4A3MC 2JA7K 3PO3K 4MQ9A 4QIWL 5C4JK 4C2MC 4A3EC 5C3EC 2JA6C 4BBSC 3S1QK 3S14K 4KMUA 1I50C 2A6HA 4C3IC 4BY1K 4A93K 3S1NC 5IYDK 5TMCA 4A3LC 3S15C 2JA5K 2NVXK 1R9TC 2NVYK 4MEXA 4Y7NC 2NVQC 1WCMK 1HQMA 5IYBC 4G7ZA 5M3FK 2A68A 4OIRA 3GTMC 4A3KC
chains in the Genus database with same CATH superfamily
3RZOK 4A3IK 1TWFA 4A3FC 4Q4ZA 4WF9S 4C3HK 4BLAA 3HOVC 4A3EK 1EQRA 5C3EK 3PIOS 4BBSK 3GTOA 3FKIA 1FEUA 3S1NK 2KQ1A 1IBAA 4YFKA 1J6VA 3S1MC 5D4DA 2V6SA 4A3KK 1IQ0A 5C44C 2BE5A 3GTKC 4A3FK 1VH2A 2FQTA 5TMFA 3HOVK 3M4OK 1WIHA 3GTLC 3LAPA 1TWGC 4OINA 5DM6S 3HOWC 2R93C 1I50K 1ZXOA 3RZDC 4P9SA 1DD5A 2KPUA 1USMA 1EK8A 5IORA 5C44K 3HKZL 3HKZD 4LK0A 1R9TK 1YX2A 3GTKK 3AD9C 5C4XC 4A93C 3GTKA 2R92C 2WB1D 4ILDA 3GTLK 1F93A 4IOCS 1XXBA 1O26A 1XZPA 3GTLA 3DXJA 3HOWK 3AQPA 4AYBD 2R93K 2L5NA 1TWGA 4KC6A 4OIQA 1BS2A 3RZDK 4FM9A 2R7ZK 5HL8A 2B63C 3GTPC 2R93A 1Y1WK 2GAHC 5C4XK 5JVHS 4KM9A 2R92K 1XZQA 3H3VD 1DCPA 3S1QC 2PHCB 3S2HK 2R92A 4WCES 3PIPS 1ZQ1C 1V5VA 5JVGS 1Y1VC 4JK1A 3GEHA 2KXYA 2B63K 3S1RK 2VUMC 1PJ5A 4BBRC 1IE0A 1SMYA 1WOPA 3SZYA 3GTPA 1TWAC 3AQOA 2B63A 2ZJPS 4C2MC 4GTCA 4LOWA 3S1QK 4KMUA 3T00A 1RU0A 2NVQC 4GTLA 2L3UA 4G7ZA 3FOFA 1Y1VA 4BBRK 3CF5S 4GTBA 2PMZL 2YU9C 4M1XA 3K7AC 1X31C 4C2MK 4G0WA 2VUMA 3TTGA 1I6HK 1TWAA 2P5MA 4X6AC 3BP8C 2WAQL 2WAQD 4QIWD 2E2HK 3ADAC 2NVQK 4WFBS 3N3YA 3AD8C 2ZUEA 4WJ3M 3GTJC 1TWFK 2NVTC 4YFNA 4A3JC 3CQZC 2CW0A 2V6TA 3S2DK 3LPXA 4ZH4A 3I4MC 3HOUK 4FZBA 1I6VA 3FKIK 4LR2A 3GTOK 4X6AK 2YU9A 4A3BC 5CHPA 2XCQA 5JFEA 3FHZA 4IO9S 3PO3C 3GTJK 4KB4A 3TFHA 1GE9A 5M5YK 3GTJA 1WOOA 2PPBA 3OREA 3CQZK 4A3JK 1J6XA 4KMDA 4O2DA 3I4MK 1WCMC 3CQZA 4OIPA 1WSVA 2E2JC 4GTAA 3A8KA 1SFOC 4GTEA 2ZFZA 5IYCC 3AD7C 3LYWA 1O2AA 1F7VA 3WODA 1J98A 4Y52C 2O5IA 3S1MK 1WQHA 2A69A 4QJVA 1XZPB 3N0CA 1IL2A 5FJ8K 1WOSA 3N0BA 3G4AA 1PJ7A 1VRQC 2E2JK 1O29A 3EQLA 4C3JC 2NVXC 1SFOK 1WCMA 2RGRA 4KASA 1TWGK 4AH6A 2D6FC 5IYCK 1JOEA 1SFOA 2JA8C 4G7OA 1XZQB 3FOEA 1BJTA 1XPPA 2JH3A 1WQGA 4A3MC 3GEEA 2JA6C 3OEPA 1B4BA 4C3IC 1F7UA 4A93K 2CFAA 3LAJA 3S15C 4PAAA 1G51A 2NVXK 5IOTA 5L46A 4WILA 5IYBC 3GIRA 2NVXA 1WORA 4OIRA 5M3MK 