4C9EA

Mouse znrf3 ectodomain in complex with xenopus rspo2 fu1-fu2 (seleno met) crystal form ii
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
153
structure length
153
Chain Sequence
KETAFVEVVLFESSPSGDYTTHTTGLTGRFSRAGAMLSAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ligase/signaling protein
molecule keywords E3 UBIQUITIN-PROTEIN LIGASE ZNRF3
publication title Structural and Molecular Basis of Znrf3/Rnf43 Transmembrane Ubiquitin Ligase Inhibition by the Wnt Agonist R-Spondin.
pubmed doi rcsb
source organism Mus musculus
total genus 37
structure length 153
sequence length 153
chains with identical sequence C, E, G
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2013-10-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF18212 ZNRF_3_ecto ZNRF-3 Ectodomain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.50.30.30 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Glucose Oxidase; domain 1 4c9eA00
1Y9ZA 4C9EA 3VTAA 3ICUA 4C9VA 5IB9A 4TJXA 2C6CA 3RBUA 4C8CA 4KNGE 4OC4A 5ELYA 4C86A 4TWEA 4NGSA 3BI1A 4NGTA 4C84A 4OC5A 4CDKA 2XEJA 4C8UA 3IWWA 4C9AA 2OOTA 3D7GA 3FF3A 3SJEA 3IIBA 2OR4A 2CIJA 4C8TA 4MCSA 3FEEA 4OC3A 3BXMA 4NGMA 3SJFA 4YN3A 4OC1A 4P4JA 2JBKA 4P4BA 2XEFA 3BHXA 3S9NA 4TJVA 4NGQA 4W9YA 2PVWA 4LQGA 4C8PA 4C9UA 4X3RA 2C6PA 1CX8A 1XF1A 3D7HA 3I6SA 2XEGA 3D7FA 1DE4C 3D7DA 4OC0A 4P4EA 1V6CA 3SJXA 1WVMA 2XEIA 2PVVA 4C99A 2EK9A 4P4DA 4OC2A 3S9LA 3S9MA 4C8FA 4C9RA 3FECA 4MCPA 4P45A 3BI0A 4MCQA 4CDJA 2JBJA 5D29A 4MCRA 3EIFA 3I74A 4P4IA 4NGPA 4OMEA 3SJGA 4C85A 4C8AA 1Z8LA 2EK8A 5F09A 4P4FA 2C6GA 4JZ0A 4NGNA 4NGRA 4JYWA 3FEDA 4P44A 3KASA
chains in the Genus database with same CATH superfamily
1Y9ZA 1M6VB 4C9EA 3VTAA 1Q5XA 1NBWA 4H1HA 1CE8B 1ZRSA 1KBLA 3TLAA 3ICUA 4C9VA 5IB9A 4TJXA 2C6CA 1EZBA 1JDBC 3U1BA 3RBUA 4C8CA 1T36B 4KNGE 4OC4A 1DIKA 5ELYA 4C86A 3TLGB 4TWEA 3T07A 4NGSA 3EZBA 3BI1A 2GP4A 4NGTA 5F1YA 4C84A 5F9MA 4CO9A 4E94A 4OC5A 2X0SA 5FD8A 4CDKA 2XEJA 4C8UA 3IWWA 1BXRB 4C9AA 4CZ1A 2OOTA 3D7GA 3FF3A 3SJEA 1VBHA 3IIBA 2OR4A 2CIJA 4J0NA 3TLCA 4C8TA 1KEEB 4MCSA 4COGA 4M8DA 3FEEA 3NOJA 4OC3A 3BXMA 4NGMA 3SJFA 2YJVA 4YN3A 4JVOA 1JDEA 4E5SA 3EZAA 4OC1A 4P4JA 1C3OB 2JBKA 2D0PA 4P4BA 2PCNA 2XEFA 3BHXA 1ZL0A 3T05A 3S9NA 2DIKA 2EZBA 4IIYA 4TJVA 4NGQA 2HROA 4W9YA 3KRVA 2PVWA 4LQGA 3G23A 1J3LA 4C8PA 4C9UA 3K4IA 3K9TA 2MP0A 1GGOA 4X3RA 2C6PA 2C5QA 2B0AA 1CX8A 3TLBA 5JVLA 1NXJA 1XF1A 3D7HA 1VBGA 3I6SA 2XEGA 4INJA 3GJZA 3D7FA 5F5XA 1DE4C 1R61A 3D7DA 4OC0A 2HWGA 4P4EA 4MJXA 1V6CA 3SJXA 3T0TA 1WVMA 2E28A 2EZCA 2XEIA 2HI6A 1A9XB 2PVVA 4C99A 2EK9A 3EZEA 4P4DA 1VI4A 5IR2A 4OC2A 3TLEA 3C8OA 2AUNA 3S9LA 3S9MA 4C8FA 4COBA 2R82A 4C9RA 2AUMA 3FECA 4MCPA 4P45A 4IIXA 3BI0A 4MCQA 4CDJA 1CS0B 2JBJA 3TLGA 3T5MA 5D29A 4MCRA 3EIFA 3I74A 4P4IA 2OLSA 4NGPA 4OMEA 3SJGA 1C30B 4C8AA 4C85A 4EYSA 1ZYMA 1Z8LA 2EK8A 1EZAA 5F09A 4P4FA 2EZAA 3TLYA 4MI1A 2C6GA 2D0OA 4JZ0A 3TLZA 5JYBA 3TYXA 4NGNA 2FM4A 4NGRA 4JYWA 3FEDA 2YJTA 4P44A 1KC7A 5K99A 3SR3A 3KASA
