3NQNA

Crystal structure of a protein with unknown function. (dr_2006) from deinococcus radiodurans at 1.88 a resolution
Total Genus 36
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
36
sequence length
155
structure length
151
Chain Sequence
LSAEQSFTLRHPHGQAAALAFVREPAAALAGVRFLRGLDSDGEQVWGELLVTVPLLGEVDLPFRSEIVRTPQGAELRPLTLTGERAWVAVSGQATAAEGGEMAFAFQFQAHLAEGWGGAAFEKMVQAAAGRTLERVAKALPEGLAAGLPPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of a Protein with unknown function. (DR_2006) from DEINOCOCCUS RADIODURANS at 1.88 A resolution
rcsb
molecule tags Structural genomics, unknown function
source organism Deinococcus radiodurans
molecule keywords uncharacterized protein
total genus 36
structure length 151
sequence length 155
chains with identical sequence B
ec nomenclature
pdb deposition date 2010-06-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12723 DUF3809 Protein of unknown function (DUF3809)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.530.70 Alpha Beta 2-Layer Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 3nqnA00
3NQNA
chains in the Genus database with same CATH superfamily
2L8OA 4E6FA 3GKEA 1XUVA 2Z9ZA 3UQHA 1H2OA 1ZXFA 3W9KA 3H3QA 2KCZA 3F08A 3KDJA 4WVOA 2LUZA 3GL2A 4A80A 3H3RA 4LA7A 3UIDA 4RYVA 2IL5A 3WG8A 3NEGA 4A8GA 2PSOA 4BK6A 5I9JA 4JHYA 3NMNA 4A87A 3NR4A 2R55A 2LCGA 4BKDA 3Q6AA 1FM4A 1LN3A 4XRTA 1VJHA 3TL1A 1Z94A 3GTEA 2K7HA 4Y31A 4M9BA 2LEQA 2D4RA 3F73A 3R6PA 2KEWA 3ELIA 2LGHA 1BV1A 4JHIA 3NS2A 4QDCA 4A8UA 3NJ0A 2FLHA 5EKQC 3DLHA 4KPYA 2E3MA 3KAZA 3RT2A 3TVRA 4NCBA 2RESA 4REHA 4R7KA 2KTEA 3Q63A 2E3QA 4FPWA 3NMVA 2QIMA 3HXMA 2LE1A 1TXCA 2FFSA 3JRQB 3KB0A 3KLXA 3GTSA 3NMPA 3RT0C 2LDKA 4NCAA 1KCMA 4PSBA 2YH6A 3TVQA 4IGWA 2N4AA 4A85A 3DLBA 4A8VA 2BK0A 2REZA 3NMTA 4IGYA 5JNNA 4QDFB 3NMHA 3FO5A 1T17A 2LAFA 1FSKA 1XDFA 4MNSA 2E3NA 2E3PA 2WQLA 2PCSA 3UJLA 5JO2A 3Q64A 4JHGA 2A1LA 4IH2A 4OICA 2GKDA 4QIPA 1ICXA 2M47A 4IGXA 2LPXA 4QCKA 4Z3LA 4MA6A 4LGAA 2KF2A 5AMWA 2QPVA 4N0GC 4A86A 3GGNA 4JHHA 3JRSA 3KAYA 3QN1A 1EM2A 2LIOA 3KDIA 5BRLA 3TGOC 3NI8A 3CNWA 1UW5A 4REIA 1T27A 4MAPA 2RERA 3KB3A 1XFSA 3PU2A 4M9WA 4N76A 4DSBA 3OTLA 4LGBA 1LN2A 2N4BA 4LG5A 2L9PA 3W9RA 3ZVUA 4C9IA 3KDHA 4N47A 5E4MA 3HO1A 3E85A 1XN5A 2M89A 2ZYLA 4JDAA 2E3RA 4B9RA 1TW0A 4DSCA 1LLTA 3IJTA 4BK7A 3PUTA 2I9YA 3K90A 2MOUA 4A83A 2E3OA 4XRWA 2E3SA 3GL0A 4BTZA 4JDLA 2L65A 2NN5A 2Z9YA 3GOBA 4QDFA 4QDDA 4A88A 