3VFQA

Human parp14 (artd8, bal2) - macro domains 1 and 2 in complex with adenosine-5-diphosphoribose
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
401
structure length
375
Chain Sequence
KCFSRTVLAPGVVLIVQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISKAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFKKDGHCLKEIYLVDVSEKTVEAFAEAVKTVFKGSLVSPGGLQMLLVKEGVQNAKTDVVVNSVPLDLVLSRGPLSKSLLEKAGPELQEELDTVGQGVAVSMGTVLKTSSWNLDCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQLKTLQEVHFLLHPSDHENIQAFSDEFARRAN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Poly [ADP-ribose] polymerase 14
publication title Recognition of Mono-ADP-Ribosylated ARTD10 Substrates by ARTD8 Macrodomains.
pubmed doi rcsb
source organism Homo sapiens
total genus 122
structure length 375
sequence length 401
ec nomenclature ec 2.4.2.30: NAD(+) ADP-ribosyltransferase.
pdb deposition date 2012-01-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3vfqA02
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3vfqA01
1ZR3A 3KQZA 2XD7A 4ETJA 5E3BA 4J5RA 1ZR5A 2J9AA 3IIDA 5DUSA 2EEEA 1SPVA 4R6TA 3V2BA 4JGKA 1LANA 1BPMA 2BFRA 4KSIA 1BPNA 5FSVA 4GUAA 4TU0A 2FG1A 4ABKA 3IJ3A 2ACFA 3H8FA 2VRIA 5CB3A 3Q6ZA 1LAMA 3T8WA 5D8NA 1YD9A 4ZY0A 4K3NA 4R76A 3GQEA 4UMLA 4ZY1A 4JCAA 2EWBA 3EKEA 3SIJA 5CBMA 2X47A 3IIFA 3Q71A 4GVWA 4J5QA 4ABLA 4D86A 1LAPA 3KR4A 1GYTA 3GPOA 3EJGA 3KQXA 4ZY2A 5FSXA 3KR5A 3EWOA 3H8GA 3GPGA 1TXZA 1LCPA 3EWRA 3JZTA 4ZYQA 1BLLE 1NJRA 5CB5A 2LGRA 4JVVA 3GPQA 4J4ZA 4JLLA 1VHUA 2BFQA 2L8RA 4J5SA 4KYBA 4X2TA 4ZX8A 5FSYA 3KZWA 5HIHA 4ZI6A 4K0CA 4ETKA 3EWQA 5FSUA 2FAVA 5HOLA 1HJZA 5AILA 4ZX9A 3EJFA 2AFCA 3V45A 4GVVA 4ESSA 5FSZA 3EWPA 2DX6A 4R7MA 3H8EA 3GQOA 5CMSA 3SIHA 3JRUA 3PEIA 1TY8A 3VFQA 2FXKA 3SIIA 3SIGA 3ETIA 4IQYA 3EW5A
chains in the Genus database with same CATH superfamily
1ZR3A 3KQZA 2XD7A 4ETJA 2JZEA 5E3BA 4J5RA 1ZR5A 2J9AA 2JZDA 3IIDA 5DUSA 2EEEA 1SPVA 4R6TA 3V2BA 4JGKA 1LANA 1BPMA 2BFRA 4KSIA 1BPNA 5FSVA 4GUAA 4TU0A 2FG1A 4ABKA 3IJ3A 2ACFA 3H8FA 2VRIA 5CB3A 3Q6ZA 1LAMA 3T8WA 5D8NA 1YD9A 4ZY0A 4K3NA 4R76A 3GQEA 4UMLA 4ZY1A 4JCAA 2EWBA 3EKEA 3SIJA 5CBMA 2X47A 3IIFA 3Q71A 4GVWA 4J5QA 4ABLA 4D86A 2WCTA 1LAPA 3KR4A 1GYTA 3GPOA 3EJGA 3KQXA 4ZY2A 5FSXA 3KR5A 3EWOA 3H8GA 2KQVA 3GPGA 1TXZA 1LCPA 3EWRA 3JZTA 4ZYQA 1BLLE 1NJRA 5CB5A 2LGRA 4JVVA 3GPQA 4J4ZA 4JLLA 1VHUA 2BFQA 2L8RA 4J5SA 4KYBA 4X2TA 4ZX8A 5FSYA 3KZWA 5HIHA 4ZI6A 4K0CA 4ETKA 3EWQA 2RNKA 5FSUA 2FAVA 5HOLA 1HJZA 5AILA 4ZX9A 3EJFA 2AFCA 3V45A 4GVVA 4ESSA 5FSZA 3EWPA 2DX6A 4R7MA 3H8EA 3GQOA 5CMSA 3SIHA 3JRUA 3PEIA 1TY8A 2W2GA 3VFQA 2FXKA 3SIIA 3SIGA 2JZFA 3ETIA 4IQYA 3EW5A