chains in the Genus database with same CATH topology
1Y9ZA 4C9EA 3VTAA 3ICUA 4C9VA 5IB9A 4TJXA 2C6CA 3RBUA 4C8CA 4KNGE 4OC4A 5ELYA 4C86A 4TWEA 4NGSA 3BI1A 2GP4A 4NGTA 4C84A 4OC5A 4CDKA 2XEJA 4C8UA 3IWWA 4C9AA 2OOTA 3D7GA 3FF3A 3SJEA 3IIBA 2OR4A 2CIJA 4C8TA 4MCSA 3FEEA 4OC3A 3BXMA 4NGMA 3SJFA 4YN3A 4OC1A 4P4JA 2JBKA 4P4BA 2XEFA 3BHXA 3S9NA 4TJVA 4NGQA 4W9YA 2PVWA 4LQGA 4C8PA 4C9UA 3K9TA 4X3RA 2C6PA 2C5QA 1CX8A 1XF1A 3D7HA 3I6SA 2XEGA 3D7FA 1DE4C 3D7DA 4OC0A 4P4EA 1V6CA 3SJXA 1WVMA 2XEIA 2PVVA 4C99A 2EK9A 4P4DA 5IR2A 4OC2A 3S9LA 3S9MA 4C8FA 4C9RA 3FECA 4MCPA 4P45A 3BI0A 4MCQA 4CDJA 2JBJA 5D29A 4MCRA 3EIFA 3I74A 4P4IA 4NGPA 4OMEA 3SJGA 4C85A 4C8AA 1Z8LA 2EK8A 5F09A 4P4FA 2C6GA 4JZ0A 4NGNA 4NGRA 4JYWA 3FEDA 4P44A 3KASA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Y9Z A;  4C9E A;  3VTA A;  3ICU A;  4C9V A;  5IB9 A;  4TJX A;  2C6C A;  3RBU A;  4C8C A;  4KNG E;  4OC4 A;  5ELY A;  4C86 A;  4TWE A;  4NGS A;  3BI1 A;  4NGT A;  4C84 A;  4OC5 A;  4CDK A;  2XEJ A;  4C8U A;  3IWW A;  4C9A A;  2OOT A;  3D7G A;  3FF3 A;  3SJE A;  3IIB A;  2OR4 A;  2CIJ A;  4C8T A;  4MCS A;  3FEE A;  4OC3 A;  3BXM A;  4NGM A;  3SJF A;  4YN3 A;  4OC1 A;  4P4J A;  2JBK A;  4P4B A;  2XEF A;  3BHX A;  3S9N A;  4TJV A;  4NGQ A;  4W9Y A;  2PVW A;  4LQG A;  4C8P A;  4C9U A;  4X3R A;  2C6P A;  1CX8 A;  1XF1 A;  3D7H A;  3I6S A;  2XEG A;  3D7F A;  1DE4 C;  3D7D A;  4OC0 A;  4P4E A;  1V6C A;  3SJX A;  1WVM A;  2XEI A;  2PVV A;  4C99 A;  2EK9 A;  4P4D A;  4OC2 A;  3S9L A;  3S9M A;  4C8F A;  4C9R A;  3FEC A;  4MCP A;  4P45 A;  3BI0 A;  4MCQ A;  4CDJ A;  2JBJ A;  5D29 A;  4MCR A;  3EIF A;  3I74 A;  4P4I A;  4NGP A;  4OME A;  3SJG A;  4C85 A;  4C8A A;  1Z8L A;  2EK8 A;  5F09 A;  4P4F A;  2C6G A;  4JZ0 A;  4NGN A;  4NGR A;  4JYW A;  3FED A;  4P44 A;  3KAS A; 
#chains in the Genus database with same CATH topology
 1Y9Z A;  1M6V B;  4C9E A;  3VTA A;  1Q5X A;  1NBW A;  4H1H A;  1CE8 B;  1ZRS A;  1KBL A;  3TLA A;  3ICU A;  4C9V A;  5IB9 A;  4TJX A;  2C6C A;  1EZB A;  1JDB C;  3U1B A;  3RBU A;  4C8C A;  1T36 B;  4KNG E;  4OC4 A;  1DIK A;  5ELY A;  4C86 A;  3TLG B;  4TWE A;  3T07 A;  4NGS A;  3EZB A;  3BI1 A;  2GP4 A;  4NGT A;  5F1Y A;  4C84 A;  5F9M A;  4CO9 A;  4E94 A;  4OC5 A;  2X0S A;  5FD8 A;  4CDK A;  2XEJ A;  4C8U A;  3IWW A;  1BXR B;  4C9A A;  4CZ1 A;  2OOT A;  