3GTMC 2XCRB 1HI9A 1O27A 1AB4A 5JVOA 2GAGC 3GTPK 1ISEA 1YNNA 4YFXA 1EI6A 4BXXC 4XLPA 4C3IK 1USOA 1EH1A 4A3CC 2ZJRS 3S15K 3TFJA 4GZYA 3A8IA 2JA6A 1TWCC 4GTFA 5IYBK 1Y1VK 3ERED 1UV7A 2GSUA 3Q3QA 3M3YC 1TWHC 2E2IC 4IOAS 3GTMA 1EFWA 2VUMK 4BLBA 2P8TA 3A8JA 1VJEA 1TWAK 5FLMC 2PMZD 3I4NC 5M5XK 3H0GC 5M5WK 4KN4A 1JVIA 1ZYRA 4DDQA 3QX3A 4RMFA 1TWCA 1IW7A 4A3DC 3S16C 4WJ4A 3S14C 1YCLA 1O28A 3PO2C 3HOYC 4YG2A 3L4KA 3M3YK 5DM7S 2Y0SL 2Y0SD 2NVYC 1O2FB 3HXAA 4BY7C 1TWHA 4P5AA 2E2IA 4LLGA 4KM8A 2YU9K 3K7AK 3S17C 3HOZC 4C3HC 3H0GA 3G4CA 4OIOA 1DCHA 4A3GC 4P5BA 4A3DK 3S16K 4BKWA 3BP3A 3PO2K 1KQ4A 3HOYK 2A6EA 2JA7C 1JQWA 5C4JC 1XXCA 1VGXA 2NVTK 4BY7K 1C0AA 5IYDC 4KMAA 4MEYA 4XSXA 2NVYA 3S17K 3HOZK 4QJVB 2XCOA 4A3BK 5EGEA 3M4OC 4A3GK 1IS1A 2ZJQS 1PJ6A 3GSIA 3OPFA 2JA7K 5TJ3A 3PO3K 4MQ9A 5C4JK 3T01A 3JSTA 1O25A 1I50C 2JA7A 2ZUFA 5IYDK 5TMCA 4A3LC 3T02A 1O24A 2RH6A 1R9TC 4Y7NC 1WCMK 1HQMA 1ZVUA 5IP7C 4LQYA 2CFAB 5HL7S 3AH5A 3GEIA 4XCHA 4Y52K 4Q5SA 3IPJA 2R7ZC 4A3LK 4WFAS 3DLLS 1WSRA 1Y1WC 2GSNA 1I50A 4Y7NK 2W7VA 1DCOA 4C3JK 4U67S 5CJ9A 1R9TA 5EGHA 2WB1L 5IP7K 4LJZA 3TFIA 3GDZA 3S2HC 2JA8K 3MMLB 1K83C 2V6UA 4AYBL 4PABA 4A3MK 4G7HA 3S1RC 2JA6K 2KWAA 5IP9C 2R7ZA 1ZBSA 4J3NA 3L4JA 4KATA 4XLNA 3S0XA 1Y1WA 1WQFA 3H3VL 3SZZA 1O2BA 2FQOA 3NUHA 4G0VA 3HOXC 3BUEA 2GSOA 5E68A 3GTMK 1K83K 5HQHA 3GTQC 4GFQA 1K83A 1INNA 5IP9K 4NOIA 4BXXK 4KARA 4C45A 4XSZA 4A3CK 3GTGC 1YNJA 1TWCK 2PA8L 2PA8D 1F9NA 1BDFA 1I6HC 4GTDA 1I3QC 4KN7A 3HOXK 1VLOA 4KDDA 4KB2A 2E2HC 5IOSA 4GT9A 3GTQK 4BY1C 1TWHK 4KAWX 3VA7A 2JA5C 2E2IK 1XXAA 3GTQA 1J6WA 1TWFC 5IOQA 5FLMK 3I4NK 3H0GK 3GTGK 3S2DC 3RZOC 4A3IC 2O5JA 2Y3PA 3HOUC 3GTOC 2EBBA 3FKIC 1I3QK 4LK1A 3GTGA 4QIWL 4A3EC 5C3EC 1B4AA 4BBSC 1I3QA 1L0WA 3S14K 4WFNS 4KMHA 2A6HA 4BY1K 3S1NC 1BGWA 2JA5K 2E2HA 3CAGA 3V4GA 2NVYK 4MEXA 4G0UA 2JA5A 5M3FK 2A68A 4A3KC
chains in the Genus database with same CATH topology
