4BB2A

Crystal structure of cleaved corticosteroid-binding globulin in complex with progesterone
Total Genus 98
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
98
sequence length
337
structure length
332
Chain Sequence
HHRGLASANVDFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNLTERSETEIHQGFQHLHQLFALEMTMGNALFLDGSLELLESFSADIAHYYESEVLAMNFQDWATASRQINSYVKNKTQGKIVDLFSGLDSPAILVLVNYIFFKGTWTQPFDLASTREENFYVDETTVVKVPMMLQSSTISYLHDSELPCQLVQMNYVGNGTVFFILPDKGKMNTVIAALSRDTINRWSAGLTSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTNQANFSRITQDAQLKSSKVVHKAVLQLNEEGVDTAGSTGVTLNLT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords CORTICOSTEROID-BINDING GLOBULIN
publication title Corticosteroid-Binding Globulin: Structure-Function Implications from Species Differences
pubmed doi rcsb
source organism Homo sapiens
total genus 98
structure length 332
sequence length 337
ec nomenclature
pdb deposition date 2012-09-19
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.39.10 Mainly Beta Roll Alpha-1-antitrypsin; domain 1 Alpha-1-antitrypsin, domain 1 4bb2A02
3.30.497.10 Alpha Beta 2-Layer Sandwich Antithrombin; Chain I, domain 2 Antithrombin, subunit I, domain 2 4bb2A01
2ARRA 3EOXA 3DRUA 4AQHA 3NDAA 1KCTA 3F5NA 1JTIA 2DUTA 4ZK0A 3CWMA 2WY0C 2WXZA 4AJUA 4RO9A 4AU3A 1SEKA 2PEFA 4AU2A 2ACHA 1LJ5A 1OVAC 3F1SA 2V95A 2H4RA 2XN6A 5CE0A 4BB2A 4ROAA 1E04I 1JVQI 3UT3A 4DTEA 1XQGA 4YIAA 1QMNA 1C5GA 1UHGA 1R1LI 1XQJA 4P0FA 2VDXA 2PEEA 3NDDA 3DRMA 5EI0A 4EB1L 2QUGA 1DVMA 1OO8A 5HGCA 2OAYA 8APIA 1OPHA 5CDZA 3LW2A 4EB1I 4C41A 2XN3A 3OZQA 4AU3B 3VVJA 4P0OA 3B9FI 3T1PA 3STOA 1DVNA 4CAAA 5C98A 1JMOA 1HLEA 2CEOA 2VH4A 1OC0A 1JRRA 2B5TI 2WXXA 4ZK3A 1TB6I 1DZGL 1SR5A 2ARQA 4C49A 1YXAA 2WXWA 1LQ8A 1BR8I 1ANTI 2ZNHA 4PYWA 2XN5A 2H4PA 1PSIA 4R9IA 2WY1A 2HI9A 1DZGI 1LK6I 1OVAB 1QLPA 2R9YA 3R4LA 4IF8A 4Y3KA 3FGQA 1M93B 2XN7A 3CWLA 1ATTA 1C8OA 1D5SA 2ANTI 2RIVA 2OL2A 2BEHL 1SNGA 4RSQA 5INWA 1OYHL 1IZ2A 4G8RA 4X30A 1WZ9A 4GA7A 2BEHI 4AJTA 2D26A 1OYHI 4ROBA 1QMBA 1AZXI 1JJOC 1XU8A 1A7CA 3Q02A 5IO1A 3DY0A 3H5CA 3NDFA 7APIA 3ZHAA 1JMJA 3NE4A 1F0CA 4G8OA 1E05I 4DY7C 9APIA 1ATHA 2B4XL 1DB2A 1MTPA 2ZV6A 3LE2A 1BY7A 3PZFA 2WXYC 1NQ9I 2VDYA 2B4XI 4KDSA 1T1FA 1DZHL 2RIWA 4IC0A 5BRRI 3PB1I 2GD4C 1DZHI 1HP7A 4DY0A 3DLWA 1B3KA 3KCGI 1K9OI 2HIJL 5CDXA 1EZXA 3Q03A 2WXZC 1ATUA 3EVJI 4AU4A 1AS4A 1E03I 1OVAA 4AFXA 9PAIA 1IMVA 3CVMA 4Y40A 2HIJI 3F02A 3CAAA 2H4QA