3D7G A;  3FF3 A;  3SJE A;  1VBH A;  3IIB A;  2OR4 A;  2CIJ A;  4J0N A;  3TLC A;  4C8T A;  1KEE B;  4MCS A;  4COG A;  4M8D A;  3FEE A;  3NOJ A;  4OC3 A;  3BXM A;  4NGM A;  3SJF A;  2YJV A;  4YN3 A;  4JVO A;  1JDE A;  4E5S A;  3EZA A;  4OC1 A;  4P4J A;  1C3O B;  2JBK A;  2D0P A;  4P4B A;  2PCN A;  2XEF A;  3BHX A;  1ZL0 A;  3T05 A;  3S9N A;  2DIK A;  2EZB A;  4IIY A;  4TJV A;  4NGQ A;  2HRO A;  4W9Y A;  3KRV A;  2PVW A;  4LQG A;  3G23 A;  1J3L A;  4C8P A;  4C9U A;  3K4I A;  3K9T A;  2MP0 A;  1GGO A;  4X3R A;  2C6P A;  2C5Q A;  2B0A A;  1CX8 A;  3TLB A;  5JVL A;  1NXJ A;  1XF1 A;  3D7H A;  1VBG A;  3I6S A;  2XEG A;  4INJ A;  3GJZ A;  3D7F A;  5F5X A;  1DE4 C;  1R61 A;  3D7D A;  4OC0 A;  2HWG A;  4P4E A;  4MJX A;  1V6C A;  3SJX A;  3T0T A;  1WVM A;  2E28 A;  2EZC A;  2XEI A;  2HI6 A;  1A9X B;  2PVV A;  4C99 A;  2EK9 A;  3EZE A;  4P4D A;  1VI4 A;  5IR2 A;  4OC2 A;  3TLE A;  3C8O A;  2AUN A;  3S9L A;  3S9M A;  4C8F A;  4COB A;  2R82 A;  4C9R A;  2AUM A;  3FEC A;  4MCP A;  4P45 A;  4IIX A;  3BI0 A;  4MCQ A;  4CDJ A;  1CS0 B;  2JBJ A;  3TLG A;  3T5M A;  5D29 A;  4MCR A;  3EIF A;  3I74 A;  4P4I A;  2OLS A;  4NGP A;  4OME A;  3SJG A;  1C30 B;  4C8A A;  4C85 A;  4EYS A;  1ZYM A;  1Z8L A;  2EK8 A;  1EZA A;  5F09 A;  4P4F A;  2EZA A;  3TLY A;  4MI1 A;  2C6G A;  2D0O A;  4JZ0 A;  3TLZ A;  5JYB A;  3TYX A;  4NGN A;  2FM4 A;  4NGR A;  4JYW A;  3FED A;  2YJT A;  4P44 A;  1KC7 A;  5K99 A;  3SR3 A;  3KAS A; 
#chains in the Genus database with same CATH homology
 1Y9Z A;  4C9E A;  3VTA A;  3ICU A;  4C9V A;  5IB9 A;  4TJX A;  2C6C A;  3RBU A;  4C8C A;  4KNG E;  4OC4 A;  5ELY A;  4C86 A;  4TWE A;  4NGS A;  3BI1 A;  2GP4 A;  4NGT A;  4C84 A;  4OC5 A;  4CDK A;  2XEJ A;  4C8U A;  3IWW A;  4C9A A;  2OOT A;  3D7G A;  3FF3 A;  3SJE A;  3IIB A;  2OR4 A;  2CIJ A;  4C8T A;  4MCS A;  3FEE A;  4OC3 A;  3BXM A;  4NGM A;  3SJF A;  4YN3 A;  4OC1 A;  4P4J A;  2JBK A;  4P4B A;  2XEF A;  3BHX A;  3S9N A;  4TJV A;  4NGQ A;  4W9Y A;  2PVW A;  4LQG A;  4C8P A;  4C9U A;  3K9T A;  4X3R A;  2C6P A;  2C5Q A;  1CX8 A;  1XF1 A;  3D7H A;  3I6S A;  2XEG A;  3D7F A;  1DE4 C;  3D7D A;  4OC0 A;  4P4E A;  1V6C A;  3SJX A;  1WVM A;  2XEI A;  2PVV A;  4C99 A;  2EK9 A;  4P4D A;  5IR2 A;  4OC2 A;  3S9L A;  3S9M A;  4C8F A;  4C9R A;  3FEC A;  4MCP A;  4P45 A;  3BI0 A;  4MCQ A;  4CDJ A;  2JBJ A;  5D29 A;  4MCR A;  3EIF A;  3I74 A;  4P4I A;  4NGP A;  4OME A;  3SJG A;  4C85 A;  4C8A A;  1Z8L A;  2EK8 A;  5F09 A;  4P4F A;  2C6G A;  4JZ0 A;  4NGN A;  4NGR A;  4JYW A;  3FED A;  4P44 A;  3KAS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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