4IU1A

Crystal structure of leishmania mexicana arginase in complex with inhibitor nor-noha
Total Genus 118
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
118
sequence length
310
structure length
310
Chain Sequence
KKMSIVLAPFSGGQPHSGVELGPDYLLKQGLQQDMEKLGWDTRLERVFDGKVVEARKASDNGDRIGRVKRPRLTAECTEKIYKCVRRVAEQGRFPLTIGGDHSIALGTVAGVLSVHPDAGVIWVDAHADINTMSGTVSGNLHGCPLSILLGLDRENIPECFSWVPQVLKPNKIAYIGLRAVDDEEKKILHDLNIAAFSMHHVDRYGIDKVVSMAIEAVSPKGTEPVMVSYDVDTIDPLYVPATGTPVRGGLSFREALFLCERIAECGRLVALDVVECNPLLAATESHVNDTISVGCAIARCMMGETLLYT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Arginase
publication title Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
pubmed doi rcsb
source organism Leishmania mexicana
total genus 118
structure length 310
sequence length 310
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2013-01-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4iu1A00
1WVAA 1R1OA 4IXUA 3CEVA 4Q3PA 4Q3RC 3LHLA 1P8MA 3MMRA 4DZ4A 1RLAA 4Q3TA 3NIQA 1TBHA 1T5GA 4RHMA 3TF3A 3SL1A 4RHKA 4FCKA 3RLAA 1P8QA 3F80A 2RLAA 4G3HA 4Q3QA 1GQ7A 3TH7A 1T4TA 4Q42A 5RLAA 1WVBA 4Q3RA 3GMZA 4RHLA 4IU1A 1HQ5A 2ZAVA 4I06A 2EF4A 3GN0A 4Q3UA 2AEBA 1P8OA 3NIPA 4MYFA 1TBLA 4GSZA 2CEVA 3M1RA 3MFWA 3E9BA 4RLAA 4IU5A 4Q3SA 1XFKA 4HZEA 2PLLA 4Q3VA 1T4PA 5CEVA 4IXVA 3E6KA 1P8PA 3SJTA 1TBJA 4GWDA 4IE2A 3NIOA 3THHA 3E8ZA 4HWWA 3E6VA 4CEVA 1CEVA 1P8RA 4RHJA 4GSVA 1P8NA 2A0MA 3LP7A 1T4SA 1T4RA 4Q40A 4IU4A 1HQHA 1D3VA 2PHAA 4IE1A 4MYLA 1HQFA 2EIVA 4MYNA 1HQXA 1T5FA 3MFVA 5HJAA 3MJLA 3SKKA 4Q41A 1WOHA 2EF5A 1ZPEA 1P8SA 4IE3A 1PQ3A 3THEA 3THJA 1TA1A 5HJ9A 3E8QA 4RHIA 4ITYA 1HQGA 4IU0A 4MXRA 1ZPGA 3SL0A 3PZLA 4FCIA 4GWCA 4RHQA 3KV2A 3LP4A 1WOIA 4MYKA 4GSMA 4HXQA 1GQ6A 1WOGA 2PHOA 3DJ8A
chains in the Genus database with same CATH superfamily
1WVAA 1R1OA 4RN0A 4IXUA 5THUA 5G13A 3EZTA 4QA5A 1T67A 3CEVA 4Q3PA 1T64A 4Q3RC 3LHLA 1P8MA 3MMRA 4ZUMA 5G0JA 4CBTA 4DZ4A 5EFKB 5FUEA 1RLAA 5DC7A 1ZZ0A 4Q3TA 4QA2A 5G10A 3NIQA 1TBHA 1T5GA 4RHMA 3F0RA 2V5WA 3TF3A 1VKGA 3SL1A 2VQVA 4RHKA 1ZZ3A 4A69A 5EEKA 3C0YA 4FCKA 3RLAA 4LY1A 1P8QA 3F80A 5THSA 2RLAA 4BZ7A 3Q9BA 4G3HA 4QA7A 4Q3QA 1GQ7A 3MENA 3TH7A 5G0IA 1T4TA 5DC8A 4Q42A 1ZZ1A 5EF8A 5RLAA 5THTA 1WVBA 5DC5A 4ZUOA 1W22A 4Q3RA 3GMZA 4RHLA 4ZUNA 4IU1A 1HQ5A 4QA6A 2VCGA 2VQQA 5DC6A 2ZAVA 3MZ6A 4I06A 2EF4A 