3RZOK 4A3IK 5IP7C 4A3FC 4BBRK 5M3MK 4Q4ZA 4C3HK 3HOVC 3GTPK 2PMZL 2YU9C 3K7AC 4C2MK 4A3EK 5C3EK 1YNNA 4Q5SA 4Y52K 4BBSK 1I6HK 4YFXA 4BXXC 4XLPA 4X6AC 4C3IK 2R7ZC 2WAQD 4A3CC 2WAQL 3S1NK 4A3LK 4QIWD 3S15K 4GZYA 4YFKA 2E2HK 1TWCC 1Y1WC 3S1MC 5D4DA 4Y7NK 2NVQK 5IYBK 4C3JK 3GTJC 4A3KK 2WB1L 5C44C 2BE5A 3GTKC 1Y1VK 5IP7K 4A3FK 1TWFK 2NVTC 4LJZA 4YFNA 5TMFA 3HOVK 4A3JC 3CQZC 1TWHC 2E2IC 3M3YC 3S2HC 2JA8K 3M4OK 1K83C 2CW0A 2VUMK 3S2DK 3GTLC 4AYBL 4ZH4A 3I4MC 3HOUK 3GTOK 1I6VA 3FKIK 1TWGC 1TWAK 4X6AK 4A3MK 4OINA 5FLMC 2PMZD 4G7HA 4A3BC 3I4NC 3H0GC 5M5XK 3S1RC 3HOWC 2JA6K 5M5WK 2R93C 4KN4A 5IP9C 1ZYRA 1I50K 3RZDC 3PO3C 4XLNA 3GTJK 1IW7A 4A3DC 3S16C 5C44K 3HKZL 3HKZD 4LK0A 1R9TK 3H3VL 3GTKK 5M5YK 3S14C 3PO2C 3HOYC 4YG2A 5C4XC 3HOXC 2PPBA 4A93C 4A3JK 3CQZK 3M3YK 2R92C 1K83K 3GTMK 2WB1D 3GTLK 2Y0SL 2Y0SD 2NVYC 3I4MK 1WCMC 3GTQC 4BY7C 4OIPA 2E2JC 4LLGA 2YU9K 3K7AK 3DXJA 3HOWK 1SFOC 3S17C 3HOZC 4AYBD 2R93K 5IP9K 4NOIA 4C3HC 4BXXK 3RZDK 4OIQA 5IYCC 2R7ZK 4XSZA 4A3CK 4OIOA 3WODA 2B63C 3GTPC 4A3GC 4A3DK 3GTGC 1YNJA 1TWCK 1Y1WK 4Y52C 2PA8D 2O5IA 2PA8L 3S16K 3S1MK 1BDFA 1I6HC 2A69A 4QJVA 3PO2K 1I3QC 4KN7A 5C4XK 3HOXK 3HOYK 2A6EA 2JA7C 5FJ8K 5C4JC 2R92K 2E2HC 3H3VD 3S1QC 2NVTK 3GTQK 4BY7K 4BY1C 2E2JK 3S2HK 1TWHK 3EQLA 5IYDC 2JA5C 4C3JC 2E2IK 4MEYA 4XSXA 2NVXC 1SFOK 3HOZK 3S17K 1Y1VC 4QJVB 1TWFC 4JK1A 1TWGK 5IYCK 4A3BK 5FLMK 2B63K 3I4NK 3M4OC 3H0GK 2JA8C 4G7OA 3S1RK 3GTGK 4A3GK 3S2DC 2VUMC 4A3IC 3RZOC 4BBRC 1XPPA 2O5JA 1SMYA 3HOUC 3GTOC 3FKIC 1I3QK 1TWAC 4LK1A 4A3MC 2JA7K 3PO3K 4MQ9A 4QIWL 5C4JK 4C2MC 4A3EC 5C3EC 2JA6C 4BBSC 3S1QK 3S14K 4KMUA 1I50C 2A6HA 4C3IC 4BY1K 4A93K 3S1NC 5IYDK 5TMCA 4A3LC 3S15C 2JA5K 2NVXK 1R9TC 2NVYK 4MEXA 4Y7NC 2NVQC 1WCMK 1HQMA 5IYBC 4G7ZA 5M3FK 2A68A 4OIRA 3GTMC 4A3KC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RZO K;  4A3I K;  5IP7 C;  4A3F C;  4BBR K;  5M3M K;  4Q4Z A;  4C3H K;  3HOV C;  3GTP K;  2PMZ L;  2YU9 C;  3K7A C;  4C2M K;  4A3E K;  5C3E K;  1YNN A;  4Q5S A;  4Y52 K;  4BBS K;  1I6H K;  4YFX A;  4BXX C;  4XLP A;  4X6A C;  4C3I K;  2R7Z C;  2WAQ D;  4A3C C;  2WAQ L;  3S1N K;  4A3L K;  4QIW D;  3S15 K;  4GZY A;  4YFK A;  2E2H K;  1TWC C;  1Y1W C;  3S1M C;  5D4D A;  4Y7N K;  2NVQ K;  5IYB K;  4C3J K;  3GTJ C;  4A3K K;  2WB1 L;  5C44 C;  2BE5 A;  3GTK C;  1Y1V