4IZ7B

Structure of non-phosphorylated erk2 bound to the pea-15 death effector domain
Total Genus 33
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
33
sequence length
90
structure length
90
Chain Sequence
GMAEYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Mitogen-activated protein kinase 1
publication title Structure of ERK2 bound to PEA-15 reveals a mechanism for rapid release of activated MAPK.
pubmed doi rcsb
source organism Homo sapiens
total genus 33
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2013-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF01335 DED Death effector domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 4iz7B00
4O9LA 4A2WA 2LS7A 2N7ZA 2A9IA 2N80A 2LWDA 4A2QA 4O6XA 4RHWA 3EZQA 4M9ZA 2LWEA 2N83A 2YVIA 2YQFA 3QF2A 4FH0A 1PN5A 1FADA 4M9XA 3EZQB 4D8OA 1DGNA 4QOBA 3MOPG 1ICHA 3YGSC 4NQKA 2DBDA 1NGRA 2MN4A 2M5VA 4F44A 2DBFA 1WMGA 2KN6A 2HM2Q 2N97A 3CRDA 2B1WA 2YGSA 3CL3A 1E3YA 3J63A 3T6PA 4IZ5E 3LQQA 2N00A 2MS7A 2DBGA 1DDFA 2MS8A 2MPCA 2L9MA 4E9MA 3MOPA 4JUPA 1CY5A 1A1WA 4P4HA 2DO9A 4O9FA 2O71A 3YGSP 4LWDA 4UZ0A 1A1ZA 2KM6A 4I16A 2NAQA 1E41A 4P4HI 2MB9A 1N3KA 2OF5A 2A5YB 1YGOA 2G7RA 1D2ZA 4DWNA 2P1HA 2N1FA 2BBZA 4IZAB 4F42A 2D96A 4JQWA 2DBHA 2BBRA 3KATA 3J6JA 3LQRA 1Z6TA 1UCPA 2NZ7A 4N1KA 2IB1A 2NSNA 1WXPA 2OF5H 4N1LA 4O7QA 4ZBWA 4N1JA 1CWWA 4IZ7B 2YU0A 2F1SA 4M9SA 4EWIA 4RHWE 2VGQA 1D2ZB 3MOPK 2GF5A 1C15A 2L6AA 1WH4A
chains in the Genus database with same CATH superfamily
4O9LA 4A2WA 2LS7A 2N7ZA 2A9IA 2N80A 2LWDA 4A2QA 4O6XA 4RHWA 3EZQA 4M9ZA 2LWEA 2N83A 2YVIA 2YQFA 3QF2A 4FH0A 1PN5A 1FADA 4M9XA 3EZQB 4D8OA 1DGNA 4QOBA 3MOPG 1ICHA 3YGSC 4NQKA 2DBDA 1NGRA 2MN4A 2M5VA 4F44A 2DBFA 1WMGA 2KN6A 2HM2Q 2N97A 3CRDA 2B1WA 2YGSA 3CL3A 1E3YA 3J63A 3T6PA 4IZ5E 3LQQA 2N00A 2MS7A 2DBGA 1DDFA 2MS8A 2MPCA 2L9MA 4E9MA 3MOPA 4JUPA 1CY5A 1A1WA 4P4HA 2DO9A 4O9FA 2O71A 3YGSP 4LWDA 4UZ0A 1A1ZA 2KM6A 4I16A 2NAQA 1E41A 4P4HI 2MB9A 1N3KA 2OF5A 2A5YB 1YGOA 2G7RA 1D2ZA 4DWNA 2P1HA 2N1FA 2BBZA 4IZAB 4F42A 2D96A 4JQWA 2DBHA 2BBRA 3KATA 2MJMA 3J6JA 3LQRA 1Z6TA 1UCPA 2NZ7A 2XV9A 4N1KA 2IB1A 2NSNA 1WXPA 2OF5H 4N1LA 4O7QA 4ZBWA 4N1JA 1CWWA 4IZ7B 2YU0A 2F1SA 4M9SA 4EWIA 4RHWE 2VGQA 1D2ZB 3MOPK 2GF5A 1C15A 2L6AA 1WH4A