3RQDA 3GN0A 3C0ZA 4Q3UA 1C3SA 2AEBA 1P8OA 3Q9CA 5EEIA 5IWGA 3NIPA 4MYFA 1TBLA 4GSZA 2CEVA 3M1RA 3SFFA 3MFWA 4ZUQA 4CBYA 5G17A 3E9BA 4RLAA 4IU5A 4Q3SA 5FCWA 1XFKA 4ZUPA 1T69A 4HZEA 5EFBD 2PLLA 4Q3VA 5G1CA 1T4PA 3MZ3A 3Q9EA 5G0GA 5CEVA 4IXVA 5EEFA 3Q9FA 3E6KA 1P8PA 5EF7A 3SJTA 4BZ9A 4RN1A 1TBJA 4GWDA 4IE2A 2V5XA 3NIOA 4RN2A 5G0XA 3THHA 2VQWG 3E8ZA 5A2SA 5D1BA 4HWWA 5EENA 5G12A 3E6VA 4CEVA 1CEVA 1P8RA 4RHJA 4GSVA 1P8NA 2A0MA 5JI5A 3LP7A 1T4SA 4BZ5A 3F06A 5IX0A 1T4RA 4Q40A 3F07A 4QA4A 4IU4A 5G1BA 5G3WA 1HQHA 1D3VA 2PHAA 4IE1A 3SFHA 4MYLA 1HQFA 4CQFA 2EIVA 4MYNA 1HQXA 1T5FA 5G1AA 4QA3A 5BWZA 3MFVA 1C3PA 4BZ6A 4ZURA 5D1DA 3C10A 5HJAA 2GH6A 3MJLA 3EW8A 4LXZA 5G0HA 3SKKA 4Q41A 5LI3A 1WOHA 2EF5A 1ZPEA 5THVA 5ICNB 1P8SA 3MZ4A 2VQJA 5EFHA 1C3RA 3ZNSA 4IE3A 1PQ3A 3THEA 3THJA 1TA1A 5EFGA 5HJ9A 3E8QA 3EWFA 4RHIA 4ITYA 1HQGA 4IU0A 2VQMA 4MXRA 1ZPGA 5EEMA 3SL0A 3MZ7A 2VQOA 3PZLA 4FCIA 4GWCA 4RHQA 3ZNRA 3KV2A 3LP4A 3EZPA 4QA1A 4BKXB 5G0YA 3MAXA 5EFNA 1WOIA 4MYKA 5EFJD 4GSMA 4QA0A 4HXQA 4BZ8A 5G11A 1GQ6A 1WOGA 5D1CA 2PHOA 3DJ8A
chains in the Genus database with same CATH topology
1WVAA 1R1OA 4IXUA 3CEVA 4Q3PA 4Q3RC 3LHLA 1P8MA 3MMRA 4DZ4A 1RLAA 4Q3TA 3NIQA 1TBHA 1T5GA 4RHMA 3TF3A 3SL1A 4RHKA 4FCKA 3RLAA 1P8QA 3F80A 2RLAA 4G3HA 4Q3QA 1GQ7A 3TH7A 1T4TA 4Q42A 5RLAA 1WVBA 4Q3RA 3GMZA 4RHLA 4IU1A 1HQ5A 2ZAVA 4I06A 2EF4A 3GN0A 4Q3UA 2AEBA 1P8OA 3NIPA 4MYFA 1TBLA 4GSZA 2CEVA 3M1RA 3MFWA 3E9BA 4RLAA 4IU5A 4Q3SA 1XFKA 4HZEA 2PLLA 4Q3VA 1T4PA 5CEVA 4IXVA 3E6KA 1P8PA 3SJTA 1TBJA 4GWDA 4IE2A 3NIOA 3THHA 3E8ZA 4HWWA 3E6VA 4CEVA 1CEVA 1P8RA 4RHJA 4GSVA 1P8NA 2A0MA 3LP7A 1T4SA 1T4RA 4Q40A 4IU4A 1HQHA 1D3VA 2PHAA 4IE1A 4MYLA 1HQFA 2EIVA 4MYNA 1HQXA 1T5FA 3MFVA 5HJAA 3MJLA 3SKKA 4Q41A 1WOHA 2EF5A 1ZPEA 1P8SA 4IE3A 1PQ3A 3THEA 3THJA 1TA1A 5HJ9A 3E8QA 4RHIA 4ITYA 1HQGA 4IU0A 4MXRA 1ZPGA 3SL0A 3PZLA 4FCIA 4GWCA 4RHQA 3KV2A 3LP4A 1WOIA 4MYKA 4GSMA 4HXQA 1GQ6A 1WOGA 2PHOA 3DJ8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WVA A;  1R1O A;  4IXU A;  3CEV A;  4Q3P A;  4Q3R C;  3LHL A;  1P8M A;  3MMR A;  4DZ4 A;  1RLA A;  4Q3T A;  3NIQ A;  1TBH A;  1T5G A;  4RHM A;  3TF3 A;  3SL1 A;  4RHK A;  4FCK A;  3RLA A;  1P8Q A;  3F80 A;  2RLA A;  4G3H A;  4Q3Q A;  1GQ7 A;  3TH7 A;  1T4T A;  4Q42 A;  5RLA A;  1WVB A;  4Q3R A;  3GMZ A;  4RHL A;  4IU1 A;  1HQ5 A;  