4K0CA

Crystal structure of the computationally designed serine hydrolase. northeast structural genomics consortium (nesg) target or317
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
160
structure length
160
Chain Sequence
ARIRDVQGDITEFQGDAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIGKIRVGEAAVTGAGNLPVRYVIHAAVLGDEPASLETVRKATKSALEKAVELGLKTVAFTVPGAWVGGLPAEAVRRVMVEEIKKAPDTLEVTGVHGTEKSAEACRRARLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords designed serine hydrolase
publication title Northeast Structural Genomics Consortium Target OR317
rcsb
source organism Synthetic construct
total genus 50
structure length 160
sequence length 160
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-04-03
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 4k0cA00
4J4ZA 5FSUA 2L8RA 4X2TA 4ZI6A 4D86A 1YD9A 3IIFA 3EJFA 4JCAA 1GYTA 3IJ3A 2EEEA 2DX6A 3Q71A 3ETIA 2XD7A 2ACFA 2VRIA 3GPQA 5CB5A 3GQEA 1LCPA 4ZX8A 4R6TA 4IQYA 1NJRA 4ZX9A 3EW5A 1SPVA 5D8NA 4K3NA 4ABKA 4TU0A 1LAMA 1ZR5A 5HIHA 5HOLA 1TY8A 4K0CA 3SIGA 4ZY0A 5CBMA 3EKEA 4J5SA 3SIHA 3H8EA 4UMLA 3EWPA 3PEIA 4ESSA 4ETJA 2AFCA 3KQZA 4JVVA 4ETKA 5FSYA 5FSZA 3T8WA 2EWBA 3SIIA 2FXKA 5DUSA 2J9AA 2FAVA 2LGRA 5CB3A 1BLLE 4KSIA 4R76A 3V2BA 1LAPA 1BPMA 4JLLA 1HJZA 5FSXA 5CMSA 5E3BA 3EWRA 3KZWA 3VFQA 4JGKA 4J5QA 3KR4A 3KR5A 4ZY2A 3JRUA 4GVVA 3Q6ZA 4ZY1A 5FSVA 1BPNA 4GVWA 1ZR3A 2X47A 3GPOA 3KQXA 3JZTA 3SIJA 2BFQA 4GUAA 4KYBA 3H8GA 5AILA 4J5RA 4ZYQA 4ABLA 2FG1A 3GPGA 1VHUA 3EJGA 3EWQA 1LANA 4R7MA 3EWOA 2BFRA 3H8FA 3V45A 3IIDA 3GQOA 1TXZA
chains in the Genus database with same CATH superfamily
4J4ZA 5FSUA 2L8RA 4X2TA 4ZI6A 4D86A 1YD9A 2RNKA 3IIFA 3EJFA 4JCAA 1GYTA 3IJ3A 2EEEA 2DX6A 3Q71A 3ETIA 2XD7A 2ACFA 2VRIA 3GPQA 2JZDA 5CB5A 2JZFA 3GQEA 1LCPA 4ZX8A 4R6TA 4IQYA 1NJRA 4ZX9A 3EW5A 2KQVA 1SPVA 5D8NA 4K3NA 4ABKA 4TU0A 1LAMA 1ZR5A 5HIHA 5HOLA 1TY8A 4K0CA 3SIGA 4ZY0A 5CBMA 3EKEA 4J5SA 3SIHA 3H8EA 4UMLA 3EWPA 3PEIA 4ESSA 4ETJA 2AFCA 3KQZA 4JVVA 4ETKA 5FSYA 5FSZA 3T8WA 2EWBA 3SIIA 2FXKA 5DUSA 2J9AA 2FAVA 2LGRA 5CB3A 1BLLE 4KSIA 4R76A 3V2BA 1LAPA 2JZEA 1BPMA 4JLLA 1HJZA 5FSXA 5CMSA 5E3BA 3EWRA 3KZWA 3VFQA 4JGKA 4J5QA 3KR4A 3KR5A 4ZY2A 3JRUA 4GVVA 3Q6ZA 4ZY1A 5FSVA 1BPNA 4GVWA 1ZR3A 2X47A 3GPOA 3KQXA 3JZTA 3SIJA 2BFQA 2WCTA 4GUAA 2W2GA 3H8GA 4KYBA 5AILA 4J5RA 4ZYQA 4ABLA 2FG1A 3GPGA 1VHUA 3EJGA 3EWQA 1LANA 4R7MA 3EWOA 2BFRA 3H8FA 3V45A 3IIDA 3GQOA 1TXZA
