4A3FC

Rna polymerase ii initial transcribing complex with a 6nt dna-rna hybrid and soaked with ampcpp
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3fC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3fC01
1TWAC 2PA8D 3H3VD 2YU9K 5TMFA 3GTQK 1I3QC 4KN4A 3HOWC 3GTPK 3GTOK 4A3KK 3HOXC 1HQMA 2R92C 3K7AC 4BBRK 5FLMC 4A93C 4BBSC 4A3MK 3I4NK 4BXXK 4LK0A 4A3JK 3S16C 4Y52K 2WAQL 4A3LK 3GTMC 5IYBK 3HOVK 4JK1A 4C2MC 3HKZL 3GTLC 3S15C 1I6HC 1ZYRA 4X6AC 2E2HC 4OIOA 3GTGK 4KMUA 5D4DA 4A3IK 3GTKC 3EQLA 4KN7A 3M3YK 3S1MC 3PO2K 2PPBA 4BY7C 2R93C 3CQZK 1R9TC 5M5WK 3S2HC 5M3MK 5IP7K 3RZOC 2JA7C 5C4JK 4A3BC 1K83K 2WB1L 4A3FC 4A3EC 3S14C 3S1RC 3GTMK 5FJ8K 2R7ZK 3HOYK 5IYCC 1XPPA 4QIWL 2B63K 3S2DC 4QJVB 3HOUK 4YFXA 3HOZK 4OIPA 4AYBL 2JA5K 3PO3K 2NVTK 1WCMC 2JA6C 4A3DK 1TWCK 4C3IK 3M4OC 5C44K 3HKZD 2E2IC 2NVYK 3RZDK 5IP9K 3S1NC 4XLNA 3S17C 1Y1VC 5M5YK 3I4MK 2E2JK 3H0GK 4LLGA 3S1QC 4Y7NK 1TWAK 5C3EC 3HOXK 2VUMC 2NVQC 1I3QK 3HOWK 1I50C 2WB1D 2NVXC 1SFOC 1TWFC 4G7OA 3GTJC 4C3JC 3K7AK 1IW7A 2O5JA 5FLMK 4QJVA 2R92K 4A93K 4BBSK 4QIWD 4MEXA 3S16K 1Y1WC 5C4XC 4XSXA 1TWGC 5TMCA 1BDFA 4BY1C 4OIQA 4XSZA 2JA8C 4Q4ZA 4YG2A 4AYBD 4C2MK 4Q5SA 3GTLK 4G7HA 3FKIC 3S15K 1I6HK 4X6AK 2E2HK 1I6VA 1YNNA 4A3GC 5IYDC 4C3HC 3GTKK 2WAQD 2O5IA 3S1MK 4BY7K 2R93K 1R9TK 2A6HA 2A69A 4OIRA 3S2HK 3RZOK 2JA7K 2A6EA 2YU9C 4LK1A 4A3BK 3GTQC 4A3FK 5C4XK 4A3EK 3S14K 3S1RK 3GTOC 4G7ZA 4A3KC 3GTPC 4OINA 1TWHC 5IYCK 4BBRC 2PMZL 3I4NC 3S2DK 4A3MC 4BXXC 4A3JC 4GZYA 2BE5A 3HOVC 5IYBC 4LJZA 4A3LC 1YNJA 4MEYA 1WCMK 2JA6K 3M4OK 2E2IK 3GTGC 3DXJA 4A3IC 2Y0SL 3S1NK 3S17K 1Y1VK 3M3YC 4NOIA 3PO2C 3S1QK 1TWHK 3CQZC 2PA8L 3H3VL 5M5XK 5IP7C 5C4JC 1K83C 5C3EK 2VUMK 2NVQK 3WODA 5M3FK 4A3CC 1SMYA 2R7ZC 3HOYC 1I50K 4YFKA 2NVXK 1SFOK 1TWFK 3GTJK 4C3JK 4MQ9A 2B63C 3HOUC 4YFNA 2CW0A 2PMZD 3HOZC 1Y1WK 1TWGK 2JA5C 3PO3C 4BY1K 2JA8K 4XLPA 2NVTC 4A3DC 1TWCC 3FKIK 4C3IC 5C44C 4Y52C 2NVYC 4ZH4A 3RZDC 4A3GK 2A68A 5IP9C 5IYDK 4C3HK 3I4MC 4A3CK 2E2JC 3H0GC 2Y0SD 4Y7NC
chains in the Genus database with same CATH superfamily
