4C41A

Corticosteroid-binding globulin with engineered disulphide bridge between residues 100 and 236
Total Genus 117
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
369
structure length
367
Chain Sequence
RGLASANVDFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNLTERSETEIHQGFQHLHQLFAKSDTCLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAMNFQDWATASRQINSYVKNKTQGKIVDLFSGLDSPAILVLVNYIFFKGTWTQPFDLASTREENFYVDETTVVKVPMMLQSSTISYLHDSELPCQLVQMNYCGNGTVFFILPDKGKMNTVIAALSRDTINRWSAGLTSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTNQANFSRITQDAQLKSSKVVHKAVLQLNEEGVDTAGSTGVTLNLRPIILRFNQPFIIMIFDHFTWSSLFLARVMNPV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords CORTICOSTEROID-BINDING GLOBULIN
publication title Towards Engineering Hormone-Binding Globulins as Drug Delivery Agents.
pubmed doi rcsb
source organism Homo sapiens
total genus 117
structure length 367
sequence length 369
ec nomenclature
pdb deposition date 2013-08-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00079 Serpin Serpin (serine protease inhibitor)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.39.10 Mainly Beta Roll Alpha-1-antitrypsin; domain 1 Alpha-1-antitrypsin, domain 1 4c41A02
3.30.497.10 Alpha Beta 2-Layer Sandwich Antithrombin; Chain I, domain 2 Antithrombin, subunit I, domain 2 4c41A01
1TB6I 1EZXA 2ZV6A 3DY0A 4AU2A 5EI0A 4RSQA 2RIVA 1DZGL 8APIA 1LJ5A 2H4QA 2VDXA 1K9OI 4R9IA 1YXAA 4AFXA 1T1FA 1UHGA 1D5SA 1OVAA 2D26A 3NDAA 4CAAA 1DVNA 1F0CA 3EOXA 3Q03A 2VH4A 1IMVA 2H4RA 5C98A 2GD4C 2WXXA 1HP7A 1XQJA 4BB2A 4Y40A 5IO1A 1HLEA 3F5NA 5INWA 4AQHA 4G8RA 1OYHI 1AZXI 3B9FI 2QUGA 3CVMA 3STOA 4C41A 3UT3A 1OPHA 1OYHL 3PB1I 4Y3KA 1LQ8A 1OVAB 4X30A 2PEEA 3PZFA 1SNGA 1XQGA 9PAIA 2ARQA 2WY0C 1XU8A 1PSIA 3NE4A 3CWLA 3NDFA 2XN5A 1JJOC 1JTIA 1ANTI 1OO8A 2VDYA 4AU3A 1QLPA 4GA7A 1E05I 3LW2A 4G8OA 4AJTA 2WY1A 3ZHAA 3F1SA 2R9YA 4ROBA 4AU4A 9APIA 1JRRA 2BEHI 1E03I 1ATHA 1JVQI 2OL2A 4DY7C 1DZHI 2WXZA 3FGQA 3H5CA 3NDDA 2BEHL 4AU3B 2ARRA 4DTEA 3DRMA 1DZHL 5BRRI 5CDXA 1BY7A 1BR8I 1SR5A 5CE0A 3F02A 4ZK0A 4ROAA 1OVAC 2WXWA 2CEOA 2WXYC 2OAYA 3KCGI 4IC0A 1AS4A 4PYWA 2B5TI 1LK6I 1NQ9I 