4LPFA

Crystal structure of mycobacterium tuberculosis imidazole glycerol phosphate dehydratase in complex with an inhibitor
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
190
structure length
190
Chain Sequence
SRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords Imidazoleglycerol-phosphate dehydratase
publication title Crystal structures of the native, substrate- bound and inhibited forms of Mycobacterium tuberculosis imidazole glycerol phosphate dehydratase
rcsb
source organism Mycobacterium tuberculosis h37rv
total genus 60
structure length 190
sequence length 190
ec nomenclature ec 4.2.1.19: Imidazoleglycerol-phosphate dehydratase.
pdb deposition date 2013-07-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 4lpfA01
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 4lpfA02
4LOMA 4LPFA 5DNXA 5EL9A 4MU3A 4GQUA 5DNLA 4MU0A 5ELWA 4QNKA 2AE8A 2F1DA 1RHYA 4QNJA 4MU1A 5EKWA 4MU4A
chains in the Genus database with same CATH superfamily
2VESA 4BA2B 4B3RE 3Q1QA 4LFAE 4DV2E 4AQYI 2C38A 4FW7A 3NZKA 4IZJA 1ZXNA 1FKAE 4NXME 5FLXQ 4LF6E 1N36E 1HNXI 3PS3A 4FWHA 4DU8A 2GQ0A 5LMUI 1N32I 1KKHA 2PO1A 2HKEA 4LF8I 1NHJA 2DEJA 1Y60A 2UXDE 4AIMA 4IZKA 4DUYE 5K36C 5BR8E 3CDJA 4MYUA 1FJGI 4PU9A 2F4VE 4K0KI 1KTVA 3LNUA 3QT6A 1I94I 4GQUA 4EMDA 4DPWA 4AIDA 1HR0E 5LMUE 3J80Q 1XMOI 3F0NA 1HK7A 5C0XE 4JI3I 1U2RA 1EA6A 4LCFA 3P3CA 5JEAD 2O1WA 2NN6B 4OO1C 1NHIA 3WU6A 5C0XD 2WNRA 1EI1A 4LPFA 4BA2A 4OX9E 1RR9A 1IBMI 3U1KA 4JI5E 2O3ZA 2R3VA 1Z5AA 3PRYA 3ZKBA 2C39B 4DV5E 1VISA 3M6AA 1Y4SA 2HKJA 2C37A 4LF5E 1Y6ZA 3L7ZB 4QNKA 2UXCI 4YHHE 4LF9E 3ZKDA 4M1KA 1Z59A 1Z0EA 4J3DA 4DXLA 3T1HE 5K36D 2UXBI 2GS8A 2UU9I 4B3SE 4JI4E 3M7ND 1ZM2A 2O1TA 1NHHA 4FWGA 2PO2A 2ZBKB 3B78A 4P7AA 3M85D 4ZVIA 4B3TI 3T1YE 4IFDC 2LJPA 4BA1B 1H72C 5JEAF 3PYGA 3KRNA 5C0XF 2E5LI 5JEAA 2EFGA 3GONA 2JEBA 2Z5BB 4ISAA 4HACA 3H4LA 1HNZE 1A6FA 3GLLA 4PRVA 3PYDA 1RHYA 4DR7I 4JYAI 4LCGA 3HULA 4Z7CA 4KQVA 3M7NG 1PKPA 2GO4A 3L7ZA 