4J5QA

Targ1 (c6orf130), terminal adp-ribose glycohydrolase 1, apo structure
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
146
structure length
146
Chain Sequence
EDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKRASHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords O-acetyl-ADP-ribose deacetylase 1
publication title Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease.
pubmed doi rcsb
source organism Homo sapiens
total genus 48
structure length 146
sequence length 146
ec nomenclature ec 3.5.1.-:
pdb deposition date 2013-02-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 4j5qA01
4ZX8A 1GYTA 4GVWA 4JLLA 3JRUA 1VHUA 5DUSA 3SIHA 3EJGA 3PEIA 4K0CA 3V2BA 5AILA 2ACFA 1TY8A 5CBMA 1TXZA 5FSYA 3SIIA 3EWPA 3EW5A 3ETIA 4X2TA 3EJFA 4GVVA 3GQOA 4ESSA 4JGKA 4KSIA 5D8NA 5FSUA 2VRIA 3VFQA 4J5QA 2XD7A 3IIDA 3Q6ZA 3KR4A 1LAMA 2FG1A 2BFRA 1LAPA 4J4ZA 4ABKA 4R76A 3T8WA 1SPVA 3H8GA 4R6TA 3GPGA 1LCPA 4ZI6A 5FSZA 1ZR5A 3KR5A 2DX6A 1ZR3A 3EWOA 4JCAA 3GPOA 2BFQA 2J9AA 3H8EA 4ZY2A 5CB3A 3GQEA 4ZY0A 3Q71A 5HIHA 5HOLA 2AFCA 3SIJA 3EWQA 1HJZA 3KQXA 1NJRA 2L8RA 4JVVA 3V45A 5FSXA 4KYBA 3EKEA 4D86A 4TU0A 2EEEA 5E3BA 4K3NA 4UMLA 3JZTA 2LGRA 3GPQA 2EWBA 4J5SA 2FAVA 3KZWA 3EWRA 3SIGA 4J5RA 4ETKA 3H8FA 2FXKA 3IIFA 4R7MA 5CMSA 1BPMA 4ZX9A 4IQYA 1YD9A 4ABLA 4ETJA 5CB5A 4GUAA 3IJ3A 2X47A 4ZYQA 5FSVA 4ZY1A 1BPNA 1LANA 1BLLE 3KQZA
chains in the Genus database with same CATH superfamily
4ZX8A 1GYTA 4GVWA 4JLLA 3JRUA 1VHUA 5DUSA 3SIHA 3EJGA 3PEIA 4K0CA 2JZEA 3V2BA 2W2GA 5AILA 2ACFA 1TY8A 5CBMA 1TXZA 5FSYA 3SIIA 3EWPA 3EW5A 2JZFA 3ETIA 2JZDA 4X2TA 3EJFA 4GVVA 3GQOA 4ESSA 4JGKA 4KSIA 5D8NA 5FSUA 2VRIA 3VFQA 4J5QA 2XD7A 3IIDA 3Q6ZA 3KR4A 1LAMA 2FG1A 2BFRA 1LAPA 4J4ZA 4ABKA 4R76A 3T8WA 1SPVA 3H8GA 4R6TA 3GPGA 1LCPA 4ZI6A 5FSZA 1ZR5A 3KR5A 2DX6A 1ZR3A 3EWOA 4JCAA 3GPOA 2BFQA 2J9AA 3H8EA 4ZY2A 5CB3A 3GQEA 4ZY0A 3Q71A 5HIHA 5HOLA 2RNKA 2AFCA 3SIJA 3EWQA 1HJZA 3KQXA 1NJRA 2L8RA 4JVVA 3V45A 5FSXA 4KYBA 3EKEA 2KQVA 4D86A 4TU0A 2EEEA 5E3BA 4K3NA 4UMLA 3JZTA 2LGRA 3GPQA 2EWBA 4J5SA 2FAVA 3KZWA 3EWRA 3SIGA 4J5RA 4ETKA 3H8FA 2FXKA 3IIFA 4R7MA 5CMSA 1BPMA 4ZX9A 4IQYA 1YD9A 4ABLA 4ETJA 5CB5A 4GUAA 3IJ3A 2X47A 4ZYQA 5FSVA 4ZY1A 1BPNA 2WCTA 1LANA 1BLLE 3KQZA
chains in the Genus database with same CATH topology