2ZJPS 5TMFA 1USMA 1EFWA 3GDZA 4BXXK 2GSNA 5JFEA 3L4KA 3HOVK 1WORA 5DM7S 5L46A 4KMAA 3HKZL 1I6HC 1ZYRA 4KB4A 2E2HC 3GEEA 4KMUA 4LR2A 3EQLA 3S1MC 1WOSA 1R9TC 3BP3A 4IOAS 1K83K 3GTMK 3HOYK 1XPPA 5IOTA 1F93A 3S2DC 4QJVB 1Y1VA 5HQHA 3LYWA 3Q3QA 4GTFA 3HOZK 3GTOA 4OIPA 4KARA 2JA5K 3N3YA 3PO3K 4GFQA 2JA6C 4AH6A 4C3IK 2ZUEA 3M4OC 4XCHA 3RZDK 3S0XA 1WSVA 1WQGA 5M5YK 3L4JA 3I4MK 3S1QC 3GTGA 3IPJA 1VH2A 1TWAK 2NVQC 2Y3PA 3HOWK 2WB1D 4WCES 5EGHA 3GEIA 3BUEA 3N0CA 4MEXA 5C4XC 4KM9A 2KWAA 3A8JA 1XZPA 4Q4ZA 4C2MK 3AD7C 5E68A 1VJEA 2EBBA 3S15K 4WF9S 3GTQA 4X6AK 1I6VA 3GTKK 1TWCA 4KAWX 1XZPB 5HL8A 4ILDA 2FQTA 3S2HK 3RZOK 4A3EK 4WFBS 4G7ZA 4A3KC 3GTOC 3GTPC 3LAJA 4A3MC 3TFHA 5IYBC 1DD5A 1F7UA 2XCRB 1JVIA 3GTGC 1O2FB 3GTLA 3CAGA 4NOIA 4FZBA 1C0AA 1ZXOA 1EI6A 2W7VA 5C3EK 2D6FC 5IOSA 2VUMK 4IO9S 4WFNS 2NVXK 4YFKA 3NUHA 2JA7A 1EQRA 1TWGK 1O26A 2GAHC 2NVTC 4A3DC 1TWCC 3G4AA 5C44C 3TFJA 1VRQC 4A3GK 3FOEA 2E2IA 2PA8D 3H3VD 2YU9K 3N0BA 1XXCA 3V4GA 4KN4A 3LPXA 2E2HA 1HQMA 2R92C 3K7AC 5FLMC 4A93C 2FQOA 3I4NK 3S16C 4Y52K 4BKWA 1ZQ1C 3T02A 2L5NA 3GTLC 3GIRA 1ISEA 4A3IK 3FKIA 4G0UA 4PABA 3PO2K 3CQZK 5M5WK 1O27A 5IP7K 5C4JK 2JA7C 5IOQA 4A3BC 2WB1L 1PJ7A 3S14C 3GEHA 2RGRA 5IYCC 2B63K 3HOUK 4YFXA 3OREA 1V5VA 4BLAA 3OEPA 2V6SA 1O2AA 2E2IC 5IP9K 3S1NC 1O28A 3H0GK 4WFAS 3DLLS 4WJ4A 1I3QK 3HOXK 4G7OA 3GTJC 4C3JC 2V6TA 1K83A 4BBSK 4QJVA 4GTCA 1B4AA 1WQFA 1PJ6A 1BDFA 4BLBA 4GT9A 3FKIC 3GTPA 4GTLA 4GTDA 1EK8A 4BY7K 2R93K 4RMFA 2A69A 4LK1A 4A3FK 5C4XK 3S1RK 2L3UA 4OINA 5JVOA 1TWAA 1J6XA 4BXXC 3HOVC 5IORA 4LJZA 2ZUFA 1YNJA 4GTEA 1WCMK 5TJ3A 1G51A 4GTAA 4DDQA 3S17K 1Y1VK 2PA8L 3H3VL 3ADAC 3GTKA 1XXBA 4M1XA 1K83C 1SMYA 3HOYC 1I50K 1SFOK 1TWFK 3HOZC 2PMZD 2KQ1A 1Y1WK 2JA5C 3PO3C 1XZQA 4BY1K 4XLPA 3SZZA 2JA8K 1F7VA 1WIHA 4C3IC 1O24A 4KMHA 3RZDC 5IYDK 2PHCB 1XZQB 4C3HK 2R92A 3I4MC 2CFAA 5DM6S 2Y0SD 1GE9A 1TWAC 1BGWA 3GTQK 4GTBA 3HOWC 1ZBSA 2CFAB 3AH5A 3PIPS 4BBRK 2VUMA 4LQYA 4A3JK 1USOA 3GSIA 4A3LK 3A8KA 1DCHA 4JK1A 4C2MC 1BJTA 3FHZA 3S15C 4X6AC 3GTKC 1DCPA 3M3YK 3FOFA 4KMDA 2P8TA 3S2HC 3RZOC 1YX2A 4IOCS 4A3EC 2GAGC 1O29A 2R7ZK 2YU9A 1IQ0A 1IS1A 1TWHA 3T00A 2NVYK 4XLNA 3GTJA 1KQ4A 5CHPA 2E2JK 4LLGA 4Y7NK 4FM9A 1YCLA 5C3EC 2VUMC 5CJ9A 1VGXA 3CQZA 3QX3A 2NVXC 4KASA 4C45A 1IW7A 2O5JA 3AD9C 4QIWD 4XSXA 1TWGC 3PIOS 4OIQA 2RH6A 4WJ3M 2B63A 4AYBD 2ZFZA 3G4CA 4Q5SA 1I6HK 2E2HK 2ZJRS 1YNNA 3CF5S 4A3GC 3S1MK 1R9TK 5HL7S 2YU9C 3H0GA 4KDDA 3JSTA 1TWHC 2PMZL 1AB4A 3I4NC 3AD8C 4G0WA 3S2DK 1INNA 3T01A 4MEYA 1IL2A 3BP8C 2JA6K 3M4OK 3GTMA 1PJ5A 4A3IC 2Y0SL 1JQWA 4WILA 3TFIA 3PO2C 3S1QK 3CQZC 4LOWA 5IP7C 5C4JC 