4A81A 3OH8A 4IGVA 1JSSA 1LN1A 4REJA 3NJOA 4N3EA 1QMRA 3NQNA 5C9YA 3NEFA 4N41A 3P0LA 1E09A 2LAKA 1B6FA 3P9VA 3H3SA 2EJXA 3K3KA 3OQUA 5JO1A 2K5GA 2VQ5A 3HM9A 3C0VA 4DS8A 1XN6A 4A84A 3RD6A 3HJFA 4IH0A 5E4BA 3HVRA 3OJIA 5I8FA 1X53A 2LF2A 3QSZA 4GY9A 4C94A 3GB4A 3HK2A 2Q3QA 3NJ1A 5E46A 2NS9A 1BTVA 3H3TA 2VNEA 3TFZA 3IE5A 1IFVA 4Q0KA 4BKCA 3KL1A 3P51A 4IHRA 4C9CA 5E4DA
chains in the Genus database with same CATH topology
2L8OA 4E6FA 3GKEA 1XUVA 2Z9ZA 3UQHA 1H2OA 1ZXFA 3W9KA 3H3QA 2KCZA 3F08A 3KDJA 4WVOA 2LUZA 3GL2A 4A80A 3H3RA 4LA7A 3UIDA 4RYVA 2IL5A 3WG8A 3NEGA 4A8GA 2PSOA 4BK6A 5I9JA 4JHYA 3NMNA 4A87A 3NR4A 2R55A 2LCGA 4BKDA 3Q6AA 1FM4A 1LN3A 4XRTA 1VJHA 3TL1A 1Z94A 3GTEA 2K7HA 4Y31A 4M9BA 2LEQA 2D4RA 3F73A 3R6PA 2KEWA 3ELIA 2LGHA 1BV1A 4JHIA 3NS2A 4QDCA 4A8UA 3NJ0A 2FLHA 5EKQC 3DLHA 4KPYA 2E3MA 3KAZA 3RT2A 3TVRA 4NCBA 2RESA 4REHA 4R7KA 2KTEA 3Q63A 2E3QA 4FPWA 3NMVA 2QIMA 3HXMA 2LE1A 1TXCA 2FFSA 3JRQB 3KB0A 3KLXA 3GTSA 3NMPA 3RT0C 2LDKA 4NCAA 1KCMA 4PSBA 2YH6A 3TVQA 4IGWA 2N4AA 4A85A 3DLBA 4A8VA 2BK0A 2REZA 3NMTA 4IGYA 5JNNA 4QDFB 3NMHA 3FO5A 1T17A 2LAFA 1FSKA 1XDFA 4MNSA 2E3NA 2E3PA 2WQLA 2PCSA 3UJLA 5JO2A 3Q64A 4JHGA 2A1LA 4IH2A 4OICA 2GKDA 4QIPA 1ICXA 2M47A 4IGXA 2LPXA 4QCKA 4Z3LA 4MA6A 4LGAA 2KF2A 5AMWA 2QPVA 4N0GC 4A86A 3GGNA 4JHHA 3JRSA 3KAYA 3QN1A 1EM2A 2LIOA 3KDIA 5BRLA 3TGOC 3NI8A 3CNWA 1UW5A 4REIA 1T27A 4MAPA 2RERA 3KB3A 1XFSA 3PU2A 4M9WA 4N76A 4DSBA 3OTLA 4LGBA 1LN2A 2N4BA 4LG5A 2L9PA 3W9RA 3ZVUA 4C9IA 3KDHA 4N47A 5E4MA 3HO1A 3E85A 1XN5A 2M89A 2ZYLA 4JDAA 2E3RA 4B9RA 1TW0A 4DSCA 1LLTA 3IJTA 4BK7A 3PUTA 2I9YA 3K90A 2MOUA 4A83A 2E3OA 4XRWA 2E3SA 3GL0A 4BTZA 4JDLA 2L65A 2NN5A 2Z9YA 3GOBA 4QDFA 4QDDA 4A88A 4A81A 3OH8A 4IGVA 1JSSA 1LN1A 4REJA 3NJOA 4N3EA 1QMRA 3NQNA 5C9YA 3NEFA 4N41A 3P0LA 1E09A 2LAKA 1B6FA 3P9VA 3H3SA 2EJXA 3K3KA 3OQUA 5JO1A 2K5GA 2VQ5A 3HM9A 3C0VA 4DS8A 1XN6A 4A84A 3RD6A 3HJFA 4IH0A 5E4BA 3HVRA 3OJIA 5I8FA 1X53A 2LF2A 3QSZA 4GY9A 4C94A 3GB4A 3HK2A 2Q3QA 3NJ1A 5E46A 2NS9A 1BTVA 3H3TA 2VNEA 3TFZA 3IE5A 1IFVA 4Q0KA 4BKCA 3KL1A 3P51A 4IHRA 4C9CA 5E4DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3NQN A; 
#chains in the Genus database with same CATH topology