chains in the Genus database with same CATH superfamily
2ARRA 3EOXA 3DRUA 4AQHA 3NDAA 1KCTA 3F5NA 1JTIA 2DUTA 4ZK0A 3CWMA 2WY0C 2WXZA 4AJUA 4RO9A 4AU3A 1SEKA 2PEFA 4AU2A 2ACHA 1LJ5A 1OVAC 3F1SA 2V95A 2H4RA 2XN6A 5CE0A 4BB2A 4ROAA 1E04I 1JVQI 3UT3A 4DTEA 1XQGA 4YIAA 1QMNA 1C5GA 1UHGA 1R1LI 1XQJA 4P0FA 2VDXA 2PEEA 3NDDA 3DRMA 5EI0A 4EB1L 2QUGA 1DVMA 1OO8A 5HGCA 2OAYA 8APIA 1OPHA 5CDZA 3LW2A 4EB1I 4C41A 2XN3A 3OZQA 4AU3B 3VVJA 4P0OA 3B9FI 3T1PA 3STOA 1DVNA 4CAAA 5C98A 1JMOA 1HLEA 2CEOA 2VH4A 1OC0A 1JRRA 2B5TI 2WXXA 4ZK3A 1TB6I 1DZGL 1SR5A 2ARQA 4C49A 1YXAA 2WXWA 1LQ8A 1BR8I 1ANTI 2ZNHA 4PYWA 2XN5A 2H4PA 1PSIA 4R9IA 2WY1A 2HI9A 1DZGI 1LK6I 1OVAB 1QLPA 2R9YA 3R4LA 4IF8A 4Y3KA 3FGQA 1M93B 2XN7A 3CWLA 1ATTA 1C8OA 1D5SA 2ANTI 2RIVA 2OL2A 2BEHL 1SNGA 4RSQA 5INWA 1OYHL 1IZ2A 4G8RA 4X30A 1WZ9A 4GA7A 2BEHI 4AJTA 2D26A 1OYHI 4ROBA 1QMBA 1AZXI 1JJOC 1XU8A 1A7CA 3Q02A 5IO1A 3DY0A 3H5CA 3NDFA 7APIA 3ZHAA 1JMJA 3NE4A 1F0CA 4G8OA 1E05I 4DY7C 9APIA 1ATHA 2B4XL 1DB2A 1MTPA 2ZV6A 3LE2A 1BY7A 3PZFA 2WXYC 1NQ9I 2VDYA 2B4XI 4KDSA 1T1FA 1DZHL 2RIWA 4IC0A 5BRRI 3PB1I 2GD4C 1DZHI 1HP7A 4DY0A 3DLWA 1B3KA 3KCGI 1K9OI 2HIJL 5CDXA 1EZXA 3Q03A 2WXZC 1ATUA 3EVJI 4AU4A 1AS4A 1E03I 1OVAA 4AFXA 9PAIA 1IMVA 3CVMA 4Y40A 2HIJI 3F02A 3CAAA 2H4QA
chains in the Genus database with same CATH topology
2ARRA 3EOXA 3DRUA 4AQHA 3NDAA 1KCTA 3F5NA 1JTIA 2DUTA 4ZK0A 3CWMA 2WY0C 2WXZA 4AJUA 4RO9A 4AU3A 1SEKA 2PEFA 4AU2A 2ACHA 1LJ5A 1OVAC 3F1SA 2V95A 2H4RA 2XN6A 5CE0A 4BB2A 4ROAA 1E04I 1JVQI 3UT3A 4DTEA 1XQGA 4YIAA 1QMNA 1C5GA 1UHGA 1R1LI 1XQJA 4P0FA 2VDXA 2PEEA 3NDDA 3DRMA 5EI0A 4EB1L 2QUGA 1DVMA 1OO8A 5HGCA 2OAYA 8APIA 1OPHA 5CDZA 3LW2A 4EB1I 4C41A 2XN3A 3OZQA 4AU3B 3VVJA 4P0OA 3B9FI 3T1PA 3STOA 1DVNA 4CAAA 5C98A 1JMOA 1HLEA 2CEOA 2VH4A 1OC0A 1JRRA 2B5TI 2WXXA 4ZK3A 1TB6I 1DZGL 1SR5A 2ARQA 4C49A 