3EVJI 4EB1I 2XN7A 4YIAA 5HGCA 3CAAA 4EB1L 1IZ2A 1MTPA 1ATTA 3OZQA 4P0FA 1C8OA 2HI9A 1OC0A 2B4XI 4DY0A 1A7CA 4C49A 1M93B 2H4PA 2WXZC 3T1PA 2ANTI 2ZNHA 4RO9A 1DVMA 1SEKA 2B4XL 4AJUA 2DUTA 1WZ9A 5CDZA 1DB2A 3CWMA 1QMNA 2HIJI 2V95A 3DLWA 4KDSA 3DRUA 3Q02A 4P0OA 2RIWA 2XN3A 1QMBA 2HIJL 4IF8A 1JMOA 3R4LA 2PEFA 2ACHA 4ZK3A 3VVJA 1B3KA 1E04I 1C5GA 1JMJA 7APIA 1KCTA 3LE2A 1ATUA 1DZGI 1R1LI 2XN6A
chains in the Genus database with same CATH superfamily
1TB6I 1EZXA 2ZV6A 3DY0A 4AU2A 5EI0A 4RSQA 2RIVA 1DZGL 8APIA 1LJ5A 2H4QA 2VDXA 1K9OI 4R9IA 1YXAA 4AFXA 1T1FA 1UHGA 1D5SA 1OVAA 2D26A 3NDAA 4CAAA 1DVNA 1F0CA 3EOXA 3Q03A 2VH4A 1IMVA 2H4RA 5C98A 2GD4C 2WXXA 1HP7A 1XQJA 4BB2A 4Y40A 5IO1A 1HLEA 3F5NA 5INWA 4AQHA 4G8RA 1OYHI 1AZXI 3B9FI 2QUGA 3CVMA 3STOA 4C41A 3UT3A 1OPHA 1OYHL 3PB1I 4Y3KA 1LQ8A 1OVAB 4X30A 2PEEA 3PZFA 1SNGA 1XQGA 9PAIA 2ARQA 2WY0C 1XU8A 1PSIA 3NE4A 3CWLA 3NDFA 2XN5A 1JJOC 1JTIA 1ANTI 1OO8A 2VDYA 4AU3A 1QLPA 4GA7A 1E05I 3LW2A 4G8OA 4AJTA 2WY1A 3ZHAA 3F1SA 2R9YA 4ROBA 4AU4A 9APIA 1JRRA 2BEHI 1E03I 1ATHA 1JVQI 2OL2A 4DY7C 1DZHI 2WXZA 3FGQA 3H5CA 3NDDA 2BEHL 4AU3B 2ARRA 4DTEA 3DRMA 1DZHL 5BRRI 5CDXA 1BY7A 1BR8I 1SR5A 5CE0A 3F02A 4ZK0A 4ROAA 1OVAC 2WXWA 2CEOA 2WXYC 2OAYA 3KCGI 4IC0A 1AS4A 4PYWA 2B5TI 1LK6I 1NQ9I 3EVJI 4EB1I 2XN7A 4YIAA 5HGCA 3CAAA 4EB1L 1IZ2A 1MTPA 1ATTA 3OZQA 4P0FA 1C8OA 2HI9A 1OC0A 2B4XI 4DY0A 1A7CA 4C49A 1M93B 2H4PA 2WXZC 3T1PA 2ANTI 2ZNHA 4RO9A 1DVMA 1SEKA 2B4XL 4AJUA 2DUTA 1WZ9A 5CDZA 1DB2A 3CWMA 1QMNA 2HIJI 2V95A 3DLWA 4KDSA 3DRUA 3Q02A 4P0OA 2RIWA 2XN3A 1QMBA 2HIJL 4IF8A 1JMOA 3R4LA 2PEFA 2ACHA 4ZK3A 3VVJA 1B3KA 1E04I 1C5GA 1JMJA 7APIA 1KCTA 3LE2A 1ATUA 1DZGI 1R1LI 2XN6A
chains in the Genus database with same CATH topology
1TB6I 1EZXA 2ZV6A 3DY0A 4AU2A 5EI0A 4RSQA 2RIVA 1DZGL 8APIA 1LJ5A 2H4QA 2VDXA 1K9OI 4R9IA 1YXAA 4AFXA 1T1FA 1UHGA 1D5SA 1OVAA 2D26A 3NDAA 4CAAA 1DVNA 1F0CA 3EOXA 3Q03A 2VH4A 1IMVA 2H4RA 5C98A 2GD4C 2WXXA 1HP7A 1XQJA 4BB2A 4Y40A 5IO1A 1HLEA 3F5NA 5INWA 4AQHA 4G8RA 1OYHI 1AZXI 3B9FI 2QUGA 3CVMA 3STOA 4C41A 3UT3A 1OPHA 1OYHL 3PB1I 4Y3KA 1LQ8A 1OVAB 4X30A 2PEEA 3PZFA 1SNGA 1XQGA 9PAIA 2ARQA 2WY0C 1XU8A 1PSIA 3NE4A 3CWLA 3NDFA 