4P52A 4X66I 3M85G 2E1RA 4JI6I 5K36F 4GKJI 3J81C 1XNQI 2A2DA 2HFSA 2NN6C 4DPXA 5K36A 2WP8A 2BM0A 5DRRA 5IWAE 4JYAE 1UDQA 2JE6B 4FW9A 1YH8A 4HXZA 4WUDA 4DV7E 1IBLE 4JG4A 5DRQA 4WUCA 4BA1A 2PNMA 4JI1E 4X62I 4LF4E 4NXNI 4DV6E 4JI7I 1USVA 4OZEA 5DNLA 4WUBA 5L3JA 4DR1I 1Z0BA 4FW3A 4IFDB 2VF3A 4DV1E 4JV5E 2V34A 1KIJA 3J7AM 2PO0B 4GKKI 4OO1A 1XXEA 2BM1A 4DUZI 5GMEA 1MX0A 4AM3A 1N34I 1OYSA 3WU4A 4AQYE 5FLXC 1ZM4A 1H7SA 5LMNI 3P76A 5JEAE 1HNXE 1OYPA 5IT9Q 1N32E 3V2UC 4LFCI 4U3BA 1FWLA 4LF8E 3U1YA 1XHKA 2BR2B 3K17A 1N0VC 4HY1A 3ZZTA 1FJGE 4LF7I 1IBKI 4K0KE 4B3MI 1I94E 1H74A 4XTJA 1S4EA 4DU7A 4IFDA 4QNJA 3J80C 4MU4A 2A2CA 1USUA 4DR2I 1XMOE 2V2QA 4JI3E 3HKMA 4DR5I 5K36E 2IERA 1XMQI 4ED4A 5FWKA 2V8PA 3PS2A 1J5EI 1IBME 2BA0D 4DR3I 2HHHI 3GMEA 2ZITA 4X64I 1E3PA 5C0XB 3QT8A 2Q2EB 2IESA 1ZXMA 3QT5A 2UUCI 3JAMQ 2UUBI 2JEAB 1WUUA 4DR4I 1HNWI 5DROA 4DR6I 4X65I 4OO1E 1Z0CA 1FWKA 2UXCE 1UDNA 5DNXA 2J7KA 2BR2A 3B82A 1KVKA 4DV4I 4KHPI 2NN6A 5DRPA 1R6MA 4FW6A 4OO1D 1FNMA 1N0UA 3DD6A 2UXBE 4Z7YA 2VQEI 2UU9E 3OTOI 1ELOA 1Z0TA 2XEXA 2Z5CB 2ZM6I 4MDTA 2PNZB 4B3TE 2VQFI 1ZM3A 2C39A 1DARA 1Z0VA 4HYMA 4JI8I 1S16A 1N33I 4DPUA 2HFUA 2DEIA 2E5LE 2V2VA 1Z5BA 4JI0I 5EL9A 3OTOE 4FN5A 5LL6R 4LFBI 4UT4A 2C38B 3WU5A 5A2QQ 4IZJB 5EKWA 2ZM6E 3D4JA 4IFDE 2OI2A 4DV3I 3J81Q 2UUAI 4DR7E 2X36A 4USKA 3ZZUA 2PO1B 2J65A 4JI2I 2WW4A 4IFDD 4X66E 3WU3A 4DPTA 4JI0E 4PRXA 3J7AG 4JI6E 4OO1F 3PYEA 4LCHA 4USMA 4GKJE 4B3RI 1XNQE 4LFAI 4DV2I 1PVGA 4U3DA 3ZM7A 2Z5BA 1Y5YA 3B8HA 1D6TA 2CVEA 4NXMI 2PNZA 4LF6I 2AJ4A 1N36I 3V5RA 4X62E 1QZRA 5C0XC 4OKGA 4NXNE 4JI7E 3Q6MA 3PYFA 2UXDI 4R1FA 4DUYI 5BR8I 4DR1E 3CDIA 2NN6E 2CG9A 2F4VI 1OJ4A 4DPYA 4RPFA 4GKKE 1Z5CA 5GMDA 2NN6D 1UDOA 3P06A 4FWDA 1HR0I 2PNLA 2C37B 4DUZE 4DV0I 2JE6A 1N34E 4IFDF 4UTGA 1BKNA 3Q6NA 1Z0GA 5ELWA 2HK3A 5LMNE 1VI7A 4OX9I 3B4TA 5IT9C 4JI5I 2PO2B 3H1CA 2PO0A 4DV5I 4DV0E 3LPSA 4LFCE 2BA1D 3HJCA 1P42A 2IOQA 4LF5I 3LTOA 4YHHI 4LF7E 4LF9I 4YY3I 3K1JA 2F1DA 2GO3A 1IBKE 2O1UA 4B3ME 5JEAB 