2JA5A 3A8IA 2NVQK 1VLOA 5M3FK 4A3CC 2R93A 2B63C 2ZJQS 3HOUC 1IE0A 1F9NA 4P9SA 3MMLB 2JH3A 4PAAA 3AQPA 5IP9C 1WCMA 1X31C 3H0GC 4U67S 1RU0A 1I3QC 3GTPK 3GTOK 4A3KK 5JVHS 3HOXC 4BBSC 4A3MK 5EGEA 4LK0A 1I50A 2WAQL 3GTMC 1TWFA 5IYBK 1SFOA 1O25A 1Y1WA 5JVGS 4OIOA 3GTGK 5D4DA 4KN7A 3ERED 2PPBA 4BY7C 2R93C 5M3MK 4A3FC 1DCOA 3S1RC 5FJ8K 4QIWL 1BS2A 1L0WA 4AYBL 1HI9A 2NVTK 1WCMC 4A3DK 1TWCK 5C44K 3HKZD 2NVXA 3S17C 1Y1VC 4O2DA 1B4BA 1TWGA 1ZVUA 2GSOA 1J6WA 4KC6A 1XXAA 1I50C 2P5MA 1SFOC 1TWFC 2R92K 1WOPA 3K7AK 1IBAA 5FLMK 4A93K 3S16K 2R7ZA 1Y1WC 5TMCA 4BY1C 4XSZA 2JA8C 2KXYA 4YG2A 3GTLK 4G7HA 5IYDC 4C3HC 1EH1A 2WAQD 2O5IA 2NVYA 2A6HA 4P5BA 4OIRA 2XCOA 3VA7A 2JA7K 2A6EA 4A3BK 3GTQC 3S14K 3OPFA 5IYCK 4BBRC 1WOOA 4KM8A 4A3JC 4GZYA 1FEUA 4G0VA 2BE5A 4A3LC 3TTGA 3SZYA 2E2IK 2KPUA 3DXJA 3S1NK 1UV7A 3M3YC 3LAPA 1TWHK 4J3NA 5M5XK 4KB2A 1JOEA 3WODA 2R7ZC 3AQOA 1R9TA 3GTJK 4C3JK 4MQ9A 4P5AA 1WQHA 4YFNA 2CW0A 2XCQA 1J6VA 2GSUA 3FKIK 1I3QA 3HXAA 4Y52C 4KATA 2NVYC 4ZH4A 1O2BA 2A68A 2JA6A 1WSRA 1J98A 4A3CK 2E2JC 2V6UA 4Y7NC
chains in the Genus database with same CATH topology
1TWAC 2PA8D 3H3VD 2YU9K 5TMFA 3GTQK 1I3QC 4KN4A 3HOWC 3GTPK 3GTOK 4A3KK 3HOXC 1HQMA 2R92C 3K7AC 4BBRK 5FLMC 4A93C 4BBSC 4A3MK 3I4NK 4BXXK 4LK0A 4A3JK 3S16C 4Y52K 2WAQL 4A3LK 3GTMC 5IYBK 3HOVK 4JK1A 4C2MC 3HKZL 3GTLC 3S15C 1I6HC 1ZYRA 4X6AC 2E2HC 4OIOA 3GTGK 4KMUA 5D4DA 4A3IK 3GTKC 3EQLA 4KN7A 3M3YK 3S1MC 3PO2K 2PPBA 4BY7C 2R93C 3CQZK 1R9TC 5M5WK 3S2HC 5M3MK 5IP7K 3RZOC 2JA7C 5C4JK 4A3BC 1K83K 2WB1L 4A3FC 4A3EC 3S14C 3S1RC 3GTMK 5FJ8K 2R7ZK 3HOYK 5IYCC 1XPPA 4QIWL 2B63K 3S2DC 4QJVB 3HOUK 4YFXA 3HOZK 4OIPA 4AYBL 2JA5K 3PO3K 2NVTK 1WCMC 2JA6C 4A3DK 1TWCK 4C3IK 3M4OC 5C44K 3HKZD 2E2IC 2NVYK 3RZDK 5IP9K 3S1NC 4XLNA 3S17C 1Y1VC 5M5YK 3I4MK 2E2JK 3H0GK 4LLGA 3S1QC 4Y7NK 1TWAK 5C3EC 3HOXK 2VUMC 2NVQC 1I3QK 3HOWK 1I50C 2WB1D 2NVXC 1SFOC 1TWFC 4G7OA 3GTJC 4C3JC 3K7AK 1IW7A 2O5JA 5FLMK 4QJVA 2R92K 4A93K 4BBSK 4QIWD 4MEXA 3S16K 1Y1WC 5C4XC 4XSXA 1TWGC 5TMCA 1BDFA 4BY1C 4OIQA 4XSZA 2JA8C 4Q4ZA 4YG2A 4AYBD 4C2MK 4Q5SA 3GTLK 4G7HA 3FKIC 3S15K 1I6HK 4X6AK 2E2HK 1I6VA 1YNNA 4A3GC 5IYDC 4C3HC 3GTKK 2WAQD 2O5IA 3S1MK 4BY7K 2R93K 1R9TK 2A6HA 2A69A 4OIRA 3S2HK 3RZOK 2JA7K 2A6EA 2YU9C 4LK1A 4A3BK 3GTQC 4A3FK 5C4XK 4A3EK 3S14K 3S1RK 3GTOC 4G7ZA 4A3KC 3GTPC 4OINA 1TWHC 