2XN5A 1JJOC 1JTIA 1ANTI 1OO8A 2VDYA 4AU3A 1QLPA 4GA7A 1E05I 3LW2A 4G8OA 4AJTA 2WY1A 3ZHAA 3F1SA 2R9YA 4ROBA 4AU4A 9APIA 1JRRA 2BEHI 1E03I 1ATHA 1JVQI 2OL2A 4DY7C 1DZHI 2WXZA 3FGQA 3H5CA 3NDDA 2BEHL 4AU3B 2ARRA 4DTEA 3DRMA 1DZHL 5BRRI 5CDXA 1BY7A 1BR8I 1SR5A 5CE0A 3F02A 4ZK0A 4ROAA 1OVAC 2WXWA 2CEOA 2WXYC 2OAYA 3KCGI 4IC0A 1AS4A 4PYWA 2B5TI 1LK6I 1NQ9I 3EVJI 4EB1I 2XN7A 4YIAA 5HGCA 3CAAA 4EB1L 1IZ2A 1MTPA 1ATTA 3OZQA 4P0FA 1C8OA 2HI9A 1OC0A 2B4XI 4DY0A 1A7CA 4C49A 1M93B 2H4PA 2WXZC 3T1PA 2ANTI 2ZNHA 4RO9A 1DVMA 1SEKA 2B4XL 4AJUA 2DUTA 1WZ9A 5CDZA 1DB2A 3CWMA 1QMNA 2HIJI 2V95A 3DLWA 4KDSA 3DRUA 3Q02A 4P0OA 2RIWA 2XN3A 1QMBA 2HIJL 4IF8A 1JMOA 3R4LA 2PEFA 2ACHA 4ZK3A 3VVJA 1B3KA 1E04I 1C5GA 1JMJA 7APIA 1KCTA 3LE2A 1ATUA 1DZGI 1R1LI 2XN6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TB6 I;  1EZX A;  2ZV6 A;  3DY0 A;  4AU2 A;  5EI0 A;  4RSQ A;  2RIV A;  1DZG L;  8API A;  1LJ5 A;  2H4Q A;  2VDX A;  1K9O I;  4R9I A;  1YXA A;  4AFX A;  1T1F A;  1UHG A;  1D5S A;  1OVA A;  2D26 A;  3NDA A;  4CAA A;  1DVN A;  1F0C A;  3EOX A;  3Q03 A;  2VH4 A;  1IMV A;  2H4R A;  5C98 A;  2GD4 C;  2WXX A;  1HP7 A;  1XQJ A;  4BB2 A;  4Y40 A;  5IO1 A;  1HLE A;  3F5N A;  5INW A;  4AQH A;  4G8R A;  1OYH I;  1AZX I;  3B9F I;  2QUG A;  3CVM A;  3STO A;  4C41 A;  3UT3 A;  1OPH A;  1OYH L;  3PB1 I;  4Y3K A;  1LQ8 A;  1OVA B;  4X30 A;  2PEE A;  3PZF A;  1SNG A;  1XQG A;  9PAI A;  2ARQ A;  2WY0 C;  1XU8 A;  1PSI A;  3NE4 A;  3CWL A;  3NDF A;  2XN5 A;  1JJO C;  1JTI A;  1ANT I;  1OO8 A;  2VDY A;  4AU3 A;  1QLP A;  4GA7 A;  1E05 I;  3LW2 A;  4G8O A;  4AJT A;  2WY1 A;  3ZHA A;  3F1S A;  2R9Y A;  4ROB A;  4AU4 A;  9API A;  1JRR A;  2BEH I;  1E03 I;  1ATH A;  1JVQ I;  2OL2 A;  4DY7 C;  1DZH I;  2WXZ A;  3FGQ A;  3H5C A;  3NDD A;  2BEH L;  4AU3 B;  2ARR A;  4DTE A;  3DRM A;  1DZH L;  5BRR I;  5CDX A;  1BY7 A;  1BR8 I;  1SR5 A;  5CE0 A;  3F02 A;  4ZK0 A;  4ROA A;  1OVA C;  2WXW A;  2CEO A;  2WXY C;  2OAY A;  3KCG I;  4IC0 A;  1AS4 A;  4PYW A;  2B5T I;  1LK6 I;  1NQ9 I;  3EVJ I;  4EB1 I;  2XN7 A;  4YIA A;  5HGC A;  3CAA A;  4EB1 L;  1IZ2 A;  1MTP A;  1ATT A;  3OZQ A;  4P0F A;  1C8O A;  2HI9 A;  