 2L8O A;  4E6F A;  3GKE A;  1XUV A;  2Z9Z A;  3UQH A;  1H2O A;  1ZXF A;  3W9K A;  3H3Q A;  2KCZ A;  3F08 A;  3KDJ A;  4WVO A;  2LUZ A;  3GL2 A;  4A80 A;  3H3R A;  4LA7 A;  3UID A;  4RYV A;  2IL5 A;  3WG8 A;  3NEG A;  4A8G A;  2PSO A;  4BK6 A;  5I9J A;  4JHY A;  3NMN A;  4A87 A;  3NR4 A;  2R55 A;  2LCG A;  4BKD A;  3Q6A A;  1FM4 A;  1LN3 A;  4XRT A;  1VJH A;  3TL1 A;  1Z94 A;  3GTE A;  2K7H A;  4Y31 A;  4M9B A;  2LEQ A;  2D4R A;  3F73 A;  3R6P A;  2KEW A;  3ELI A;  2LGH A;  1BV1 A;  4JHI A;  3NS2 A;  4QDC A;  4A8U A;  3NJ0 A;  2FLH A;  5EKQ C;  3DLH A;  4KPY A;  2E3M A;  3KAZ A;  3RT2 A;  3TVR A;  4NCB A;  2RES A;  4REH A;  4R7K A;  2KTE A;  3Q63 A;  2E3Q A;  4FPW A;  3NMV A;  2QIM A;  3HXM A;  2LE1 A;  1TXC A;  2FFS A;  3JRQ B;  3KB0 A;  3KLX A;  3GTS A;  3NMP A;  3RT0 C;  2LDK A;  4NCA A;  1KCM A;  4PSB A;  2YH6 A;  3TVQ A;  4IGW A;  2N4A A;  4A85 A;  3DLB A;  4A8V A;  2BK0 A;  2REZ A;  3NMT A;  4IGY A;  5JNN A;  4QDF B;  3NMH A;  3FO5 A;  1T17 A;  2LAF A;  1FSK A;  1XDF A;  4MNS A;  2E3N A;  2E3P A;  2WQL A;  2PCS A;  3UJL A;  5JO2 A;  3Q64 A;  4JHG A;  2A1L A;  4IH2 A;  4OIC A;  2GKD A;  4QIP A;  1ICX A;  2M47 A;  4IGX A;  2LPX A;  4QCK A;  4Z3L A;  4MA6 A;  4LGA A;  2KF2 A;  5AMW A;  2QPV A;  4N0G C;  4A86 A;  3GGN A;  4JHH A;  3JRS A;  3KAY A;  3QN1 A;  1EM2 A;  2LIO A;  3KDI A;  5BRL A;  3TGO C;  3NI8 A;  3CNW A;  1UW5 A;  4REI A;  1T27 A;  4MAP A;  2RER A;  3KB3 A;  1XFS A;  3PU2 A;  4M9W A;  4N76 A;  4DSB A;  3OTL A;  4LGB A;  1LN2 A;  2N4B A;  4LG5 A;  2L9P A;  3W9R A;  3ZVU A;  4C9I A;  3KDH A;  4N47 A;  5E4M A;  3HO1 A;  3E85 A;  1XN5 A;  2M89 A;  2ZYL A;  4JDA A;  2E3R A;  4B9R A;  1TW0 A;  4DSC A;  1LLT A;  3IJT A;  4BK7 A;  3PUT A;  2I9Y A;  3K90 A;  2MOU A;  4A83 A;  2E3O A;  4XRW A;  2E3S A;  3GL0 A;  4BTZ A;  4JDL A;  2L65 A;  2NN5 A;  2Z9Y A;  3GOB A;  4QDF A;  4QDD A;  4A88 A;  4A81 A;  3OH8 A;  4IGV A;  1JSS A;  1LN1 A;  4REJ A;  3NJO A;  4N3E A;  1QMR A;  3NQN A;  5C9Y A;  3NEF A;  4N41 A;  3P0L A;  1E09 A;  2LAK A;  1B6F A;  3P9V A;  3H3S A;  2EJX A;  3K3K A;  3OQU A;  5JO1 A;  2K5G A;  2VQ5 A;  3HM9 A;  3C0V A;  4DS8 A;  1XN6 A;  4A84 A;  3RD6 A;  3HJF A;  4IH0 A;  5E4B A;  3HVR A;  3OJI A;  5I8F A;  1X53 A;  2LF2 A;  3QSZ A;  4GY9 A;  4C94 A;  3GB4 A;  3HK2 A;  2Q3Q A;  3NJ1 A;  5E46 A;  2NS9 A;  1BTV A;  3H3T A;  2VNE A;  3TFZ A;  3IE5 A;  1IFV A;  4Q0K A;  4BKC A;  3KL1 A;  3P51 A;  4IHR A;  4C9C A;  5E4D A; 
#chains in the Genus database with same CATH homology