2ZAV A;  4I06 A;  2EF4 A;  3GN0 A;  4Q3U A;  2AEB A;  1P8O A;  3NIP A;  4MYF A;  1TBL A;  4GSZ A;  2CEV A;  3M1R A;  3MFW A;  3E9B A;  4RLA A;  4IU5 A;  4Q3S A;  1XFK A;  4HZE A;  2PLL A;  4Q3V A;  1T4P A;  5CEV A;  4IXV A;  3E6K A;  1P8P A;  3SJT A;  1TBJ A;  4GWD A;  4IE2 A;  3NIO A;  3THH A;  3E8Z A;  4HWW A;  3E6V A;  4CEV A;  1CEV A;  1P8R A;  4RHJ A;  4GSV A;  1P8N A;  2A0M A;  3LP7 A;  1T4S A;  1T4R A;  4Q40 A;  4IU4 A;  1HQH A;  1D3V A;  2PHA A;  4IE1 A;  4MYL A;  1HQF A;  2EIV A;  4MYN A;  1HQX A;  1T5F A;  3MFV A;  5HJA A;  3MJL A;  3SKK A;  4Q41 A;  1WOH A;  2EF5 A;  1ZPE A;  1P8S A;  4IE3 A;  1PQ3 A;  3THE A;  3THJ A;  1TA1 A;  5HJ9 A;  3E8Q A;  4RHI A;  4ITY A;  1HQG A;  4IU0 A;  4MXR A;  1ZPG A;  3SL0 A;  3PZL A;  4FCI A;  4GWC A;  4RHQ A;  3KV2 A;  3LP4 A;  1WOI A;  4MYK A;  4GSM A;  4HXQ A;  1GQ6 A;  1WOG A;  2PHO A;  3DJ8 A; 
#chains in the Genus database with same CATH topology
 1WVA A;  1R1O A;  4RN0 A;  4IXU A;  5THU A;  5G13 A;  3EZT A;  4QA5 A;  1T67 A;  3CEV A;  4Q3P A;  1T64 A;  4Q3R C;  3LHL A;  1P8M A;  3MMR A;  4ZUM A;  5G0J A;  4CBT A;  4DZ4 A;  5EFK B;  5FUE A;  1RLA A;  5DC7 A;  1ZZ0 A;  4Q3T A;  4QA2 A;  5G10 A;  3NIQ A;  1TBH A;  1T5G A;  4RHM A;  3F0R A;  2V5W A;  3TF3 A;  1VKG A;  3SL1 A;  2VQV A;  4RHK A;  1ZZ3 A;  4A69 A;  5EEK A;  3C0Y A;  4FCK A;  3RLA A;  4LY1 A;  1P8Q A;  3F80 A;  5THS A;  2RLA A;  4BZ7 A;  3Q9B A;  4G3H A;  4QA7 A;  4Q3Q A;  1GQ7 A;  3MEN A;  3TH7 A;  5G0I A;  1T4T A;  5DC8 A;  4Q42 A;  1ZZ1 A;  5EF8 A;  5RLA A;  5THT A;  1WVB A;  5DC5 A;  4ZUO A;  1W22 A;  4Q3R A;  3GMZ A;  4RHL A;  4ZUN A;  4IU1 A;  1HQ5 A;  4QA6 A;  2VCG A;  2VQQ A;  5DC6 A;  2ZAV A;  3MZ6 A;  4I06 A;  2EF4 A;  3RQD A;  3GN0 A;  3C0Z A;  4Q3U A;  1C3S A;  2AEB A;  1P8O A;  3Q9C A;  5EEI A;  5IWG A;  3NIP A;  4MYF A;  1TBL A;  4GSZ A;  2CEV A;  3M1R A;  3SFF A;  3MFW A;  4ZUQ A;  4CBY A;  5G17 A;  3E9B A;  4RLA A;  4IU5 A;  4Q3S A;  5FCW A;  1XFK A;  4ZUP A;  1T69 A;  4HZE A;  5EFB D;  2PLL A;  4Q3V A;  5G1C A;  1T4P A;  3MZ3 A;  3Q9E A;  5G0G A;  5CEV A;  4IXV A;  5EEF A;  3Q9F A;  3E6K A;  1P8P A;  5EF7 A;  3SJT A;  4BZ9 A;  4RN1 A;  1TBJ A;  4GWD A;  4IE2 A;  2V5X A;  3NIO A;  4RN2 A;  5G0X A;  3THH A;  2VQW G;  3E8Z A;  5A2S A;  5D1B A;  4HWW A;  5EEN A;  5G12 A;  3E6V A;  4CEV A;  