5IYCK 4BBRC 2PMZL 3I4NC 3S2DK 4A3MC 4BXXC 4A3JC 4GZYA 2BE5A 3HOVC 5IYBC 4LJZA 4A3LC 1YNJA 4MEYA 1WCMK 2JA6K 3M4OK 2E2IK 3GTGC 3DXJA 4A3IC 2Y0SL 3S1NK 3S17K 1Y1VK 3M3YC 4NOIA 3PO2C 3S1QK 1TWHK 3CQZC 2PA8L 3H3VL 5M5XK 5IP7C 5C4JC 1K83C 5C3EK 2VUMK 2NVQK 3WODA 5M3FK 4A3CC 1SMYA 2R7ZC 3HOYC 1I50K 4YFKA 2NVXK 1SFOK 1TWFK 3GTJK 4C3JK 4MQ9A 2B63C 3HOUC 4YFNA 2CW0A 2PMZD 3HOZC 1Y1WK 1TWGK 2JA5C 3PO3C 4BY1K 2JA8K 4XLPA 2NVTC 4A3DC 1TWCC 3FKIK 4C3IC 5C44C 4Y52C 2NVYC 4ZH4A 3RZDC 4A3GK 2A68A 5IP9C 5IYDK 4C3HK 3I4MC 4A3CK 2E2JC 3H0GC 2Y0SD 4Y7NC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWA C;  2PA8 D;  3H3V D;  2YU9 K;  5TMF A;  3GTQ K;  1I3Q C;  4KN4 A;  3HOW C;  3GTP K;  3GTO K;  4A3K K;  3HOX C;  1HQM A;  2R92 C;  3K7A C;  4BBR K;  5FLM C;  4A93 C;  4BBS C;  4A3M K;  3I4N K;  4BXX K;  4LK0 A;  4A3J K;  3S16 C;  4Y52 K;  2WAQ L;  4A3L K;  3GTM C;  5IYB K;  3HOV K;  4JK1 A;  4C2M C;  3HKZ L;  3GTL C;  3S15 C;  1I6H C;  1ZYR A;  4X6A C;  2E2H C;  4OIO A;  3GTG K;  4KMU A;  5D4D A;  4A3I K;  3GTK C;  3EQL A;  4KN7 A;  3M3Y K;  3S1M C;  3PO2 K;  2PPB A;  4BY7 C;  2R93 C;  3CQZ K;  1R9T C;  5M5W K;  3S2H C;  5M3M K;  5IP7 K;  3RZO C;  2JA7 C;  5C4J K;  4A3B C;  1K83 K;  2WB1 L;  4A3F C;  4A3E C;  3S14 C;  3S1R C;  3GTM K;  5FJ8 K;  2R7Z K;  3HOY K;  5IYC C;  1XPP A;  4QIW L;  2B63 K;  3S2D C;  4QJV B;  3HOU K;  4YFX A;  3HOZ K;  4OIP A;  4AYB L;  2JA5 K;  3PO3 K;  2NVT K;  1WCM C;  2JA6 C;  4A3D K;  1TWC K;  4C3I K;  3M4O C;  5C44 K;  3HKZ D;  2E2I C;  2NVY K;  3RZD K;  5IP9 K;  3S1N C;  4XLN A;  3S17 C;  1Y1V C;  5M5Y K;  3I4M K;  2E2J K;  3H0G K;  4LLG A;  3S1Q C;  4Y7N K;  1TWA K;  5C3E C;  3HOX K;  2VUM C;  2NVQ C;  1I3Q K;  3HOW K;  1I50 C;  2WB1 D;  2NVX C;  1SFO C;  1TWF C;  4G7O A;  3GTJ C;  4C3J C;  3K7A K;  1IW7 A;  2O5J A;  5FLM K;  4QJV A;  2R92 K;  4A93 K;  4BBS K;  4QIW D;  4MEX A;  3S16 K;  1Y1W C;  5C4X C;  4XSX A;  1TWG C;  5TMC A;  1BDF A;  4BY1 C;  4OIQ A;  4XSZ A;  2JA8 C;  4Q4Z A;  4YG2 A;  4AYB D;  4C2M K;  4Q5S A;  3GTL K;  4G7H A;  3FKI C;  3S15 K;  1I6H K;  4X6A K;  2E2H K;  1I6V A;  1YNN A;  4A3G C;  5IYD C;  4C3H C;  3GTK K;  2WAQ D;  2O5I A;  3S1M K;  4BY7 K;  2R93 K;  1R9T K;  2A6H A;  2A69 A;  4OIR A;  3S2H K;  3RZO K;  2JA7 K;  2A6E A;  2YU9 C;  4LK1 A;  4A3B K;  3GTQ C;  