3T1HI 2JEBB 1R6LA 4MYTA 4B3SI 4JI4I 3ZZ0A 4HACB 4DR2E 4I3HA 2NN6F 3T1YI 4IS9A 4DR5E 1XMQE 1E3HA 1FI4A 4YY3E 2IOPA 1J5EE 4LOMA 4DR3E 2HHHE 2BA1G 4X64E 3JAMC 3CWVA 1B63A 3GCMA 2UUCE 4MU0A 1PIEA 2WP8B 1XNRI 1YHCA 1NZ0A 2UUBE 5K36B 1HNZI 4DR4E 1HNWE 4N3OA 4DR6E 4X65E 2NPFA 2BA0G 2BV3A 4DV4E 2CGEA 4FW4A 4KHPE 2JT2A 4IZJD 4FW5A 2O1VA 2VQEE 3PS1A 2HK2A 4OO1B 1XNRE 5C0XA 1UDSA 2CZ9A 2VQFE 2R42A 4JI8E 5IWAI 2JEAA 4DV7I 1N33E 1IBLI 1MU5A 3P3GA 1B62A 1Y4UA 3K85A 4IZKB 4JI1I 5A2QC 4LF4I 3QT7A 4DV6I 4URLA 1RREA 1H7UA 4LFBE 2Z5EA 3UHMA 4NBQA 4MQYA 1UEKA 1OYRA 1MG7A 4MU1A 4DV1I 4JV5I 2Z5CA 4DV3E 2UUAE 1ZM9A 2V2ZA 2AE8A 1K47A 5JEAC 1Z0WA 1H73A 4JI2E 4MU3A 3P3EA 2X7IA 2WNRB
chains in the Genus database with same CATH topology
4LOMA 4LPFA 5DNXA 5EL9A 4MU3A 4GQUA 5DNLA 4MU0A 5ELWA 4QNKA 2AE8A 2F1DA 1RHYA 4QNJA 4MU1A 5EKWA 4MU4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4LOM A;  4LPF A;  5DNX A;  5EL9 A;  4MU3 A;  4GQU A;  5DNL A;  4MU0 A;  5ELW A;  4QNK A;  2AE8 A;  2F1D A;  1RHY A;  4QNJ A;  4MU1 A;  5EKW A;  4MU4 A; 
#chains in the Genus database with same CATH topology
 2VES A;  4BA2 B;  4B3R E;  3Q1Q A;  4LFA E;  4DV2 E;  4AQY I;  2C38 A;  4FW7 A;  3NZK A;  4IZJ A;  1ZXN A;  1FKA E;  4NXM E;  5FLX Q;  4LF6 E;  1N36 E;  1HNX I;  3PS3 A;  4FWH A;  4DU8 A;  2GQ0 A;  5LMU I;  1N32 I;  1KKH A;  2PO1 A;  2HKE A;  4LF8 I;  1NHJ A;  2DEJ A;  1Y60 A;  2UXD E;  4AIM A;  4IZK A;  4DUY E;  5K36 C;  5BR8 E;  3CDJ A;  4MYU A;  1FJG I;  4PU9 A;  2F4V E;  4K0K I;  1KTV A;  3LNU A;  3QT6 A;  1I94 I;  4GQU A;  4EMD A;  4DPW A;  4AID A;  1HR0 E;  5LMU E;  3J80 Q;  1XMO I;  3F0N A;  1HK7 A;  5C0X E;  4JI3 I;  1U2R A;  1EA6 A;  4LCF A;  3P3C A;  5JEA D;  2O1W A;  2NN6 B;  4OO1 C;  1NHI A;  3WU6 A;  5C0X D;  2WNR A;  1EI1 A;  4LPF A;  4BA2 A;  4OX9 E;  1RR9 A;  1IBM I;  3U1K A;  4JI5 E;  2O3Z A;  2R3V A;  1Z5A A;  3PRY A;  3ZKB A;  2C39 B;  4DV5 E;  1VIS A;  3M6A A;  1Y4S A;  2HKJ A;  2C37 A;  4LF5 E;  1Y6Z A;  