1CEV A;  1P8R A;  4RHJ A;  4GSV A;  1P8N A;  2A0M A;  5JI5 A;  3LP7 A;  1T4S A;  4BZ5 A;  3F06 A;  5IX0 A;  1T4R A;  4Q40 A;  3F07 A;  4QA4 A;  4IU4 A;  5G1B A;  5G3W A;  1HQH A;  1D3V A;  2PHA A;  4IE1 A;  3SFH A;  4MYL A;  1HQF A;  4CQF A;  2EIV A;  4MYN A;  1HQX A;  1T5F A;  5G1A A;  4QA3 A;  5BWZ A;  3MFV A;  1C3P A;  4BZ6 A;  4ZUR A;  5D1D A;  3C10 A;  5HJA A;  2GH6 A;  3MJL A;  3EW8 A;  4LXZ A;  5G0H A;  3SKK A;  4Q41 A;  5LI3 A;  1WOH A;  2EF5 A;  1ZPE A;  5THV A;  5ICN B;  1P8S A;  3MZ4 A;  2VQJ A;  5EFH A;  1C3R A;  3ZNS A;  4IE3 A;  1PQ3 A;  3THE A;  3THJ A;  1TA1 A;  5EFG A;  5HJ9 A;  3E8Q A;  3EWF A;  4RHI A;  4ITY A;  1HQG A;  4IU0 A;  2VQM A;  4MXR A;  1ZPG A;  5EEM A;  3SL0 A;  3MZ7 A;  2VQO A;  3PZL A;  4FCI A;  4GWC A;  4RHQ A;  3ZNR A;  3KV2 A;  3LP4 A;  3EZP A;  4QA1 A;  4BKX B;  5G0Y A;  3MAX A;  5EFN A;  1WOI A;  4MYK A;  5EFJ D;  4GSM A;  4QA0 A;  4HXQ A;  4BZ8 A;  5G11 A;  1GQ6 A;  1WOG A;  5D1C A;  2PHO A;  3DJ8 A; 
#chains in the Genus database with same CATH homology
 1WVA A;  1R1O A;  4IXU A;  3CEV A;  4Q3P A;  4Q3R C;  3LHL A;  1P8M A;  3MMR A;  4DZ4 A;  1RLA A;  4Q3T A;  3NIQ A;  1TBH A;  1T5G A;  4RHM A;  3TF3 A;  3SL1 A;  4RHK A;  4FCK A;  3RLA A;  1P8Q A;  3F80 A;  2RLA A;  4G3H A;  4Q3Q A;  1GQ7 A;  3TH7 A;  1T4T A;  4Q42 A;  5RLA A;  1WVB A;  4Q3R A;  3GMZ A;  4RHL A;  4IU1 A;  1HQ5 A;  2ZAV A;  4I06 A;  2EF4 A;  3GN0 A;  4Q3U A;  2AEB A;  1P8O A;  3NIP A;  4MYF A;  1TBL A;  4GSZ A;  2CEV A;  3M1R A;  3MFW A;  3E9B A;  4RLA A;  4IU5 A;  4Q3S A;  1XFK A;  4HZE A;  2PLL A;  4Q3V A;  1T4P A;  5CEV A;  4IXV A;  3E6K A;  1P8P A;  3SJT A;  1TBJ A;  4GWD A;  4IE2 A;  3NIO A;  3THH A;  3E8Z A;  4HWW A;  3E6V A;  4CEV A;  1CEV A;  1P8R A;  4RHJ A;  4GSV A;  1P8N A;  2A0M A;  3LP7 A;  1T4S A;  1T4R A;  4Q40 A;  4IU4 A;  1HQH A;  1D3V A;  2PHA A;  4IE1 A;  4MYL A;  1HQF A;  2EIV A;  4MYN A;  1HQX A;  1T5F A;  3MFV A;  5HJA A;  3MJL A;  3SKK A;  4Q41 A;  1WOH A;  2EF5 A;  1ZPE A;  1P8S A;  4IE3 A;  1PQ3 A;  3THE A;  3THJ A;  1TA1 A;  5HJ9 A;  3E8Q A;  4RHI A;  4ITY A;  1HQG A;  4IU0 A;  4MXR A;  1ZPG A;  3SL0 A;  3PZL A;  4FCI A;  4GWC A;  4RHQ A;  3KV2 A;  3LP4 A;  1WOI A;  4MYK A;  4GSM A;  4HXQ A;  1GQ6 A;  1WOG A;  2PHO A;  3DJ8 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...