4ZX8A 1GYTA 4GVWA 4JLLA 3JRUA 1VHUA 5DUSA 3SIHA 3EJGA 3PEIA 4K0CA 3V2BA 5AILA 2ACFA 1TY8A 5CBMA 1TXZA 5FSYA 3SIIA 3EWPA 3EW5A 3ETIA 4X2TA 3EJFA 4GVVA 3GQOA 4ESSA 4JGKA 4KSIA 5D8NA 5FSUA 2VRIA 3VFQA 4J5QA 2XD7A 3IIDA 3Q6ZA 3KR4A 1LAMA 2FG1A 2BFRA 1LAPA 4J4ZA 4ABKA 4R76A 3T8WA 1SPVA 3H8GA 4R6TA 3GPGA 1LCPA 4ZI6A 5FSZA 1ZR5A 3KR5A 2DX6A 1ZR3A 3EWOA 4JCAA 3GPOA 2BFQA 2J9AA 3H8EA 4ZY2A 5CB3A 3GQEA 4ZY0A 3Q71A 5HIHA 5HOLA 2AFCA 3SIJA 3EWQA 1HJZA 3KQXA 1NJRA 2L8RA 4JVVA 3V45A 5FSXA 4KYBA 3EKEA 4D86A 4TU0A 2EEEA 5E3BA 4K3NA 4UMLA 3JZTA 2LGRA 3GPQA 2EWBA 4J5SA 2FAVA 3KZWA 3EWRA 3SIGA 4J5RA 4ETKA 3H8FA 2FXKA 3IIFA 4R7MA 5CMSA 1BPMA 4ZX9A 4IQYA 1YD9A 4ABLA 4ETJA 5CB5A 4GUAA 3IJ3A 2X47A 4ZYQA 5FSVA 4ZY1A 1BPNA 1LANA 1BLLE 3KQZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZX8 A;  1GYT A;  4GVW A;  4JLL A;  3JRU A;  1VHU A;  5DUS A;  3SIH A;  3EJG A;  3PEI A;  4K0C A;  3V2B A;  5AIL A;  2ACF A;  1TY8 A;  5CBM A;  1TXZ A;  5FSY A;  3SII A;  3EWP A;  3EW5 A;  3ETI A;  4X2T A;  3EJF A;  4GVV A;  3GQO A;  4ESS A;  4JGK A;  4KSI A;  5D8N A;  5FSU A;  2VRI A;  3VFQ A;  4J5Q A;  2XD7 A;  3IID A;  3Q6Z A;  3KR4 A;  1LAM A;  2FG1 A;  2BFR A;  1LAP A;  4J4Z A;  4ABK A;  4R76 A;  3T8W A;  1SPV A;  3H8G A;  4R6T A;  3GPG A;  1LCP A;  4ZI6 A;  5FSZ A;  1ZR5 A;  3KR5 A;  2DX6 A;  1ZR3 A;  3EWO A;  4JCA A;  3GPO A;  2BFQ A;  2J9A A;  3H8E A;  4ZY2 A;  5CB3 A;  3GQE A;  4ZY0 A;  3Q71 A;  5HIH A;  5HOL A;  2AFC A;  3SIJ A;  3EWQ A;  1HJZ A;  3KQX A;  1NJR A;  2L8R A;  4JVV A;  3V45 A;  5FSX A;  4KYB A;  3EKE A;  4D86 A;  4TU0 A;  2EEE A;  5E3B A;  4K3N A;  4UML A;  3JZT A;  2LGR A;  3GPQ A;  2EWB A;  4J5S A;  2FAV A;  3KZW A;  3EWR A;  3SIG A;  4J5R A;  4ETK A;  3H8F A;  2FXK A;  3IIF A;  4R7M A;  5CMS A;  1BPM A;  4ZX9 A;  4IQY A;  1YD9 A;  4ABL A;  4ETJ A;  5CB5 A;  4GUA A;  3IJ3 A;  2X47 A;  4ZYQ A;  5FSV A;  4ZY1 A;  1BPN A;  1LAN A;  1BLL E;  3KQZ A; 
#chains in the Genus database with same CATH topology