chains in the Genus database with same CATH topology
4J4ZA 5FSUA 2L8RA 4X2TA 4ZI6A 4D86A 1YD9A 3IIFA 3EJFA 4JCAA 1GYTA 3IJ3A 2EEEA 2DX6A 3Q71A 3ETIA 2XD7A 2ACFA 2VRIA 3GPQA 5CB5A 3GQEA 1LCPA 4ZX8A 4R6TA 4IQYA 1NJRA 4ZX9A 3EW5A 1SPVA 5D8NA 4K3NA 4ABKA 4TU0A 1LAMA 1ZR5A 5HIHA 5HOLA 1TY8A 4K0CA 3SIGA 4ZY0A 5CBMA 3EKEA 4J5SA 3SIHA 3H8EA 4UMLA 3EWPA 3PEIA 4ESSA 4ETJA 2AFCA 3KQZA 4JVVA 4ETKA 5FSYA 5FSZA 3T8WA 2EWBA 3SIIA 2FXKA 5DUSA 2J9AA 2FAVA 2LGRA 5CB3A 1BLLE 4KSIA 4R76A 3V2BA 1LAPA 1BPMA 4JLLA 1HJZA 5FSXA 5CMSA 5E3BA 3EWRA 3KZWA 3VFQA 4JGKA 4J5QA 3KR4A 3KR5A 4ZY2A 3JRUA 4GVVA 3Q6ZA 4ZY1A 5FSVA 1BPNA 4GVWA 1ZR3A 2X47A 3GPOA 3KQXA 3JZTA 3SIJA 2BFQA 4GUAA 4KYBA 3H8GA 5AILA 4J5RA 4ZYQA 4ABLA 2FG1A 3GPGA 1VHUA 3EJGA 3EWQA 1LANA 4R7MA 3EWOA 2BFRA 3H8FA 3V45A 3IIDA 3GQOA 1TXZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4J4Z A;  5FSU A;  2L8R A;  4X2T A;  4ZI6 A;  4D86 A;  1YD9 A;  3IIF A;  3EJF A;  4JCA A;  1GYT A;  3IJ3 A;  2EEE A;  2DX6 A;  3Q71 A;  3ETI A;  2XD7 A;  2ACF A;  2VRI A;  3GPQ A;  5CB5 A;  3GQE A;  1LCP A;  4ZX8 A;  4R6T A;  4IQY A;  1NJR A;  4ZX9 A;  3EW5 A;  1SPV A;  5D8N A;  4K3N A;  4ABK A;  4TU0 A;  1LAM A;  1ZR5 A;  5HIH A;  5HOL A;  1TY8 A;  4K0C A;  3SIG A;  4ZY0 A;  5CBM A;  3EKE A;  4J5S A;  3SIH A;  3H8E A;  4UML A;  3EWP A;  3PEI A;  4ESS A;  4ETJ A;  2AFC A;  3KQZ A;  4JVV A;  4ETK A;  5FSY A;  5FSZ A;  3T8W A;  2EWB A;  3SII A;  2FXK A;  5DUS A;  2J9A A;  2FAV A;  2LGR A;  5CB3 A;  1BLL E;  4KSI A;  4R76 A;  3V2B A;  1LAP A;  1BPM A;  4JLL A;  1HJZ A;  5FSX A;  5CMS A;  5E3B A;  3EWR A;  3KZW A;  3VFQ A;  4JGK A;  4J5Q A;  3KR4 A;  3KR5 A;  4ZY2 A;  3JRU A;  4GVV A;  3Q6Z A;  4ZY1 A;  5FSV A;  1BPN A;  4GVW A;  1ZR3 A;  2X47 A;  3GPO A;  3KQX A;  3JZT A;  3SIJ A;  2BFQ A;  4GUA A;  4KYB A;  3H8G A;  5AIL A;  4J5R A;  4ZYQ A;  4ABL A;  2FG1 A;  3GPG A;  1VHU A;  3EJG A;  3EWQ A;  1LAN A;  4R7M A;  3EWO A;  2BFR A;  3H8F A;  3V45 A;  3IID A;  3GQO A;  1TXZ A; 
#chains in the Genus database with same CATH topology