K;  5IP7 K;  4A3F K;  1TWF K;  2NVT C;  4LJZ A;  4YFN A;  5TMF A;  3HOV K;  4A3J C;  3CQZ C;  1TWH C;  2E2I C;  3M3Y C;  3S2H C;  2JA8 K;  3M4O K;  1K83 C;  2CW0 A;  2VUM K;  3S2D K;  3GTL C;  4AYB L;  4ZH4 A;  3I4M C;  3HOU K;  3GTO K;  1I6V A;  3FKI K;  1TWG C;  1TWA K;  4X6A K;  4A3M K;  4OIN A;  5FLM C;  2PMZ D;  4G7H A;  4A3B C;  3I4N C;  3H0G C;  5M5X K;  3S1R C;  3HOW C;  2JA6 K;  5M5W K;  2R93 C;  4KN4 A;  5IP9 C;  1ZYR A;  1I50 K;  3RZD C;  3PO3 C;  4XLN A;  3GTJ K;  1IW7 A;  4A3D C;  3S16 C;  5C44 K;  3HKZ L;  3HKZ D;  4LK0 A;  1R9T K;  3H3V L;  3GTK K;  5M5Y K;  3S14 C;  3PO2 C;  3HOY C;  4YG2 A;  5C4X C;  3HOX C;  2PPB A;  4A93 C;  4A3J K;  3CQZ K;  3M3Y K;  2R92 C;  1K83 K;  3GTM K;  2WB1 D;  3GTL K;  2Y0S L;  2Y0S D;  2NVY C;  3I4M K;  1WCM C;  3GTQ C;  4BY7 C;  4OIP A;  2E2J C;  4LLG A;  2YU9 K;  3K7A K;  3DXJ A;  3HOW K;  1SFO C;  3S17 C;  3HOZ C;  4AYB D;  2R93 K;  5IP9 K;  4NOI A;  4C3H C;  4BXX K;  3RZD K;  4OIQ A;  5IYC C;  2R7Z K;  4XSZ A;  4A3C K;  4OIO A;  3WOD A;  2B63 C;  3GTP C;  4A3G C;  4A3D K;  3GTG C;  1YNJ A;  1TWC K;  1Y1W K;  4Y52 C;  2PA8 D;  2O5I A;  2PA8 L;  3S16 K;  3S1M K;  1BDF A;  1I6H C;  2A69 A;  4QJV A;  3PO2 K;  1I3Q C;  4KN7 A;  5C4X K;  3HOX K;  3HOY K;  2A6E A;  2JA7 C;  5FJ8 K;  5C4J C;  2R92 K;  2E2H C;  3H3V D;  3S1Q C;  2NVT K;  3GTQ K;  4BY7 K;  4BY1 C;  2E2J K;  3S2H K;  1TWH K;  3EQL A;  5IYD C;  2JA5 C;  4C3J C;  2E2I K;  4MEY A;  4XSX A;  2NVX C;  1SFO K;  3HOZ K;  3S17 K;  1Y1V C;  4QJV B;  1TWF C;  4JK1 A;  1TWG K;  5IYC K;  4A3B K;  5FLM K;  2B63 K;  3I4N K;  3M4O C;  3H0G K;  2JA8 C;  4G7O A;  3S1R K;  3GTG K;  4A3G K;  3S2D C;  2VUM C;  4A3I C;  3RZO C;  4BBR C;  1XPP A;  2O5J A;  1SMY A;  3HOU C;  3GTO C;  3FKI C;  1I3Q K;  1TWA C;  4LK1 A;  4A3M C;  2JA7 K;  3PO3 K;  4MQ9 A;  4QIW L;  5C4J K;  4C2M C;  4A3E C;  5C3E C;  2JA6 C;  4BBS C;  3S1Q K;  3S14 K;  4KMU A;  1I50 C;  2A6H A;  4C3I C;  4BY1 K;  4A93 K;  3S1N C;  5IYD K;  5TMC A;  4A3L C;  3S15 C;  2JA5 K;  2NVX K;  1R9T C;  2NVY K;  4MEX A;  4Y7N C;  2NVQ C;  1WCM K;  1HQM A;  5IYB C;  4G7Z A;  5M3F K;  2A68 A;  4OIR A;  3GTM C;  4A3K C; 