chains in the Genus database with same CATH topology
1ZR3A 3KQZA 2XD7A 4ETJA 5E3BA 4J5RA 1ZR5A 2J9AA 3IIDA 5DUSA 2EEEA 1SPVA 4R6TA 3V2BA 4JGKA 1LANA 1BPMA 2BFRA 4KSIA 1BPNA 5FSVA 4GUAA 4TU0A 2FG1A 4ABKA 3IJ3A 2ACFA 3H8FA 2VRIA 5CB3A 3Q6ZA 1LAMA 3T8WA 5D8NA 1YD9A 4ZY0A 4K3NA 4R76A 3GQEA 4UMLA 4ZY1A 4JCAA 2EWBA 3EKEA 3SIJA 5CBMA 2X47A 3IIFA 3Q71A 4GVWA 4J5QA 4ABLA 4D86A 1LAPA 3KR4A 1GYTA 3GPOA 3EJGA 3KQXA 4ZY2A 5FSXA 3KR5A 3EWOA 3H8GA 3GPGA 1TXZA 1LCPA 3EWRA 3JZTA 4ZYQA 1BLLE 1NJRA 5CB5A 2LGRA 4JVVA 3GPQA 4J4ZA 4JLLA 1VHUA 2BFQA 2L8RA 4J5SA 4KYBA 4X2TA 4ZX8A 5FSYA 3KZWA 5HIHA 4ZI6A 4K0CA 4ETKA 3EWQA 5FSUA 2FAVA 5HOLA 1HJZA 5AILA 4ZX9A 3EJFA 2AFCA 3V45A 4GVVA 4ESSA 5FSZA 3EWPA 2DX6A 4R7MA 3H8EA 3GQOA 5CMSA 3SIHA 3JRUA 3PEIA 1TY8A 3VFQA 2FXKA 3SIIA 3SIGA 3ETIA 4IQYA 3EW5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZR3 A;  3KQZ A;  2XD7 A;  4ETJ A;  5E3B A;  4J5R A;  1ZR5 A;  2J9A A;  3IID A;  5DUS A;  2EEE A;  1SPV A;  4R6T A;  3V2B A;  4JGK A;  1LAN A;  1BPM A;  2BFR A;  4KSI A;  1BPN A;  5FSV A;  4GUA A;  4TU0 A;  2FG1 A;  4ABK A;  3IJ3 A;  2ACF A;  3H8F A;  2VRI A;  5CB3 A;  3Q6Z A;  1LAM A;  3T8W A;  5D8N A;  1YD9 A;  4ZY0 A;  4K3N A;  4R76 A;  3GQE A;  4UML A;  4ZY1 A;  4JCA A;  2EWB A;  3EKE A;  3SIJ A;  5CBM A;  2X47 A;  3IIF A;  3Q71 A;  4GVW A;  4J5Q A;  4ABL A;  4D86 A;  1LAP A;  3KR4 A;  1GYT A;  3GPO A;  3EJG A;  3KQX A;  4ZY2 A;  5FSX A;  3KR5 A;  3EWO A;  3H8G A;  3GPG A;  1TXZ A;  1LCP A;  3EWR A;  3JZT A;  4ZYQ A;  1BLL E;  1NJR A;  5CB5 A;  2LGR A;  4JVV A;  3GPQ A;  4J4Z A;  4JLL A;  1VHU A;  2BFQ A;  2L8R A;  4J5S A;  4KYB A;  4X2T A;  4ZX8 A;  5FSY A;  3KZW A;  5HIH A;  4ZI6 A;  4K0C A;  4ETK A;  3EWQ A;  5FSU A;  2FAV A;  5HOL A;  1HJZ A;  5AIL A;  4ZX9 A;  3EJF A;  2AFC A;  3V45 A;  4GVV A;  4ESS A;  5FSZ A;  3EWP A;  2DX6 A;  4R7M A;  3H8E A;  3GQO A;  5CMS A;  3SIH A;  3JRU A;  3PEI A;  1TY8 A;  3VFQ A;  2FXK A;  3SII A;  3SIG A;  3ETI A;  4IQY A;  3EW5 A; 
#chains in the Genus database with same CATH topology