1OC0 A;  2B4X I;  4DY0 A;  1A7C A;  4C49 A;  1M93 B;  2H4P A;  2WXZ C;  3T1P A;  2ANT I;  2ZNH A;  4RO9 A;  1DVM A;  1SEK A;  2B4X L;  4AJU A;  2DUT A;  1WZ9 A;  5CDZ A;  1DB2 A;  3CWM A;  1QMN A;  2HIJ I;  2V95 A;  3DLW A;  4KDS A;  3DRU A;  3Q02 A;  4P0O A;  2RIW A;  2XN3 A;  1QMB A;  2HIJ L;  4IF8 A;  1JMO A;  3R4L A;  2PEF A;  2ACH A;  4ZK3 A;  3VVJ A;  1B3K A;  1E04 I;  1C5G A;  1JMJ A;  7API A;  1KCT A;  3LE2 A;  1ATU A;  1DZG I;  1R1L I;  2XN6 A; 
#chains in the Genus database with same CATH topology
 1TB6 I;  1EZX A;  2ZV6 A;  3DY0 A;  4AU2 A;  5EI0 A;  4RSQ A;  2RIV A;  1DZG L;  8API A;  1LJ5 A;  2H4Q A;  2VDX A;  1K9O I;  4R9I A;  1YXA A;  4AFX A;  1T1F A;  1UHG A;  1D5S A;  1OVA A;  2D26 A;  3NDA A;  4CAA A;  1DVN A;  1F0C A;  3EOX A;  3Q03 A;  2VH4 A;  1IMV A;  2H4R A;  5C98 A;  2GD4 C;  2WXX A;  1HP7 A;  1XQJ A;  4BB2 A;  4Y40 A;  5IO1 A;  1HLE A;  3F5N A;  5INW A;  4AQH A;  4G8R A;  1OYH I;  1AZX I;  3B9F I;  2QUG A;  3CVM A;  3STO A;  4C41 A;  3UT3 A;  1OPH A;  1OYH L;  3PB1 I;  4Y3K A;  1LQ8 A;  1OVA B;  4X30 A;  2PEE A;  3PZF A;  1SNG A;  1XQG A;  9PAI A;  2ARQ A;  2WY0 C;  1XU8 A;  1PSI A;  3NE4 A;  3CWL A;  3NDF A;  2XN5 A;  1JJO C;  1JTI A;  1ANT I;  1OO8 A;  2VDY A;  4AU3 A;  1QLP A;  4GA7 A;  1E05 I;  3LW2 A;  4G8O A;  4AJT A;  2WY1 A;  3ZHA A;  3F1S A;  2R9Y A;  4ROB A;  4AU4 A;  9API A;  1JRR A;  2BEH I;  1E03 I;  1ATH A;  1JVQ I;  2OL2 A;  4DY7 C;  1DZH I;  2WXZ A;  3FGQ A;  3H5C A;  3NDD A;  2BEH L;  4AU3 B;  2ARR A;  4DTE A;  3DRM A;  1DZH L;  5BRR I;  5CDX A;  1BY7 A;  1BR8 I;  1SR5 A;  5CE0 A;  3F02 A;  4ZK0 A;  4ROA A;  1OVA C;  2WXW A;  2CEO A;  2WXY C;  2OAY A;  3KCG I;  4IC0 A;  1AS4 A;  4PYW A;  2B5T I;  1LK6 I;  1NQ9 I;  3EVJ I;  4EB1 I;  2XN7 A;  4YIA A;  5HGC A;  3CAA A;  4EB1 L;  1IZ2 A;  1MTP A;  1ATT A;  3OZQ A;  4P0F A;  1C8O A;  2HI9 A;  1OC0 A;  2B4X I;  4DY0 A;  1A7C A;  4C49 A;  1M93 B;  2H4P A;  2WXZ C;  3T1P A;  2ANT I;  2ZNH A;  4RO9 A;  1DVM A;  1SEK A;  2B4X L;  4AJU A;  2DUT A;  1WZ9 A;  5CDZ A;  1DB2 A;  3CWM A;  1QMN A;  2HIJ I;  2V95 A;  3DLW A;  4KDS A;  3DRU A;  3Q02 A;  4P0O A;  2RIW A;  2XN3 A;  1QMB A;  2HIJ L;  4IF8 A;  1JMO A;  3R4L A;  2PEF A;  2ACH A;  4ZK3 A;  3VVJ A;  1B3K A;  1E04 I;  1C5G A;  1JMJ A;  7API A;  1KCT A;  3LE2 A;  1ATU A;  1DZG I;  1R1L I;  2XN6 A; 