chains in the Genus database with same CATH topology
4O9LA 4A2WA 2LS7A 2N7ZA 2A9IA 2N80A 2LWDA 4A2QA 4O6XA 4RHWA 3EZQA 4M9ZA 2LWEA 2N83A 2YVIA 2YQFA 3QF2A 4FH0A 1PN5A 1FADA 4M9XA 3EZQB 4D8OA 1DGNA 4QOBA 3MOPG 1ICHA 3YGSC 4NQKA 2DBDA 1NGRA 2MN4A 2M5VA 4F44A 2DBFA 1WMGA 2KN6A 2HM2Q 2N97A 3CRDA 2B1WA 2YGSA 3CL3A 1E3YA 3J63A 3T6PA 4IZ5E 3LQQA 2N00A 2MS7A 2DBGA 1DDFA 2MS8A 2MPCA 2L9MA 4E9MA 3MOPA 4JUPA 1CY5A 1A1WA 4P4HA 2DO9A 4O9FA 2O71A 3YGSP 4LWDA 4UZ0A 1A1ZA 2KM6A 4I16A 2NAQA 1E41A 4P4HI 2MB9A 1N3KA 2OF5A 2A5YB 1YGOA 2G7RA 1D2ZA 4DWNA 2P1HA 2N1FA 2BBZA 4IZAB 4F42A 2D96A 4JQWA 2DBHA 2BBRA 3KATA 2MJMA 3J6JA 3LQRA 1Z6TA 1UCPA 2NZ7A 2XV9A 4N1KA 2IB1A 2NSNA 1WXPA 2OF5H 4N1LA 4O7QA 4ZBWA 4N1JA 1CWWA 4IZ7B 2YU0A 2F1SA 4M9SA 4EWIA 4RHWE 2VGQA 1D2ZB 3MOPK 2GF5A 1C15A 2L6AA 1WH4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4O9L A;  4A2W A;  2LS7 A;  2N7Z A;  2A9I A;  2N80 A;  2LWD A;  4A2Q A;  4O6X A;  4RHW A;  3EZQ A;  4M9Z A;  2LWE A;  2N83 A;  2YVI A;  2YQF A;  3QF2 A;  4FH0 A;  1PN5 A;  1FAD A;  4M9X A;  3EZQ B;  4D8O A;  1DGN A;  4QOB A;  3MOP G;  1ICH A;  3YGS C;  4NQK A;  2DBD A;  1NGR A;  2MN4 A;  2M5V A;  4F44 A;  2DBF A;  1WMG A;  2KN6 A;  2HM2 Q;  2N97 A;  3CRD A;  2B1W A;  2YGS A;  3CL3 A;  1E3Y A;  3J63 A;  3T6P A;  4IZ5 E;  3LQQ A;  2N00 A;  2MS7 A;  2DBG A;  1DDF A;  2MS8 A;  2MPC A;  2L9M A;  4E9M A;  3MOP A;  4JUP A;  1CY5 A;  1A1W A;  4P4H A;  2DO9 A;  4O9F A;  2O71 A;  3YGS P;  4LWD A;  4UZ0 A;  1A1Z A;  2KM6 A;  4I16 A;  2NAQ A;  1E41 A;  4P4H I;  2MB9 A;  1N3K A;  2OF5 A;  2A5Y B;  1YGO A;  2G7R A;  1D2Z A;  4DWN A;  2P1H A;  2N1F A;  2BBZ A;  4IZA B;  4F42 A;  2D96 A;  4JQW A;  2DBH A;  2BBR A;  3KAT A;  3J6J A;  3LQR A;  1Z6T A;  1UCP A;  2NZ7 A;  4N1K A;  2IB1 A;  2NSN A;  1WXP A;  2OF5 H;  4N1L A;  4O7Q A;  4ZBW A;  4N1J A;  1CWW A;  4IZ7 B;  2YU0 A;  2F1S A;  4M9S A;  4EWI A;  4RHW E;  2VGQ A;  1D2Z B;  3MOP K;  2GF5 A;  1C15 A;  2L6A A;  1WH4 A; 
#chains in the Genus database with same CATH topology