3L7Z B;  4QNK A;  2UXC I;  4YHH E;  4LF9 E;  3ZKD A;  4M1K A;  1Z59 A;  1Z0E A;  4J3D A;  4DXL A;  3T1H E;  5K36 D;  2UXB I;  2GS8 A;  2UU9 I;  4B3S E;  4JI4 E;  3M7N D;  1ZM2 A;  2O1T A;  1NHH A;  4FWG A;  2PO2 A;  2ZBK B;  3B78 A;  4P7A A;  3M85 D;  4ZVI A;  4B3T I;  3T1Y E;  4IFD C;  2LJP A;  4BA1 B;  1H72 C;  5JEA F;  3PYG A;  3KRN A;  5C0X F;  2E5L I;  5JEA A;  2EFG A;  3GON A;  2JEB A;  2Z5B B;  4ISA A;  4HAC A;  3H4L A;  1HNZ E;  1A6F A;  3GLL A;  4PRV A;  3PYD A;  1RHY A;  4DR7 I;  4JYA I;  4LCG A;  3HUL A;  4Z7C A;  4KQV A;  3M7N G;  1PKP A;  2GO4 A;  3L7Z A;  4P52 A;  4X66 I;  3M85 G;  2E1R A;  4JI6 I;  5K36 F;  4GKJ I;  3J81 C;  1XNQ I;  2A2D A;  2HFS A;  2NN6 C;  4DPX A;  5K36 A;  2WP8 A;  2BM0 A;  5DRR A;  5IWA E;  4JYA E;  1UDQ A;  2JE6 B;  4FW9 A;  1YH8 A;  4HXZ A;  4WUD A;  4DV7 E;  1IBL E;  4JG4 A;  5DRQ A;  4WUC A;  4BA1 A;  2PNM A;  4JI1 E;  4X62 I;  4LF4 E;  4NXN I;  4DV6 E;  4JI7 I;  1USV A;  4OZE A;  5DNL A;  4WUB A;  5L3J A;  4DR1 I;  1Z0B A;  4FW3 A;  4IFD B;  2VF3 A;  4DV1 E;  4JV5 E;  2V34 A;  1KIJ A;  3J7A M;  2PO0 B;  4GKK I;  4OO1 A;  1XXE A;  2BM1 A;  4DUZ I;  5GME A;  1MX0 A;  4AM3 A;  1N34 I;  1OYS A;  3WU4 A;  4AQY E;  5FLX C;  1ZM4 A;  1H7S A;  5LMN I;  3P76 A;  5JEA E;  1HNX E;  1OYP A;  5IT9 Q;  1N32 E;  3V2U C;  4LFC I;  4U3B A;  1FWL A;  4LF8 E;  3U1Y A;  1XHK A;  2BR2 B;  3K17 A;  1N0V C;  4HY1 A;  3ZZT A;  1FJG E;  4LF7 I;  1IBK I;  4K0K E;  4B3M I;  1I94 E;  1H74 A;  4XTJ A;  1S4E A;  4DU7 A;  4IFD A;  4QNJ A;  3J80 C;  4MU4 A;  2A2C A;  1USU A;  4DR2 I;  1XMO E;  2V2Q A;  4JI3 E;  3HKM A;  4DR5 I;  5K36 E;  2IER A;  1XMQ I;  4ED4 A;  5FWK A;  2V8P A;  3PS2 A;  1J5E I;  1IBM E;  2BA0 D;  4DR3 I;  2HHH I;  3GME A;  2ZIT A;  4X64 I;  1E3P A;  5C0X B;  3QT8 A;  2Q2E B;  2IES A;  1ZXM A;  3QT5 A;  2UUC I;  3JAM Q;  2UUB I;  2JEA B;  1WUU A;  4DR4 I;  1HNW I;  5DRO A;  4DR6 I;  4X65 I;  4OO1 E;  1Z0C A;  1FWK A;  2UXC E;  1UDN A;  5DNX A;  2J7K