4A3F K;  5C4X K;  4A3E K;  3S14 K;  3S1R K;  3GTO C;  4G7Z A;  4A3K C;  3GTP C;  4OIN A;  1TWH C;  5IYC K;  4BBR C;  2PMZ L;  3I4N C;  3S2D K;  4A3M C;  4BXX C;  4A3J C;  4GZY A;  2BE5 A;  3HOV C;  5IYB C;  4LJZ A;  4A3L C;  1YNJ A;  4MEY A;  1WCM K;  2JA6 K;  3M4O K;  2E2I K;  3GTG C;  3DXJ A;  4A3I C;  2Y0S L;  3S1N K;  3S17 K;  1Y1V K;  3M3Y C;  4NOI A;  3PO2 C;  3S1Q K;  1TWH K;  3CQZ C;  2PA8 L;  3H3V L;  5M5X K;  5IP7 C;  5C4J C;  1K83 C;  5C3E K;  2VUM K;  2NVQ K;  3WOD A;  5M3F K;  4A3C C;  1SMY A;  2R7Z C;  3HOY C;  1I50 K;  4YFK A;  2NVX K;  1SFO K;  1TWF K;  3GTJ K;  4C3J K;  4MQ9 A;  2B63 C;  3HOU C;  4YFN A;  2CW0 A;  2PMZ D;  3HOZ C;  1Y1W K;  1TWG K;  2JA5 C;  3PO3 C;  4BY1 K;  2JA8 K;  4XLP A;  2NVT C;  4A3D C;  1TWC C;  3FKI K;  4C3I C;  5C44 C;  4Y52 C;  2NVY C;  4ZH4 A;  3RZD C;  4A3G K;  2A68 A;  5IP9 C;  5IYD K;  4C3H K;  3I4M C;  4A3C K;  2E2J C;  3H0G C;  2Y0S D;  4Y7N C; 
#chains in the Genus database with same CATH topology
 2ZJP S;  5TMF A;  1USM A;  1EFW A;  3GDZ A;  4BXX K;  2GSN A;  5JFE A;  3L4K A;  3HOV K;  1WOR A;  5DM7 S;  5L46 A;  4KMA A;  3HKZ L;  1I6H C;  1ZYR A;  4KB4 A;  2E2H C;  3GEE A;  4KMU A;  4LR2 A;  3EQL A;  3S1M C;  1WOS A;  1R9T C;  3BP3 A;  4IOA S;  1K83 K;  3GTM K;  3HOY K;  1XPP A;  5IOT A;  1F93 A;  3S2D C;  4QJV B;  1Y1V A;  5HQH A;  3LYW A;  3Q3Q A;  4GTF A;  3HOZ K;  3GTO A;  4OIP A;  4KAR A;  2JA5 K;  3N3Y A;  3PO3 K;  4GFQ A;  2JA6 C;  4AH6 A;  4C3I K;  2ZUE A;  3M4O C;  4XCH A;  3RZD K;  3S0X A;  1WSV A;  1WQG A;  5M5Y K;  3L4J A;  3I4M K;  3S1Q C;  3GTG A;  3IPJ A;  1VH2 A;  1TWA K;  2NVQ C;  2Y3P A;  3HOW K;  2WB1 D;  4WCE S;  5EGH A;  3GEI A;  3BUE A;  3N0C A;  4MEX A;  5C4X C;  4KM9 A;  2KWA A;  3A8J A;  1XZP A;  4Q4Z A;  4C2M K;  3AD7 C;  5E68 A;  1VJE A;  2EBB A;  3S15 K;  4WF9 S;  3GTQ A;  4X6A K;  1I6V A;  3GTK K;  1TWC A;  4KAW X;  1XZP B;  5HL8 A;  4ILD A;  2FQT A;  3S2H K;  3RZO K;  4A3E K;  4WFB S;  4G7Z A;  4A3K C;  3GTO C;  3GTP C;  3LAJ A;  4A3M C;  3TFH A;  5IYB C;  1DD5 A;  1F7U A;  2XCR B;  1JVI A;  3GTG C;  1O2F B;  3GTL A;  3CAG A;  4NOI A;  4FZB A;  1C0A A;  1ZXO A;  1EI6 A;  2W7V A;  5C3E K;  2D6F C;  5IOS A;  2VUM K;  4IO9 S;  4WFN S;  2NVX K;  4YFK A;  3NUH A;  2JA7 A;  1EQR A;  1TWG K;  1O26 A;  2GAH C;  2NVT C;  