4FAVC

Crystal structure of wt maug in complex with pre-methylamine dehydrogenase aged 50 days
Total Genus 31
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
125
structure length
124
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/electron transport
molecule keywords Methylamine utilization protein MauG
publication title Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
pubmed doi rcsb
source organism Paracoccus denitrificans
total genus 31
structure length 124
sequence length 125
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2012-05-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 4favC00
2OK4D 2I0SD 4FB1C 3C75L 2H3XB 3RN1C 3L4MC 2AGLD 3PXWC 3L4OC 2AH0D 4L1QC 2HXCD 2IAAB 4FA5C 4K3IC 2AGWD 2MADL 2I0TD 2OK6D 3PXSC 2J57K 4FA1C 2HKMD 2MTAL 3ORVC 3PXTC 1MG2B 2AGXD 2Q7QD 2AH1D 2HKRD 3SJLC 3SXTC 2IUPD 3SWSC 2HJ4D 4O1QC 2OJYD 2AGYD 2GC7B 2H47B 4FA9C 1MG3B 4L3GC 2IUQD 1MDAL 2IUVD 2IURD 1MAFL 3RN0C 3SLEC 3SVWC 2J55L 2HJBD 2J56L 1MAEL 2OIZD 2I0RD 4FAVC 3RLMC 4FA4C 4Y5RC 3RMZC 2BBKL 4L3HC 2AGZD 4FANC 2GC4B
chains in the Genus database with same CATH superfamily
2OK4D 2I0SD 4FB1C 3C75L 2H3XB 3RN1C 3L4MC 2AGLD 3PXWC 3L4OC 2AH0D 4L1QC 2HXCD 2IAAB 4FA5C 4K3IC 2AGWD 2MADL 2I0TD 2OK6D 3PXSC 2J57K 4FA1C 2HKMD 2MTAL 3ORVC 3PXTC 1MG2B 2AGXD 2Q7QD 2AH1D 2HKRD 3SJLC 3SXTC 2IUPD 3SWSC 2HJ4D 4O1QC 2OJYD 2AGYD 2GC7B 2H47B 4FA9C 1MG3B 4L3GC 2IUQD 1MDAL 2IUVD 2IURD 1MAFL 3RN0C 3SLEC 3SVWC 2J55L 2HJBD 2J56L 1MAEL 2OIZD 2I0RD 4FAVC 3RLMC 4FA4C 4Y5RC 3RMZC 2BBKL 4L3HC 2AGZD 4FANC 2GC4B
chains in the Genus database with same CATH topology
2OK4D 2I0SD 4FB1C 3C75L 2H3XB 3RN1C 3L4MC 2AGLD 3PXWC 3L4OC 2AH0D 4L1QC 2HXCD 2IAAB 4FA5C 4K3IC 2AGWD 2MADL 2I0TD 2OK6D 3PXSC 2J57K 4FA1C 2HKMD 2MTAL 3ORVC 3PXTC 1MG2B 2AGXD 2Q7QD 2AH1D 2HKRD 3SJLC 3SXTC 2IUPD 3SWSC 2HJ4D 4O1QC 2OJYD 2AGYD 2GC7B 2H47B 4FA9C 1MG3B 4L3GC 2IUQD 1MDAL 2IUVD 2IURD 1MAFL 3RN0C 3SLEC 3SVWC 2J55L 2HJBD 2J56L 1MAEL 2OIZD 2I0RD 4FAVC 3RLMC 4FA4C 4Y5RC 3RMZC 2BBKL 4L3HC 2AGZD 4FANC 2GC4B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2OK4 D;  2I0S D;  4FB1 C;  3C75 L;  2H3X B;  3RN1 C;  3L4M C;  2AGL D;  3PXW C;  3L4O C;  2AH0 D;  4L1Q C;  2HXC D;  2IAA B;  4FA5 C;  4K3I C;  2AGW D;  2MAD L;  2I0T D;  2OK6 D;  3PXS C;  2J57 K;  4FA1 C;  2HKM D;  2MTA L;  3ORV C;  3PXT C;  1MG2 B;  2AGX D;  2Q7Q D;  2AH1 D;  2HKR D;  3SJL C;  3SXT C;  2IUP D;  3SWS C;  2HJ4 D;  4O1Q C;  2OJY D;  2AGY D;  2GC7 B;  2H47 B;  4FA9 C;  1MG3 B;  4L3G C;  2IUQ D;  1MDA L;  2IUV D;  2IUR D;  1MAF L;  3RN0 C;  3SLE C;  3SVW C;  2J55 L;  2HJB D;  2J56 L;  1MAE L;  2OIZ D;  2I0R D;  4FAV C;  3RLM C;  4FA4 C;  4Y5R C;  3RMZ C;  2BBK L;  4L3H C;  2AGZ D;  4FAN C;  2GC4 B; 
#chains in the Genus database with same CATH topology
 2OK4 D;  2I0S D;  4FB1 C;  3C75 L;  2H3X B;  3RN1 C;  3L4M C;  2AGL D;  3PXW C;  3L4O C;  2AH0 D;  4L1Q C;  2HXC D;  2IAA B;  4FA5 C;  4K3I C;  2AGW D;  2MAD L;  2I0T D;  2OK6 D;  3PXS C;  2J57 K;  4FA1 C;  2HKM D;  2MTA L;  3ORV C;  3PXT C;  1MG2 B;  2AGX D;  2Q7Q D;  2AH1 D;  2HKR D;  3SJL C;  3SXT C;  2IUP D;  3SWS C;  2HJ4 D;  4O1Q C;  2OJY D;  2AGY D;  2GC7 B;  2H47 B;  4FA9 C;  1MG3 B;  4L3G C;  2IUQ D;  1MDA L;  2IUV D;  2IUR D;  1MAF L;  3RN0 C;  3SLE C;  3SVW C;  2J55 L;  2HJB D;  2J56 L;  1MAE L;  2OIZ D;  2I0R D;  4FAV C;  3RLM C;  4FA4 C;  4Y5R C;  3RMZ C;  2BBK L;  4L3H C;  2AGZ D;  4FAN C;  2GC4 B; 
#chains in the Genus database with same CATH homology
 2OK4 D;  2I0S D;  4FB1 C;  3C75 L;  2H3X B;  3RN1 C;  3L4M C;  2AGL D;  3PXW C;  3L4O C;  2AH0 D;  4L1Q C;  2HXC D;  2IAA B;  4FA5 C;  4K3I C;  2AGW D;  2MAD L;  2I0T D;  2OK6 D;  3PXS C;  2J57 K;  4FA1 C;  2HKM D;  2MTA L;  3ORV C;  3PXT C;  1MG2 B;  2AGX D;  2Q7Q D;  2AH1 D;  2HKR D;  3SJL C;  3SXT C;  2IUP D;  3SWS C;  2HJ4 D;  4O1Q C;  2OJY D;  2AGY D;  2GC7 B;  2H47 B;  4FA9 C;  1MG3 B;  4L3G C;  2IUQ D;  1MDA L;  2IUV D;  2IUR D;  1MAF L;  3RN0 C;  3SLE C;  3SVW C;  2J55 L;  2HJB D;  2J56 L;  1MAE L;  2OIZ D;  2I0R D;  4FAV C;  3RLM C;  4FA4 C;  4Y5R C;  3RMZ C;  2BBK L;  4L3H C;  2AGZ D;  4FAN C;  2GC4 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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