1YXAA 2WXWA 1LQ8A 1BR8I 1ANTI 2ZNHA 4PYWA 2XN5A 2H4PA 1PSIA 4R9IA 2WY1A 2HI9A 1DZGI 1LK6I 1OVAB 1QLPA 2R9YA 3R4LA 4IF8A 4Y3KA 3FGQA 1M93B 2XN7A 3CWLA 1ATTA 1C8OA 1D5SA 2ANTI 2RIVA 2OL2A 2BEHL 1SNGA 4RSQA 5INWA 1OYHL 1IZ2A 4G8RA 4X30A 1WZ9A 4GA7A 2BEHI 4AJTA 2D26A 1OYHI 4ROBA 1QMBA 1AZXI 1JJOC 1XU8A 1A7CA 3Q02A 5IO1A 3DY0A 3H5CA 3NDFA 7APIA 3ZHAA 1JMJA 3NE4A 1F0CA 4G8OA 1E05I 4DY7C 9APIA 1ATHA 2B4XL 1DB2A 1MTPA 2ZV6A 3LE2A 1BY7A 3PZFA 2WXYC 1NQ9I 2VDYA 2B4XI 4KDSA 1T1FA 1DZHL 2RIWA 4IC0A 5BRRI 3PB1I 2GD4C 1DZHI 1HP7A 4DY0A 3DLWA 1B3KA 3KCGI 1K9OI 2HIJL 5CDXA 1EZXA 3Q03A 2WXZC 1ATUA 3EVJI 4AU4A 1AS4A 1E03I 1OVAA 4AFXA 9PAIA 1IMVA 3CVMA 4Y40A 2HIJI 3F02A 3CAAA 2H4QA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ARR A;  3EOX A;  3DRU A;  4AQH A;  3NDA A;  1KCT A;  3F5N A;  1JTI A;  2DUT A;  4ZK0 A;  3CWM A;  2WY0 C;  2WXZ A;  4AJU A;  4RO9 A;  4AU3 A;  1SEK A;  2PEF A;  4AU2 A;  2ACH A;  1LJ5 A;  1OVA C;  3F1S A;  2V95 A;  2H4R A;  2XN6 A;  5CE0 A;  4BB2 A;  4ROA A;  1E04 I;  1JVQ I;  3UT3 A;  4DTE A;  1XQG A;  4YIA A;  1QMN A;  1C5G A;  1UHG A;  1R1L I;  1XQJ A;  4P0F A;  2VDX A;  2PEE A;  3NDD A;  3DRM A;  5EI0 A;  4EB1 L;  2QUG A;  1DVM A;  1OO8 A;  5HGC A;  2OAY A;  8API A;  1OPH A;  5CDZ A;  3LW2 A;  4EB1 I;  4C41 A;  2XN3 A;  3OZQ A;  4AU3 B;  3VVJ A;  4P0O A;  3B9F I;  3T1P A;  3STO A;  1DVN A;  4CAA A;  5C98 A;  1JMO A;  1HLE A;  2CEO A;  2VH4 A;  1OC0 A;  1JRR A;  2B5T I;  2WXX A;  4ZK3 A;  1TB6 I;  1DZG L;  1SR5 A;  2ARQ A;  4C49 A;  1YXA A;  2WXW A;  1LQ8 A;  1BR8 I;  1ANT I;  2ZNH A;  4PYW A;  2XN5 A;  2H4P A;  1PSI A;  4R9I A;  2WY1 A;  2HI9 A;  1DZG I;  1LK6 I;  1OVA B;  1QLP A;  2R9Y A;  3R4L A;  4IF8 A;  4Y3K A;  3FGQ A;  1M93 B;  2XN7 A;  3CWL A;  1ATT A;  1C8O A;  1D5S A;  2ANT I;  2RIV A;  2OL2 A;  2BEH L;  1SNG A;  4RSQ A;  5INW A;  1OYH L;  1IZ2 A;  4G8R A;  4X30 A;  1WZ9 A;  4GA7 A;  2BEH I;  4AJT A;  2D26 A;  1OYH I;  4ROB A;  1QMB A;  1AZX I;  1JJO C;  1XU8 A;  1A7C A;  3Q02 A;  5IO1 A;  3DY0 A;  3H5C A;  3NDF A;  7API A;  3ZHA A;  1JMJ A;  3NE4 A;  1F0C A;  4G8O A;  1E05 I;  4DY7 C;  9API A;  1ATH A;  2B4X