 2L8O A;  4E6F A;  3GKE A;  1XUV A;  2Z9Z A;  3UQH A;  1H2O A;  1ZXF A;  3W9K A;  3H3Q A;  2KCZ A;  3F08 A;  3KDJ A;  4WVO A;  2LUZ A;  3GL2 A;  4A80 A;  3H3R A;  4LA7 A;  3UID A;  4RYV A;  2IL5 A;  3WG8 A;  3NEG A;  4A8G A;  2PSO A;  4BK6 A;  5I9J A;  4JHY A;  3NMN A;  4A87 A;  3NR4 A;  2R55 A;  2LCG A;  4BKD A;  3Q6A A;  1FM4 A;  1LN3 A;  4XRT A;  1VJH A;  3TL1 A;  1Z94 A;  3GTE A;  2K7H A;  4Y31 A;  4M9B A;  2LEQ A;  2D4R A;  3F73 A;  3R6P A;  2KEW A;  3ELI A;  2LGH A;  1BV1 A;  4JHI A;  3NS2 A;  4QDC A;  4A8U A;  3NJ0 A;  2FLH A;  5EKQ C;  3DLH A;  4KPY A;  2E3M A;  3KAZ A;  3RT2 A;  3TVR A;  4NCB A;  2RES A;  4REH A;  4R7K A;  2KTE A;  3Q63 A;  2E3Q A;  4FPW A;  3NMV A;  2QIM A;  3HXM A;  2LE1 A;  1TXC A;  2FFS A;  3JRQ B;  3KB0 A;  3KLX A;  3GTS A;  3NMP A;  3RT0 C;  2LDK A;  4NCA A;  1KCM A;  4PSB A;  2YH6 A;  3TVQ A;  4IGW A;  2N4A A;  4A85 A;  3DLB A;  4A8V A;  2BK0 A;  2REZ A;  3NMT A;  4IGY A;  5JNN A;  4QDF B;  3NMH A;  3FO5 A;  1T17 A;  2LAF A;  1FSK A;  1XDF A;  4MNS A;  2E3N A;  2E3P A;  2WQL A;  2PCS A;  3UJL A;  5JO2 A;  3Q64 A;  4JHG A;  2A1L A;  4IH2 A;  4OIC A;  2GKD A;  4QIP A;  1ICX A;  2M47 A;  4IGX A;  2LPX A;  4QCK A;  4Z3L A;  4MA6 A;  4LGA A;  2KF2 A;  5AMW A;  2QPV A;  4N0G C;  4A86 A;  3GGN A;  4JHH A;  3JRS A;  3KAY A;  3QN1 A;  1EM2 A;  2LIO A;  3KDI A;  5BRL A;  3TGO C;  3NI8 A;  3CNW A;  1UW5 A;  4REI A;  1T27 A;  4MAP A;  2RER A;  3KB3 A;  1XFS A;  3PU2 A;  4M9W A;  4N76 A;  4DSB A;  3OTL A;  4LGB A;  1LN2 A;  2N4B A;  4LG5 A;  2L9P A;  3W9R A;  3ZVU A;  4C9I A;  3KDH A;  4N47 A;  5E4M A;  3HO1 A;  3E85 A;  1XN5 A;  2M89 A;  2ZYL A;  4JDA A;  2E3R A;  4B9R A;  1TW0 A;  4DSC A;  1LLT A;  3IJT A;  4BK7 A;  3PUT A;  2I9Y A;  3K90 A;  2MOU A;  4A83 A;  2E3O A;  4XRW A;  2E3S A;  3GL0 A;  4BTZ A;  4JDL A;  2L65 A;  2NN5 A;  2Z9Y A;  3GOB A;  4QDF A;  4QDD A;  4A88 A;  4A81 A;  3OH8 A;  4IGV A;  1JSS A;  1LN1 A;  4REJ A;  3NJO A;  4N3E A;  1QMR A;  3NQN A;  5C9Y A;  3NEF A;  4N41 A;  3P0L A;  1E09 A;  2LAK A;  1B6F A;  3P9V A;  3H3S A;  2EJX A;  3K3K A;  3OQU A;  5JO1 A;  2K5G A;  2VQ5 A;  3HM9 A;  3C0V A;  4DS8 A;  1XN6 A;  4A84 A;  3RD6 A;  3HJF A;  4IH0 A;  5E4B A;  3HVR A;  3OJI A;  5I8F A;  1X53 A;  2LF2 A;  3QSZ A;  4GY9 A;  4C94 A;  3GB4 A;  3HK2 A;  2Q3Q A;  3NJ1 A;  5E46 A;  2NS9 A;  1BTV A;  3H3T A;  2VNE A;  3TFZ A;  3IE5 A;  1IFV A;  4Q0K A;  4BKC A;  3KL1 A;  3P51 A;  4IHR A;  4C9C A;  5E4D A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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