4A3D C;  1TWC C;  3G4A A;  5C44 C;  3TFJ A;  1VRQ C;  4A3G K;  3FOE A;  2E2I A;  2PA8 D;  3H3V D;  2YU9 K;  3N0B A;  1XXC A;  3V4G A;  4KN4 A;  3LPX A;  2E2H A;  1HQM A;  2R92 C;  3K7A C;  5FLM C;  4A93 C;  2FQO A;  3I4N K;  3S16 C;  4Y52 K;  4BKW A;  1ZQ1 C;  3T02 A;  2L5N A;  3GTL C;  3GIR A;  1ISE A;  4A3I K;  3FKI A;  4G0U A;  4PAB A;  3PO2 K;  3CQZ K;  5M5W K;  1O27 A;  5IP7 K;  5C4J K;  2JA7 C;  5IOQ A;  4A3B C;  2WB1 L;  1PJ7 A;  3S14 C;  3GEH A;  2RGR A;  5IYC C;  2B63 K;  3HOU K;  4YFX A;  3ORE A;  1V5V A;  4BLA A;  3OEP A;  2V6S A;  1O2A A;  2E2I C;  5IP9 K;  3S1N C;  1O28 A;  3H0G K;  4WFA S;  3DLL S;  4WJ4 A;  1I3Q K;  3HOX K;  4G7O A;  3GTJ C;  4C3J C;  2V6T A;  1K83 A;  4BBS K;  4QJV A;  4GTC A;  1B4A A;  1WQF A;  1PJ6 A;  1BDF A;  4BLB A;  4GT9 A;  3FKI C;  3GTP A;  4GTL A;  4GTD A;  1EK8 A;  4BY7 K;  2R93 K;  4RMF A;  2A69 A;  4LK1 A;  4A3F K;  5C4X K;  3S1R K;  2L3U A;  4OIN A;  5JVO A;  1TWA A;  1J6X A;  4BXX C;  3HOV C;  5IOR A;  4LJZ A;  2ZUF A;  1YNJ A;  4GTE A;  1WCM K;  5TJ3 A;  1G51 A;  4GTA A;  4DDQ A;  3S17 K;  1Y1V K;  2PA8 L;  3H3V L;  3ADA C;  3GTK A;  1XXB A;  4M1X A;  1K83 C;  1SMY A;  3HOY C;  1I50 K;  1SFO K;  1TWF K;  3HOZ C;  2PMZ D;  2KQ1 A;  1Y1W K;  2JA5 C;  3PO3 C;  1XZQ A;  4BY1 K;  4XLP A;  3SZZ A;  2JA8 K;  1F7V A;  1WIH A;  4C3I C;  1O24 A;  4KMH A;  3RZD C;  5IYD K;  2PHC B;  1XZQ B;  4C3H K;  2R92 A;  3I4M C;  2CFA A;  5DM6 S;  2Y0S D;  1GE9 A;  1TWA C;  1BGW A;  3GTQ K;  4GTB A;  3HOW C;  1ZBS A;  2CFA B;  3AH5 A;  3PIP S;  4BBR K;  2VUM A;  4LQY A;  4A3J K;  1USO A;  3GSI A;  4A3L K;  3A8K A;  1DCH A;  4JK1 A;  4C2M C;  1BJT A;  3FHZ A;  3S15 C;  4X6A C;  3GTK C;  1DCP A;  3M3Y K;  3FOF A;  4KMD A;  2P8T A;  3S2H C;  3RZO C;  1YX2 A;  4IOC S;  4A3E C;  2GAG C;  1O29 A;  2R7Z K;  2YU9 A;  1IQ0 A;  1IS1 A;  1TWH A;  3T00 A;  2NVY K;  4XLN A;  3GTJ A;  1KQ4 A;  5CHP A;  2E2J K;  4LLG A;  4Y7N K;  4FM9 A;  1YCL A;  5C3E C;  2VUM C;  5CJ9 A;  1VGX A;  3CQZ A;  3QX3 A;  2NVX C;  4KAS A;  4C45 A;  1IW7 A;  2O5J A;  3AD9 C;  4QIW D;  4XSX A;  1TWG C;  3PIO S;  4OIQ A;  2RH6 A;  4WJ3 M;  2B63 A;  4AYB D;  2ZFZ A;  3G4C A;  4Q5S A;  1I6H K;  2E2H K;  2ZJR S;  1YNN A;  3CF5 S;  4A3G C;  3S1M K;  1R9T K;  5HL7 S;  2YU9 C;  3H0G A;  4KDD A;  3JST A;  1TWH C;  