L;  1DB2 A;  1MTP A;  2ZV6 A;  3LE2 A;  1BY7 A;  3PZF A;  2WXY C;  1NQ9 I;  2VDY A;  2B4X I;  4KDS A;  1T1F A;  1DZH L;  2RIW A;  4IC0 A;  5BRR I;  3PB1 I;  2GD4 C;  1DZH I;  1HP7 A;  4DY0 A;  3DLW A;  1B3K A;  3KCG I;  1K9O I;  2HIJ L;  5CDX A;  1EZX A;  3Q03 A;  2WXZ C;  1ATU A;  3EVJ I;  4AU4 A;  1AS4 A;  1E03 I;  1OVA A;  4AFX A;  9PAI A;  1IMV A;  3CVM A;  4Y40 A;  2HIJ I;  3F02 A;  3CAA A;  2H4Q A; 
#chains in the Genus database with same CATH topology
 2ARR A;  3EOX A;  3DRU A;  4AQH A;  3NDA A;  1KCT A;  3F5N A;  1JTI A;  2DUT A;  4ZK0 A;  3CWM A;  2WY0 C;  2WXZ A;  4AJU A;  4RO9 A;  4AU3 A;  1SEK A;  2PEF A;  4AU2 A;  2ACH A;  1LJ5 A;  1OVA C;  3F1S A;  2V95 A;  2H4R A;  2XN6 A;  5CE0 A;  4BB2 A;  4ROA A;  1E04 I;  1JVQ I;  3UT3 A;  4DTE A;  1XQG A;  4YIA A;  1QMN A;  1C5G A;  1UHG A;  1R1L I;  1XQJ A;  4P0F A;  2VDX A;  2PEE A;  3NDD A;  3DRM A;  5EI0 A;  4EB1 L;  2QUG A;  1DVM A;  1OO8 A;  5HGC A;  2OAY A;  8API A;  1OPH A;  5CDZ A;  3LW2 A;  4EB1 I;  4C41 A;  2XN3 A;  3OZQ A;  4AU3 B;  3VVJ A;  4P0O A;  3B9F I;  3T1P A;  3STO A;  1DVN A;  4CAA A;  5C98 A;  1JMO A;  1HLE A;  2CEO A;  2VH4 A;  1OC0 A;  1JRR A;  2B5T I;  2WXX A;  4ZK3 A;  1TB6 I;  1DZG L;  1SR5 A;  2ARQ A;  4C49 A;  1YXA A;  2WXW A;  1LQ8 A;  1BR8 I;  1ANT I;  2ZNH A;  4PYW A;  2XN5 A;  2H4P A;  1PSI A;  4R9I A;  2WY1 A;  2HI9 A;  1DZG I;  1LK6 I;  1OVA B;  1QLP A;  2R9Y A;  3R4L A;  4IF8 A;  4Y3K A;  3FGQ A;  1M93 B;  2XN7 A;  3CWL A;  1ATT A;  1C8O A;  1D5S A;  2ANT I;  2RIV A;  2OL2 A;  2BEH L;  1SNG A;  4RSQ A;  5INW A;  1OYH L;  1IZ2 A;  4G8R A;  4X30 A;  1WZ9 A;  4GA7 A;  2BEH I;  4AJT A;  2D26 A;  1OYH I;  4ROB A;  1QMB A;  1AZX I;  1JJO C;  1XU8 A;  1A7C A;  3Q02 A;  5IO1 A;  3DY0 A;  3H5C A;  3NDF A;  7API A;  3ZHA A;  1JMJ A;  3NE4 A;  1F0C A;  4G8O A;  1E05 I;  4DY7 C;  9API A;  1ATH A;  2B4X L;  1DB2 A;  1MTP A;  2ZV6 A;  3LE2 A;  1BY7 A;  3PZF A;  2WXY C;  1NQ9 I;  2VDY A;  2B4X I;  4KDS A;  1T1F A;  1DZH L;  2RIW A;  4IC0 A;  5BRR I;  3PB1 I;  2GD4 C;  1DZH I;  1HP7 A;  4DY0 A;  3DLW A;  1B3K A;  3KCG I;  1K9O I;  2HIJ L;  5CDX A;  1EZX A;  3Q03 A;  2WXZ C;  1ATU A;  3EVJ I;  4AU4 A;  1AS4 A;  1E03 I;  1OVA A;  4AFX A;  9PAI A;  1IMV A;  3CVM A;  4Y40 A;  2HIJ I;  3F02 A;  3CAA A;  2H4Q A; 