#chains in the Genus database with same CATH topology
 3RZO K;  4A3I K;  1TWF A;  4A3F C;  4Q4Z A;  4WF9 S;  4C3H K;  4BLA A;  3HOV C;  4A3E K;  1EQR A;  5C3E K;  3PIO S;  4BBS K;  3GTO A;  3FKI A;  1FEU A;  3S1N K;  2KQ1 A;  1IBA A;  4YFK A;  1J6V A;  3S1M C;  5D4D A;  2V6S A;  4A3K K;  1IQ0 A;  5C44 C;  2BE5 A;  3GTK C;  4A3F K;  1VH2 A;  2FQT A;  5TMF A;  3HOV K;  3M4O K;  1WIH A;  3GTL C;  3LAP A;  1TWG C;  4OIN A;  5DM6 S;  3HOW C;  2R93 C;  1I50 K;  1ZXO A;  3RZD C;  4P9S A;  1DD5 A;  2KPU A;  1USM A;  1EK8 A;  5IOR A;  5C44 K;  3HKZ L;  3HKZ D;  4LK0 A;  1R9T K;  1YX2 A;  3GTK K;  3AD9 C;  5C4X C;  4A93 C;  3GTK A;  2R92 C;  2WB1 D;  4ILD A;  3GTL K;  1F93 A;  4IOC S;  1XXB A;  1O26 A;  1XZP A;  3GTL A;  3DXJ A;  3HOW K;  3AQP A;  4AYB D;  2R93 K;  2L5N A;  1TWG A;  4KC6 A;  4OIQ A;  1BS2 A;  3RZD K;  4FM9 A;  2R7Z K;  5HL8 A;  2B63 C;  3GTP C;  2R93 A;  1Y1W K;  2GAH C;  5C4X K;  5JVH S;  4KM9 A;  2R92 K;  1XZQ A;  3H3V D;  1DCP A;  3S1Q C;  2PHC B;  3S2H K;  2R92 A;  4WCE S;  3PIP S;  1ZQ1 C;  1V5V A;  5JVG S;  1Y1V C;  4JK1 A;  3GEH A;  2KXY A;  2B63 K;  3S1R K;  2VUM C;  1PJ5 A;  4BBR C;  1IE0 A;  1SMY A;  1WOP A;  3SZY A;  3GTP A;  1TWA C;  3AQO A;  2B63 A;  2ZJP S;  4C2M C;  4GTC A;  4LOW A;  3S1Q K;  4KMU A;  3T00 A;  1RU0 A;  2NVQ C;  4GTL A;  2L3U A;  4G7Z A;  3FOF A;  1Y1V A;  4BBR K;  3CF5 S;  4GTB A;  2PMZ L;  2YU9 C;  4M1X A;  3K7A C;  1X31 C;  4C2M K;  4G0W A;  2VUM A;  3TTG A;  1I6H K;  1TWA A;  2P5M A;  4X6A C;  3BP8 C;  2WAQ L;  2WAQ D;  4QIW D;  2E2H K;  3ADA C;  2NVQ K;  4WFB S;  3N3Y A;  3AD8 C;  2ZUE A;  4WJ3 M;  3GTJ C;  1TWF K;  2NVT C;  4YFN A;  4A3J C;  3CQZ C;  2CW0 A;  2V6T A;  3S2D K;  3LPX A;  4ZH4 A;  3I4M C;  3HOU K;  4FZB A;  1I6V A;  3FKI K;  4LR2 A;  3GTO K;  4X6A K;  2YU9 A;  4A3B C;  5CHP A;  2XCQ A;  5JFE A;  3FHZ A;  4IO9 S;  3PO3 C;  3GTJ K;  4KB4 A;  3TFH A;  1GE9 A;  5M5Y K;  3GTJ A;  1WOO A;  2PPB A;  3ORE A;  3CQZ K;  4A3J K;  1J6X A;  4KMD A;  4O2D A;  3I4M K;  1WCM C;  