2PMZ L;  1AB4 A;  3I4N C;  3AD8 C;  4G0W A;  3S2D K;  1INN A;  3T01 A;  4MEY A;  1IL2 A;  3BP8 C;  2JA6 K;  3M4O K;  3GTM A;  1PJ5 A;  4A3I C;  2Y0S L;  1JQW A;  4WIL A;  3TFI A;  3PO2 C;  3S1Q K;  3CQZ C;  4LOW A;  5IP7 C;  5C4J C;  2JA5 A;  3A8I A;  2NVQ K;  1VLO A;  5M3F K;  4A3C C;  2R93 A;  2B63 C;  2ZJQ S;  3HOU C;  1IE0 A;  1F9N A;  4P9S A;  3MML B;  2JH3 A;  4PAA A;  3AQP A;  5IP9 C;  1WCM A;  1X31 C;  3H0G C;  4U67 S;  1RU0 A;  1I3Q C;  3GTP K;  3GTO K;  4A3K K;  5JVH S;  3HOX C;  4BBS C;  4A3M K;  5EGE A;  4LK0 A;  1I50 A;  2WAQ L;  3GTM C;  1TWF A;  5IYB K;  1SFO A;  1O25 A;  1Y1W A;  5JVG S;  4OIO A;  3GTG K;  5D4D A;  4KN7 A;  3ERE D;  2PPB A;  4BY7 C;  2R93 C;  5M3M K;  4A3F C;  1DCO A;  3S1R C;  5FJ8 K;  4QIW L;  1BS2 A;  1L0W A;  4AYB L;  1HI9 A;  2NVT K;  1WCM C;  4A3D K;  1TWC K;  5C44 K;  3HKZ D;  2NVX A;  3S17 C;  1Y1V C;  4O2D A;  1B4B A;  1TWG A;  1ZVU A;  2GSO A;  1J6W A;  4KC6 A;  1XXA A;  1I50 C;  2P5M A;  1SFO C;  1TWF C;  2R92 K;  1WOP A;  3K7A K;  1IBA A;  5FLM K;  4A93 K;  3S16 K;  2R7Z A;  1Y1W C;  5TMC A;  4BY1 C;  4XSZ A;  2JA8 C;  2KXY A;  4YG2 A;  3GTL K;  4G7H A;  5IYD C;  4C3H C;  1EH1 A;  2WAQ D;  2O5I A;  2NVY A;  2A6H A;  4P5B A;  4OIR A;  2XCO A;  3VA7 A;  2JA7 K;  2A6E A;  4A3B K;  3GTQ C;  3S14 K;  3OPF A;  5IYC K;  4BBR C;  1WOO A;  4KM8 A;  4A3J C;  4GZY A;  1FEU A;  4G0V A;  2BE5 A;  4A3L C;  3TTG A;  3SZY A;  2E2I K;  2KPU A;  3DXJ A;  3S1N K;  1UV7 A;  3M3Y C;  3LAP A;  1TWH K;  4J3N A;  5M5X K;  4KB2 A;  1JOE A;  3WOD A;  2R7Z C;  3AQO A;  1R9T A;  3GTJ K;  4C3J K;  4MQ9 A;  4P5A A;  1WQH A;  4YFN A;  2CW0 A;  2XCQ A;  1J6V A;  2GSU A;  3FKI K;  1I3Q A;  3HXA A;  4Y52 C;  4KAT A;  2NVY C;  4ZH4 A;  1O2B A;  2A68 A;  2JA6 A;  1WSR A;  1J98 A;  4A3C K;  2E2J C;  2V6U A;  4Y7N C; 
#chains in the Genus database with same CATH homology
 1TWA C;  2PA8 D;  3H3V D;  2YU9 K;  5TMF A;  3GTQ K;  1I3Q C;  4KN4 A;  3HOW C;  3GTP K;  3GTO K;  4A3K K;  3HOX C;  1HQM A;  2R92 C;  3K7A C;  4BBR K;  5FLM C;  4A93 C;  4BBS C;  4A3M K;  3I4N K;  4BXX K;  4LK0 A;  4A3J K;  3S16 C;  4Y52 K;  2WAQ L;  4A3L K;  3GTM C;  5IYB K;  3HOV K;  4JK1 A;  4C2M C;  3HKZ L;  3GTL C;  3S15 C;  1I6H C;  1ZYR A;  4X6A C;  2E2H C;  4OIO A;  3GTG K;  4KMU A;  5D4D A;  4A3I K;  3GTK C;  