 4ZX8 A;  1GYT A;  4GVW A;  4JLL A;  3JRU A;  1VHU A;  5DUS A;  3SIH A;  3EJG A;  3PEI A;  4K0C A;  2JZE A;  3V2B A;  2W2G A;  5AIL A;  2ACF A;  1TY8 A;  5CBM A;  1TXZ A;  5FSY A;  3SII A;  3EWP A;  3EW5 A;  2JZF A;  3ETI A;  2JZD A;  4X2T A;  3EJF A;  4GVV A;  3GQO A;  4ESS A;  4JGK A;  4KSI A;  5D8N A;  5FSU A;  2VRI A;  3VFQ A;  4J5Q A;  2XD7 A;  3IID A;  3Q6Z A;  3KR4 A;  1LAM A;  2FG1 A;  2BFR A;  1LAP A;  4J4Z A;  4ABK A;  4R76 A;  3T8W A;  1SPV A;  3H8G A;  4R6T A;  3GPG A;  1LCP A;  4ZI6 A;  5FSZ A;  1ZR5 A;  3KR5 A;  2DX6 A;  1ZR3 A;  3EWO A;  4JCA A;  3GPO A;  2BFQ A;  2J9A A;  3H8E A;  4ZY2 A;  5CB3 A;  3GQE A;  4ZY0 A;  3Q71 A;  5HIH A;  5HOL A;  2RNK A;  2AFC A;  3SIJ A;  3EWQ A;  1HJZ A;  3KQX A;  1NJR A;  2L8R A;  4JVV A;  3V45 A;  5FSX A;  4KYB A;  3EKE A;  2KQV A;  4D86 A;  4TU0 A;  2EEE A;  5E3B A;  4K3N A;  4UML A;  3JZT A;  2LGR A;  3GPQ A;  2EWB A;  4J5S A;  2FAV A;  3KZW A;  3EWR A;  3SIG A;  4J5R A;  4ETK A;  3H8F A;  2FXK A;  3IIF A;  4R7M A;  5CMS A;  1BPM A;  4ZX9 A;  4IQY A;  1YD9 A;  4ABL A;  4ETJ A;  5CB5 A;  4GUA A;  3IJ3 A;  2X47 A;  4ZYQ A;  5FSV A;  4ZY1 A;  1BPN A;  2WCT A;  1LAN A;  1BLL E;  3KQZ A; 
#chains in the Genus database with same CATH homology
 4ZX8 A;  1GYT A;  4GVW A;  4JLL A;  3JRU A;  1VHU A;  5DUS A;  3SIH A;  3EJG A;  3PEI A;  4K0C A;  3V2B A;  5AIL A;  2ACF A;  1TY8 A;  5CBM A;  1TXZ A;  5FSY A;  3SII A;  3EWP A;  3EW5 A;  3ETI A;  4X2T A;  3EJF A;  4GVV A;  3GQO A;  4ESS A;  4JGK A;  4KSI A;  5D8N A;  5FSU A;  2VRI A;  3VFQ A;  4J5Q A;  2XD7 A;  3IID A;  3Q6Z A;  3KR4 A;  1LAM A;  2FG1 A;  2BFR A;  1LAP A;  4J4Z A;  4ABK A;  4R76 A;  3T8W A;  1SPV A;  3H8G A;  4R6T A;  3GPG A;  1LCP A;  4ZI6 A;  5FSZ A;  1ZR5 A;  3KR5 A;  2DX6 A;  1ZR3 A;  3EWO A;  4JCA A;  3GPO A;  2BFQ A;  2J9A A;  3H8E A;  4ZY2 A;  5CB3 A;  3GQE A;  4ZY0 A;  3Q71 A;  5HIH A;  5HOL A;  2AFC A;  3SIJ A;  3EWQ A;  1HJZ A;  3KQX A;  1NJR A;  2L8R A;  4JVV A;  3V45 A;  5FSX A;  4KYB A;  3EKE A;  4D86 A;  4TU0 A;  2EEE A;  5E3B A;  4K3N A;  4UML A;  3JZT A;  2LGR A;  3GPQ A;  2EWB A;  4J5S A;  2FAV A;  3KZW A;  3EWR A;  3SIG A;  4J5R A;  4ETK A;  3H8F A;  2FXK A;  3IIF A;  4R7M A;  5CMS A;  1BPM A;  4ZX9 A;  4IQY A;  1YD9 A;  4ABL A;  4ETJ A;  5CB5 A;  4GUA A;  3IJ3 A;  2X47 A;  4ZYQ A;  5FSV A;  4ZY1 A;  1BPN A;  1LAN A;  1BLL E;  3KQZ A; 
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similar chains in the Genus database (?% sequence similarity)
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