3CQZ A;  4OIP A;  1WSV A;  2E2J C;  4GTA A;  3A8K A;  1SFO C;  4GTE A;  2ZFZ A;  5IYC C;  3AD7 C;  3LYW A;  1O2A A;  1F7V A;  3WOD A;  1J98 A;  4Y52 C;  2O5I A;  3S1M K;  1WQH A;  2A69 A;  4QJV A;  1XZP B;  3N0C A;  1IL2 A;  5FJ8 K;  1WOS A;  3N0B A;  3G4A A;  1PJ7 A;  1VRQ C;  2E2J K;  1O29 A;  3EQL A;  4C3J C;  2NVX C;  1SFO K;  1WCM A;  2RGR A;  4KAS A;  1TWG K;  4AH6 A;  2D6F C;  5IYC K;  1JOE A;  1SFO A;  2JA8 C;  4G7O A;  1XZQ B;  3FOE A;  1BJT A;  1XPP A;  2JH3 A;  1WQG A;  4A3M C;  3GEE A;  2JA6 C;  3OEP A;  1B4B A;  4C3I C;  1F7U A;  4A93 K;  2CFA A;  3LAJ A;  3S15 C;  4PAA A;  1G51 A;  2NVX K;  5IOT A;  5L46 A;  4WIL A;  5IYB C;  3GIR A;  2NVX A;  1WOR A;  4OIR A;  5M3M K;  3GTM C;  2XCR B;  1HI9 A;  1O27 A;  1AB4 A;  5JVO A;  2GAG C;  3GTP K;  1ISE A;  1YNN A;  4YFX A;  1EI6 A;  4BXX C;  4XLP A;  4C3I K;  1USO A;  1EH1 A;  4A3C C;  2ZJR S;  3S15 K;  3TFJ A;  4GZY A;  3A8I A;  2JA6 A;  1TWC C;  4GTF A;  5IYB K;  1Y1V K;  3ERE D;  1UV7 A;  2GSU A;  3Q3Q A;  3M3Y C;  1TWH C;  2E2I C;  4IOA S;  3GTM A;  1EFW A;  2VUM K;  4BLB A;  2P8T A;  3A8J A;  1VJE A;  1TWA K;  5FLM C;  2PMZ D;  3I4N C;  5M5X K;  3H0G C;  5M5W K;  4KN4 A;  1JVI A;  1ZYR A;  4DDQ A;  3QX3 A;  4RMF A;  1TWC A;  1IW7 A;  4A3D C;  3S16 C;  4WJ4 A;  3S14 C;  1YCL A;  1O28 A;  3PO2 C;  3HOY C;  4YG2 A;  3L4K A;  3M3Y K;  5DM7 S;  2Y0S L;  2Y0S D;  2NVY C;  1O2F B;  3HXA A;  4BY7 C;  1TWH A;  4P5A A;  2E2I A;  4LLG A;  4KM8 A;  2YU9 K;  3K7A K;  3S17 C;  3HOZ C;  4C3H C;  3H0G A;  3G4C A;  4OIO A;  1DCH A;  4A3G C;  4P5B A;  4A3D K;  3S16 K;  4BKW A;  3BP3 A;  3PO2 K;  1KQ4 A;  3HOY K;  2A6E A;  2JA7 C;  1JQW A;  5C4J C;  1XXC A;  1VGX A;  2NVT K;  4BY7 K;  1C0A A;  5IYD C;  4KMA A;  4MEY A;  4XSX A;  2NVY A;  3S17 K;  3HOZ K;  4QJV B;  2XCO A;  4A3B K;  5EGE A;  3M4O C;  4A3G K;  1IS1 A;  2ZJQ S;  1PJ6 A;  3GSI A;  3OPF A;  2JA7 K;  5TJ3 A;  3PO3 K;  4MQ9 A;  5C4J K;  3T01 A;  3JST A;  1O25 A;  1I50 C;  2JA7 A;  2ZUF A;  5IYD K;  5TMC A;  4A3L C;  3T02 A;  1O24 A;  2RH6 A;  1R9T C;  4Y7N C;  1WCM K;  1HQM A;  1ZVU A;  