 4O9L A;  4A2W A;  2LS7 A;  2N7Z A;  2A9I A;  2N80 A;  2LWD A;  4A2Q A;  4O6X A;  4RHW A;  3EZQ A;  4M9Z A;  2LWE A;  2N83 A;  2YVI A;  2YQF A;  3QF2 A;  4FH0 A;  1PN5 A;  1FAD A;  4M9X A;  3EZQ B;  4D8O A;  1DGN A;  4QOB A;  3MOP G;  1ICH A;  3YGS C;  4NQK A;  2DBD A;  1NGR A;  2MN4 A;  2M5V A;  4F44 A;  2DBF A;  1WMG A;  2KN6 A;  2HM2 Q;  2N97 A;  3CRD A;  2B1W A;  2YGS A;  3CL3 A;  1E3Y A;  3J63 A;  3T6P A;  4IZ5 E;  3LQQ A;  2N00 A;  2MS7 A;  2DBG A;  1DDF A;  2MS8 A;  2MPC A;  2L9M A;  4E9M A;  3MOP A;  4JUP A;  1CY5 A;  1A1W A;  4P4H A;  2DO9 A;  4O9F A;  2O71 A;  3YGS P;  4LWD A;  4UZ0 A;  1A1Z A;  2KM6 A;  4I16 A;  2NAQ A;  1E41 A;  4P4H I;  2MB9 A;  1N3K A;  2OF5 A;  2A5Y B;  1YGO A;  2G7R A;  1D2Z A;  4DWN A;  2P1H A;  2N1F A;  2BBZ A;  4IZA B;  4F42 A;  2D96 A;  4JQW A;  2DBH A;  2BBR A;  3KAT A;  2MJM A;  3J6J A;  3LQR A;  1Z6T A;  1UCP A;  2NZ7 A;  2XV9 A;  4N1K A;  2IB1 A;  2NSN A;  1WXP A;  2OF5 H;  4N1L A;  4O7Q A;  4ZBW A;  4N1J A;  1CWW A;  4IZ7 B;  2YU0 A;  2F1S A;  4M9S A;  4EWI A;  4RHW E;  2VGQ A;  1D2Z B;  3MOP K;  2GF5 A;  1C15 A;  2L6A A;  1WH4 A; 
#chains in the Genus database with same CATH homology
 4O9L A;  4A2W A;  2LS7 A;  2N7Z A;  2A9I A;  2N80 A;  2LWD A;  4A2Q A;  4O6X A;  4RHW A;  3EZQ A;  4M9Z A;  2LWE A;  2N83 A;  2YVI A;  2YQF A;  3QF2 A;  4FH0 A;  1PN5 A;  1FAD A;  4M9X A;  3EZQ B;  4D8O A;  1DGN A;  4QOB A;  3MOP G;  1ICH A;  3YGS C;  4NQK A;  2DBD A;  1NGR A;  2MN4 A;  2M5V A;  4F44 A;  2DBF A;  1WMG A;  2KN6 A;  2HM2 Q;  2N97 A;  3CRD A;  2B1W A;  2YGS A;  3CL3 A;  1E3Y A;  3J63 A;  3T6P A;  4IZ5 E;  3LQQ A;  2N00 A;  2MS7 A;  2DBG A;  1DDF A;  2MS8 A;  2MPC A;  2L9M A;  4E9M A;  3MOP A;  4JUP A;  1CY5 A;  1A1W A;  4P4H A;  2DO9 A;  4O9F A;  2O71 A;  3YGS P;  4LWD A;  4UZ0 A;  1A1Z A;  2KM6 A;  4I16 A;  2NAQ A;  1E41 A;  4P4H I;  2MB9 A;  1N3K A;  2OF5 A;  2A5Y B;  1YGO A;  2G7R A;  1D2Z A;  4DWN A;  2P1H A;  2N1F A;  2BBZ A;  4IZA B;  4F42 A;  2D96 A;  4JQW A;  2DBH A;  2BBR A;  3KAT A;  2MJM A;  3J6J A;  3LQR A;  1Z6T A;  1UCP A;  2NZ7 A;  2XV9 A;  4N1K A;  2IB1 A;  2NSN A;  1WXP A;  2OF5 H;  4N1L A;  4O7Q A;  4ZBW A;  4N1J A;  1CWW A;  4IZ7 B;  2YU0 A;  2F1S A;  4M9S A;  4EWI A;  4RHW E;  2VGQ A;  1D2Z B;  3MOP K;  2GF5 A;  1C15 A;  2L6A A;  1WH4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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