#chains in the Genus database with same CATH homology
 2ARR A;  3EOX A;  3DRU A;  4AQH A;  3NDA A;  1KCT A;  3F5N A;  1JTI A;  2DUT A;  4ZK0 A;  3CWM A;  2WY0 C;  2WXZ A;  4AJU A;  4RO9 A;  4AU3 A;  1SEK A;  2PEF A;  4AU2 A;  2ACH A;  1LJ5 A;  1OVA C;  3F1S A;  2V95 A;  2H4R A;  2XN6 A;  5CE0 A;  4BB2 A;  4ROA A;  1E04 I;  1JVQ I;  3UT3 A;  4DTE A;  1XQG A;  4YIA A;  1QMN A;  1C5G A;  1UHG A;  1R1L I;  1XQJ A;  4P0F A;  2VDX A;  2PEE A;  3NDD A;  3DRM A;  5EI0 A;  4EB1 L;  2QUG A;  1DVM A;  1OO8 A;  5HGC A;  2OAY A;  8API A;  1OPH A;  5CDZ A;  3LW2 A;  4EB1 I;  4C41 A;  2XN3 A;  3OZQ A;  4AU3 B;  3VVJ A;  4P0O A;  3B9F I;  3T1P A;  3STO A;  1DVN A;  4CAA A;  5C98 A;  1JMO A;  1HLE A;  2CEO A;  2VH4 A;  1OC0 A;  1JRR A;  2B5T I;  2WXX A;  4ZK3 A;  1TB6 I;  1DZG L;  1SR5 A;  2ARQ A;  4C49 A;  1YXA A;  2WXW A;  1LQ8 A;  1BR8 I;  1ANT I;  2ZNH A;  4PYW A;  2XN5 A;  2H4P A;  1PSI A;  4R9I A;  2WY1 A;  2HI9 A;  1DZG I;  1LK6 I;  1OVA B;  1QLP A;  2R9Y A;  3R4L A;  4IF8 A;  4Y3K A;  3FGQ A;  1M93 B;  2XN7 A;  3CWL A;  1ATT A;  1C8O A;  1D5S A;  2ANT I;  2RIV A;  2OL2 A;  2BEH L;  1SNG A;  4RSQ A;  5INW A;  1OYH L;  1IZ2 A;  4G8R A;  4X30 A;  1WZ9 A;  4GA7 A;  2BEH I;  4AJT A;  2D26 A;  1OYH I;  4ROB A;  1QMB A;  1AZX I;  1JJO C;  1XU8 A;  1A7C A;  3Q02 A;  5IO1 A;  3DY0 A;  3H5C A;  3NDF A;  7API A;  3ZHA A;  1JMJ A;  3NE4 A;  1F0C A;  4G8O A;  1E05 I;  4DY7 C;  9API A;  1ATH A;  2B4X L;  1DB2 A;  1MTP A;  2ZV6 A;  3LE2 A;  1BY7 A;  3PZF A;  2WXY C;  1NQ9 I;  2VDY A;  2B4X I;  4KDS A;  1T1F A;  1DZH L;  2RIW A;  4IC0 A;  5BRR I;  3PB1 I;  2GD4 C;  1DZH I;  1HP7 A;  4DY0 A;  3DLW A;  1B3K A;  3KCG I;  1K9O I;  2HIJ L;  5CDX A;  1EZX A;  3Q03 A;  2WXZ C;  1ATU A;  3EVJ I;  4AU4 A;  1AS4 A;  1E03 I;  1OVA A;  4AFX A;  9PAI A;  1IMV A;  3CVM A;  4Y40 A;  2HIJ I;  3F02 A;  3CAA A;  2H4Q A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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