5IP7 C;  4LQY A;  2CFA B;  5HL7 S;  3AH5 A;  3GEI A;  4XCH A;  4Y52 K;  4Q5S A;  3IPJ A;  2R7Z C;  4A3L K;  4WFA S;  3DLL S;  1WSR A;  1Y1W C;  2GSN A;  1I50 A;  4Y7N K;  2W7V A;  1DCO A;  4C3J K;  4U67 S;  5CJ9 A;  1R9T A;  5EGH A;  2WB1 L;  5IP7 K;  4LJZ A;  3TFI A;  3GDZ A;  3S2H C;  2JA8 K;  3MML B;  1K83 C;  2V6U A;  4AYB L;  4PAB A;  4A3M K;  4G7H A;  3S1R C;  2JA6 K;  2KWA A;  5IP9 C;  2R7Z A;  1ZBS A;  4J3N A;  3L4J A;  4KAT A;  4XLN A;  3S0X A;  1Y1W A;  1WQF A;  3H3V L;  3SZZ A;  1O2B A;  2FQO A;  3NUH A;  4G0V A;  3HOX C;  3BUE A;  2GSO A;  5E68 A;  3GTM K;  1K83 K;  5HQH A;  3GTQ C;  4GFQ A;  1K83 A;  1INN A;  5IP9 K;  4NOI A;  4BXX K;  4KAR A;  4C45 A;  4XSZ A;  4A3C K;  3GTG C;  1YNJ A;  1TWC K;  2PA8 L;  2PA8 D;  1F9N A;  1BDF A;  1I6H C;  4GTD A;  1I3Q C;  4KN7 A;  3HOX K;  1VLO A;  4KDD A;  4KB2 A;  2E2H C;  5IOS A;  4GT9 A;  3GTQ K;  4BY1 C;  1TWH K;  4KAW X;  3VA7 A;  2JA5 C;  2E2I K;  1XXA A;  3GTQ A;  1J6W A;  1TWF C;  5IOQ A;  5FLM K;  3I4N K;  3H0G K;  3GTG K;  3S2D C;  3RZO C;  4A3I C;  2O5J A;  2Y3P A;  3HOU C;  3GTO C;  2EBB A;  3FKI C;  1I3Q K;  4LK1 A;  3GTG A;  4QIW L;  4A3E C;  5C3E C;  1B4A A;  4BBS C;  1I3Q A;  1L0W A;  3S14 K;  4WFN S;  4KMH A;  2A6H A;  4BY1 K;  3S1N C;  1BGW A;  2JA5 K;  2E2H A;  3CAG A;  3V4G A;  2NVY K;  4MEX A;  4G0U A;  2JA5 A;  5M3F K;  2A68 A;  4A3K C; 
#chains in the Genus database with same CATH homology
 3RZO K;  4A3I K;  5IP7 C;  4A3F C;  4BBR K;  5M3M K;  4Q4Z A;  4C3H K;  3HOV C;  3GTP K;  2PMZ L;  2YU9 C;  3K7A C;  4C2M K;  4A3E K;  5C3E K;  1YNN A;  4Q5S A;  4Y52 K;  4BBS K;  1I6H K;  4YFX A;  4BXX C;  4XLP A;  4X6A C;  4C3I K;  2R7Z C;  2WAQ D;  4A3C C;  2WAQ L;  3S1N K;  4A3L K;  4QIW D;  3S15 K;  4GZY A;  4YFK A;  2E2H K;  1TWC C;  1Y1W C;  3S1M C;  5D4D A;  4Y7N K;  2NVQ K;  5IYB K;  4C3J K;  3GTJ C;  4A3K K;  2WB1 L;  5C44 C;  2BE5 A;  3GTK C;  1Y1V K;  5IP7 K;  4A3F K;  1TWF K;  2NVT C;  4LJZ A;  4YFN A;  5TMF A;  3HOV K;  4A3J C;  3CQZ C;  1TWH C;  2E2I C;  3M3Y C;  3S2H C;  2JA8 K;  3M4O K;  1K83 C;  2CW0 A;  2VUM