#chains in the Genus database with same CATH homology
 1TB6 I;  1EZX A;  2ZV6 A;  3DY0 A;  4AU2 A;  5EI0 A;  4RSQ A;  2RIV A;  1DZG L;  8API A;  1LJ5 A;  2H4Q A;  2VDX A;  1K9O I;  4R9I A;  1YXA A;  4AFX A;  1T1F A;  1UHG A;  1D5S A;  1OVA A;  2D26 A;  3NDA A;  4CAA A;  1DVN A;  1F0C A;  3EOX A;  3Q03 A;  2VH4 A;  1IMV A;  2H4R A;  5C98 A;  2GD4 C;  2WXX A;  1HP7 A;  1XQJ A;  4BB2 A;  4Y40 A;  5IO1 A;  1HLE A;  3F5N A;  5INW A;  4AQH A;  4G8R A;  1OYH I;  1AZX I;  3B9F I;  2QUG A;  3CVM A;  3STO A;  4C41 A;  3UT3 A;  1OPH A;  1OYH L;  3PB1 I;  4Y3K A;  1LQ8 A;  1OVA B;  4X30 A;  2PEE A;  3PZF A;  1SNG A;  1XQG A;  9PAI A;  2ARQ A;  2WY0 C;  1XU8 A;  1PSI A;  3NE4 A;  3CWL A;  3NDF A;  2XN5 A;  1JJO C;  1JTI A;  1ANT I;  1OO8 A;  2VDY A;  4AU3 A;  1QLP A;  4GA7 A;  1E05 I;  3LW2 A;  4G8O A;  4AJT A;  2WY1 A;  3ZHA A;  3F1S A;  2R9Y A;  4ROB A;  4AU4 A;  9API A;  1JRR A;  2BEH I;  1E03 I;  1ATH A;  1JVQ I;  2OL2 A;  4DY7 C;  1DZH I;  2WXZ A;  3FGQ A;  3H5C A;  3NDD A;  2BEH L;  4AU3 B;  2ARR A;  4DTE A;  3DRM A;  1DZH L;  5BRR I;  5CDX A;  1BY7 A;  1BR8 I;  1SR5 A;  5CE0 A;  3F02 A;  4ZK0 A;  4ROA A;  1OVA C;  2WXW A;  2CEO A;  2WXY C;  2OAY A;  3KCG I;  4IC0 A;  1AS4 A;  4PYW A;  2B5T I;  1LK6 I;  1NQ9 I;  3EVJ I;  4EB1 I;  2XN7 A;  4YIA A;  5HGC A;  3CAA A;  4EB1 L;  1IZ2 A;  1MTP A;  1ATT A;  3OZQ A;  4P0F A;  1C8O A;  2HI9 A;  1OC0 A;  2B4X I;  4DY0 A;  1A7C A;  4C49 A;  1M93 B;  2H4P A;  2WXZ C;  3T1P A;  2ANT I;  2ZNH A;  4RO9 A;  1DVM A;  1SEK A;  2B4X L;  4AJU A;  2DUT A;  1WZ9 A;  5CDZ A;  1DB2 A;  3CWM A;  1QMN A;  2HIJ I;  2V95 A;  3DLW A;  4KDS A;  3DRU A;  3Q02 A;  4P0O A;  2RIW A;  2XN3 A;  1QMB A;  2HIJ L;  4IF8 A;  1JMO A;  3R4L A;  2PEF A;  2ACH A;  4ZK3 A;  3VVJ A;  1B3K A;  1E04 I;  1C5G A;  1JMJ A;  7API A;  1KCT A;  3LE2 A;  1ATU A;  1DZG I;  1R1L I;  2XN6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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