 1ZR3 A;  3KQZ A;  2XD7 A;  4ETJ A;  2JZE A;  5E3B A;  4J5R A;  1ZR5 A;  2J9A A;  2JZD A;  3IID A;  5DUS A;  2EEE A;  1SPV A;  4R6T A;  3V2B A;  4JGK A;  1LAN A;  1BPM A;  2BFR A;  4KSI A;  1BPN A;  5FSV A;  4GUA A;  4TU0 A;  2FG1 A;  4ABK A;  3IJ3 A;  2ACF A;  3H8F A;  2VRI A;  5CB3 A;  3Q6Z A;  1LAM A;  3T8W A;  5D8N A;  1YD9 A;  4ZY0 A;  4K3N A;  4R76 A;  3GQE A;  4UML A;  4ZY1 A;  4JCA A;  2EWB A;  3EKE A;  3SIJ A;  5CBM A;  2X47 A;  3IIF A;  3Q71 A;  4GVW A;  4J5Q A;  4ABL A;  4D86 A;  2WCT A;  1LAP A;  3KR4 A;  1GYT A;  3GPO A;  3EJG A;  3KQX A;  4ZY2 A;  5FSX A;  3KR5 A;  3EWO A;  3H8G A;  2KQV A;  3GPG A;  1TXZ A;  1LCP A;  3EWR A;  3JZT A;  4ZYQ A;  1BLL E;  1NJR A;  5CB5 A;  2LGR A;  4JVV A;  3GPQ A;  4J4Z A;  4JLL A;  1VHU A;  2BFQ A;  2L8R A;  4J5S A;  4KYB A;  4X2T A;  4ZX8 A;  5FSY A;  3KZW A;  5HIH A;  4ZI6 A;  4K0C A;  4ETK A;  3EWQ A;  2RNK A;  5FSU A;  2FAV A;  5HOL A;  1HJZ A;  5AIL A;  4ZX9 A;  3EJF A;  2AFC A;  3V45 A;  4GVV A;  4ESS A;  5FSZ A;  3EWP A;  2DX6 A;  4R7M A;  3H8E A;  3GQO A;  5CMS A;  3SIH A;  3JRU A;  3PEI A;  1TY8 A;  2W2G A;  3VFQ A;  2FXK A;  3SII A;  3SIG A;  2JZF A;  3ETI A;  4IQY A;  3EW5 A; 
#chains in the Genus database with same CATH homology
 1ZR3 A;  3KQZ A;  2XD7 A;  4ETJ A;  5E3B A;  4J5R A;  1ZR5 A;  2J9A A;  3IID A;  5DUS A;  2EEE A;  1SPV A;  4R6T A;  3V2B A;  4JGK A;  1LAN A;  1BPM A;  2BFR A;  4KSI A;  1BPN A;  5FSV A;  4GUA A;  4TU0 A;  2FG1 A;  4ABK A;  3IJ3 A;  2ACF A;  3H8F A;  2VRI A;  5CB3 A;  3Q6Z A;  1LAM A;  3T8W A;  5D8N A;  1YD9 A;  4ZY0 A;  4K3N A;  4R76 A;  3GQE A;  4UML A;  4ZY1 A;  4JCA A;  2EWB A;  3EKE A;  3SIJ A;  5CBM A;  2X47 A;  3IIF A;  3Q71 A;  4GVW A;  4J5Q A;  4ABL A;  4D86 A;  1LAP A;  3KR4 A;  1GYT A;  3GPO A;  3EJG A;  3KQX A;  4ZY2 A;  5FSX A;  3KR5 A;  3EWO A;  3H8G A;  3GPG A;  1TXZ A;  1LCP A;  3EWR A;  3JZT A;  4ZYQ A;  1BLL E;  1NJR A;  5CB5 A;  2LGR A;  4JVV A;  3GPQ A;  4J4Z A;  4JLL A;  1VHU A;  2BFQ A;  2L8R A;  4J5S A;  4KYB A;  4X2T A;  4ZX8 A;  5FSY A;  3KZW A;  5HIH A;  4ZI6 A;  4K0C A;  4ETK A;  3EWQ A;  5FSU A;  2FAV A;  5HOL A;  1HJZ A;  5AIL A;  4ZX9 A;  3EJF A;  2AFC A;  3V45 A;  4GVV A;  4ESS A;  5FSZ A;  3EWP A;  2DX6 A;  4R7M A;  3H8E A;  3GQO A;  5CMS A;  3SIH A;  3JRU A;  3PEI A;  1TY8 A;  3VFQ A;  2FXK A;  3SII A;  3SIG A;  3ETI A;  4IQY A;  3EW5 A; 
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similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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