K;  3S2D K;  3GTL C;  4AYB L;  4ZH4 A;  3I4M C;  3HOU K;  3GTO K;  1I6V A;  3FKI K;  1TWG C;  1TWA K;  4X6A K;  4A3M K;  4OIN A;  5FLM C;  2PMZ D;  4G7H A;  4A3B C;  3I4N C;  3H0G C;  5M5X K;  3S1R C;  3HOW C;  2JA6 K;  5M5W K;  2R93 C;  4KN4 A;  5IP9 C;  1ZYR A;  1I50 K;  3RZD C;  3PO3 C;  4XLN A;  3GTJ K;  1IW7 A;  4A3D C;  3S16 C;  5C44 K;  3HKZ L;  3HKZ D;  4LK0 A;  1R9T K;  3H3V L;  3GTK K;  5M5Y K;  3S14 C;  3PO2 C;  3HOY C;  4YG2 A;  5C4X C;  3HOX C;  2PPB A;  4A93 C;  4A3J K;  3CQZ K;  3M3Y K;  2R92 C;  1K83 K;  3GTM K;  2WB1 D;  3GTL K;  2Y0S L;  2Y0S D;  2NVY C;  3I4M K;  1WCM C;  3GTQ C;  4BY7 C;  4OIP A;  2E2J C;  4LLG A;  2YU9 K;  3K7A K;  3DXJ A;  3HOW K;  1SFO C;  3S17 C;  3HOZ C;  4AYB D;  2R93 K;  5IP9 K;  4NOI A;  4C3H C;  4BXX K;  3RZD K;  4OIQ A;  5IYC C;  2R7Z K;  4XSZ A;  4A3C K;  4OIO A;  3WOD A;  2B63 C;  3GTP C;  4A3G C;  4A3D K;  3GTG C;  1YNJ A;  1TWC K;  1Y1W K;  4Y52 C;  2PA8 D;  2O5I A;  2PA8 L;  3S16 K;  3S1M K;  1BDF A;  1I6H C;  2A69 A;  4QJV A;  3PO2 K;  1I3Q C;  4KN7 A;  5C4X K;  3HOX K;  3HOY K;  2A6E A;  2JA7 C;  5FJ8 K;  5C4J C;  2R92 K;  2E2H C;  3H3V D;  3S1Q C;  2NVT K;  3GTQ K;  4BY7 K;  4BY1 C;  2E2J K;  3S2H K;  1TWH K;  3EQL A;  5IYD C;  2JA5 C;  4C3J C;  2E2I K;  4MEY A;  4XSX A;  2NVX C;  1SFO K;  3HOZ K;  3S17 K;  1Y1V C;  4QJV B;  1TWF C;  4JK1 A;  1TWG K;  5IYC K;  4A3B K;  5FLM K;  2B63 K;  3I4N K;  3M4O C;  3H0G K;  2JA8 C;  4G7O A;  3S1R K;  3GTG K;  4A3G K;  3S2D C;  2VUM C;  4A3I C;  3RZO C;  4BBR C;  1XPP A;  2O5J A;  1SMY A;  3HOU C;  3GTO C;  3FKI C;  1I3Q K;  1TWA C;  4LK1 A;  4A3M C;  2JA7 K;  3PO3 K;  4MQ9 A;  4QIW L;  5C4J K;  4C2M C;  4A3E C;  5C3E C;  2JA6 C;  4BBS C;  3S1Q K;  3S14 K;  4KMU A;  1I50 C;  2A6H A;  4C3I C;  4BY1 K;  4A93 K;  3S1N C;  5IYD K;  5TMC A;  4A3L C;  3S15 C;  2JA5 K;  2NVX K;  1R9T C;  2NVY K;  4MEX A;  4Y7N C;  2NVQ C;  1WCM K;  1HQM A;  5IYB C;  4G7Z A;  5M3F K;  2A68 A;  4OIR A;  3GTM C;  4A3K C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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