3EQL A;  4KN7 A;  3M3Y K;  3S1M C;  3PO2 K;  2PPB A;  4BY7 C;  2R93 C;  3CQZ K;  1R9T C;  5M5W K;  3S2H C;  5M3M K;  5IP7 K;  3RZO C;  2JA7 C;  5C4J K;  4A3B C;  1K83 K;  2WB1 L;  4A3F C;  4A3E C;  3S14 C;  3S1R C;  3GTM K;  5FJ8 K;  2R7Z K;  3HOY K;  5IYC C;  1XPP A;  4QIW L;  2B63 K;  3S2D C;  4QJV B;  3HOU K;  4YFX A;  3HOZ K;  4OIP A;  4AYB L;  2JA5 K;  3PO3 K;  2NVT K;  1WCM C;  2JA6 C;  4A3D K;  1TWC K;  4C3I K;  3M4O C;  5C44 K;  3HKZ D;  2E2I C;  2NVY K;  3RZD K;  5IP9 K;  3S1N C;  4XLN A;  3S17 C;  1Y1V C;  5M5Y K;  3I4M K;  2E2J K;  3H0G K;  4LLG A;  3S1Q C;  4Y7N K;  1TWA K;  5C3E C;  3HOX K;  2VUM C;  2NVQ C;  1I3Q K;  3HOW K;  1I50 C;  2WB1 D;  2NVX C;  1SFO C;  1TWF C;  4G7O A;  3GTJ C;  4C3J C;  3K7A K;  1IW7 A;  2O5J A;  5FLM K;  4QJV A;  2R92 K;  4A93 K;  4BBS K;  4QIW D;  4MEX A;  3S16 K;  1Y1W C;  5C4X C;  4XSX A;  1TWG C;  5TMC A;  1BDF A;  4BY1 C;  4OIQ A;  4XSZ A;  2JA8 C;  4Q4Z A;  4YG2 A;  4AYB D;  4C2M K;  4Q5S A;  3GTL K;  4G7H A;  3FKI C;  3S15 K;  1I6H K;  4X6A K;  2E2H K;  1I6V A;  1YNN A;  4A3G C;  5IYD C;  4C3H C;  3GTK K;  2WAQ D;  2O5I A;  3S1M K;  4BY7 K;  2R93 K;  1R9T K;  2A6H A;  2A69 A;  4OIR A;  3S2H K;  3RZO K;  2JA7 K;  2A6E A;  2YU9 C;  4LK1 A;  4A3B K;  3GTQ C;  4A3F K;  5C4X K;  4A3E K;  3S14 K;  3S1R K;  3GTO C;  4G7Z A;  4A3K C;  3GTP C;  4OIN A;  1TWH C;  5IYC K;  4BBR C;  2PMZ L;  3I4N C;  3S2D K;  4A3M C;  4BXX C;  4A3J C;  4GZY A;  2BE5 A;  3HOV C;  5IYB C;  4LJZ A;  4A3L C;  1YNJ A;  4MEY A;  1WCM K;  2JA6 K;  3M4O K;  2E2I K;  3GTG C;  3DXJ A;  4A3I C;  2Y0S L;  3S1N K;  3S17 K;  1Y1V K;  3M3Y C;  4NOI A;  3PO2 C;  3S1Q K;  1TWH K;  3CQZ C;  2PA8 L;  3H3V L;  5M5X K;  5IP7 C;  5C4J C;  1K83 C;  5C3E K;  2VUM K;  2NVQ K;  3WOD A;  5M3F K;  4A3C C;  1SMY A;  2R7Z C;  3HOY C;  1I50 K;  4YFK A;  2NVX K;  1SFO K;  1TWF K;  3GTJ K;  4C3J K;  4MQ9 A;  2B63 C;  3HOU C;  4YFN A;  2CW0 A;  2PMZ D;  3HOZ C;  1Y1W K;  1TWG K;  2JA5 C;  3PO3 C;  4BY1 K;  2JA8 K;  4XLP A;  2NVT C;  4A3D C;  1TWC C;  3FKI K;  4C3I C;  5C44 C;  4Y52 C;  2NVY C;  4ZH4 A;  3RZD C;  4A3G K;  2A68 A;  5IP9 C;  5IYD K;  4C3H K;  3I4M C;  4A3C K;  2E2J C;  3H0G C;  2Y0S D;  4Y7N C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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