 4J4Z A;  5FSU A;  2L8R A;  4X2T A;  4ZI6 A;  4D86 A;  1YD9 A;  2RNK A;  3IIF A;  3EJF A;  4JCA A;  1GYT A;  3IJ3 A;  2EEE A;  2DX6 A;  3Q71 A;  3ETI A;  2XD7 A;  2ACF A;  2VRI A;  3GPQ A;  2JZD A;  5CB5 A;  2JZF A;  3GQE A;  1LCP A;  4ZX8 A;  4R6T A;  4IQY A;  1NJR A;  4ZX9 A;  3EW5 A;  2KQV A;  1SPV A;  5D8N A;  4K3N A;  4ABK A;  4TU0 A;  1LAM A;  1ZR5 A;  5HIH A;  5HOL A;  1TY8 A;  4K0C A;  3SIG A;  4ZY0 A;  5CBM A;  3EKE A;  4J5S A;  3SIH A;  3H8E A;  4UML A;  3EWP A;  3PEI A;  4ESS A;  4ETJ A;  2AFC A;  3KQZ A;  4JVV A;  4ETK A;  5FSY A;  5FSZ A;  3T8W A;  2EWB A;  3SII A;  2FXK A;  5DUS A;  2J9A A;  2FAV A;  2LGR A;  5CB3 A;  1BLL E;  4KSI A;  4R76 A;  3V2B A;  1LAP A;  2JZE A;  1BPM A;  4JLL A;  1HJZ A;  5FSX A;  5CMS A;  5E3B A;  3EWR A;  3KZW A;  3VFQ A;  4JGK A;  4J5Q A;  3KR4 A;  3KR5 A;  4ZY2 A;  3JRU A;  4GVV A;  3Q6Z A;  4ZY1 A;  5FSV A;  1BPN A;  4GVW A;  1ZR3 A;  2X47 A;  3GPO A;  3KQX A;  3JZT A;  3SIJ A;  2BFQ A;  2WCT A;  4GUA A;  2W2G A;  3H8G A;  4KYB A;  5AIL A;  4J5R A;  4ZYQ A;  4ABL A;  2FG1 A;  3GPG A;  1VHU A;  3EJG A;  3EWQ A;  1LAN A;  4R7M A;  3EWO A;  2BFR A;  3H8F A;  3V45 A;  3IID A;  3GQO A;  1TXZ A; 
#chains in the Genus database with same CATH homology
 4J4Z A;  5FSU A;  2L8R A;  4X2T A;  4ZI6 A;  4D86 A;  1YD9 A;  3IIF A;  3EJF A;  4JCA A;  1GYT A;  3IJ3 A;  2EEE A;  2DX6 A;  3Q71 A;  3ETI A;  2XD7 A;  2ACF A;  2VRI A;  3GPQ A;  5CB5 A;  3GQE A;  1LCP A;  4ZX8 A;  4R6T A;  4IQY A;  1NJR A;  4ZX9 A;  3EW5 A;  1SPV A;  5D8N A;  4K3N A;  4ABK A;  4TU0 A;  1LAM A;  1ZR5 A;  5HIH A;  5HOL A;  1TY8 A;  4K0C A;  3SIG A;  4ZY0 A;  5CBM A;  3EKE A;  4J5S A;  3SIH A;  3H8E A;  4UML A;  3EWP A;  3PEI A;  4ESS A;  4ETJ A;  2AFC A;  3KQZ A;  4JVV A;  4ETK A;  5FSY A;  5FSZ A;  3T8W A;  2EWB A;  3SII A;  2FXK A;  5DUS A;  2J9A A;  2FAV A;  2LGR A;  5CB3 A;  1BLL E;  4KSI A;  4R76 A;  3V2B A;  1LAP A;  1BPM A;  4JLL A;  1HJZ A;  5FSX A;  5CMS A;  5E3B A;  3EWR A;  3KZW A;  3VFQ A;  4JGK A;  4J5Q A;  3KR4 A;  3KR5 A;  4ZY2 A;  3JRU A;  4GVV A;  3Q6Z A;  4ZY1 A;  5FSV A;  1BPN A;  4GVW A;  1ZR3 A;  2X47 A;  3GPO A;  3KQX A;  3JZT A;  3SIJ A;  2BFQ A;  4GUA A;  4KYB A;  3H8G A;  5AIL A;  4J5R A;  4ZYQ A;  4ABL A;  2FG1 A;  3GPG A;  1VHU A;  3EJG A;  3EWQ A;  1LAN A;  4R7M A;  3EWO A;  2BFR A;  3H8F A;  3V45 A;  3IID A;  3GQO A;  1TXZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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