A;  2BR2 A;  3B82 A;  1KVK A;  4DV4 I;  4KHP I;  2NN6 A;  5DRP A;  1R6M A;  4FW6 A;  4OO1 D;  1FNM A;  1N0U A;  3DD6 A;  2UXB E;  4Z7Y A;  2VQE I;  2UU9 E;  3OTO I;  1ELO A;  1Z0T A;  2XEX A;  2Z5C B;  2ZM6 I;  4MDT A;  2PNZ B;  4B3T E;  2VQF I;  1ZM3 A;  2C39 A;  1DAR A;  1Z0V A;  4HYM A;  4JI8 I;  1S16 A;  1N33 I;  4DPU A;  2HFU A;  2DEI A;  2E5L E;  2V2V A;  1Z5B A;  4JI0 I;  5EL9 A;  3OTO E;  4FN5 A;  5LL6 R;  4LFB I;  4UT4 A;  2C38 B;  3WU5 A;  5A2Q Q;  4IZJ B;  5EKW A;  2ZM6 E;  3D4J A;  4IFD E;  2OI2 A;  4DV3 I;  3J81 Q;  2UUA I;  4DR7 E;  2X36 A;  4USK A;  3ZZU A;  2PO1 B;  2J65 A;  4JI2 I;  2WW4 A;  4IFD D;  4X66 E;  3WU3 A;  4DPT A;  4JI0 E;  4PRX A;  3J7A G;  4JI6 E;  4OO1 F;  3PYE A;  4LCH A;  4USM A;  4GKJ E;  4B3R I;  1XNQ E;  4LFA I;  4DV2 I;  1PVG A;  4U3D A;  3ZM7 A;  2Z5B A;  1Y5Y A;  3B8H A;  1D6T A;  2CVE A;  4NXM I;  2PNZ A;  4LF6 I;  2AJ4 A;  1N36 I;  3V5R A;  4X62 E;  1QZR A;  5C0X C;  4OKG A;  4NXN E;  4JI7 E;  3Q6M A;  3PYF A;  2UXD I;  4R1F A;  4DUY I;  5BR8 I;  4DR1 E;  3CDI A;  2NN6 E;  2CG9 A;  2F4V I;  1OJ4 A;  4DPY A;  4RPF A;  4GKK E;  1Z5C A;  5GMD A;  2NN6 D;  1UDO A;  3P06 A;  4FWD A;  1HR0 I;  2PNL A;  2C37 B;  4DUZ E;  4DV0 I;  2JE6 A;  1N34 E;  4IFD F;  4UTG A;  1BKN A;  3Q6N A;  1Z0G A;  5ELW A;  2HK3 A;  5LMN E;  1VI7 A;  4OX9 I;  3B4T A;  5IT9 C;  4JI5 I;  2PO2 B;  3H1C A;  2PO0 A;  4DV5 I;  4DV0 E;  3LPS A;  4LFC E;  2BA1 D;  3HJC A;  1P42 A;  2IOQ A;  4LF5 I;  3LTO A;  4YHH I;  4LF7 E;  4LF9 I;  4YY3 I;  3K1J A;  2F1D A;  2GO3 A;  1IBK E;  2O1U A;  4B3M E;  5JEA B;  3T1H I;  2JEB B;  1R6L A;  4MYT A;  4B3S I;  4JI4 I;  3ZZ0 A;  4HAC B;  4DR2 E;  4I3H A;  2NN6 F;  3T1Y I;  4IS9 A;  4DR5 E;  1XMQ E;  1E3H A;  1FI4 A;  4YY3 E;  2IOP A;  1J5E E;  4LOM A;  4DR3 E;  2HHH E;  2BA1 G;  4X64 E;  3JAM C;  3CWV A;  1B63 A;  3GCM A;  2UUC E;  4MU0 A;  1PIE A;  2WP8 B;  1XNR I;  1YHC A;  1NZ0 A;  2UUB E;  5K36 B;  1HNZ I;  4DR4 E;  1HNW E;  4N3O A;  4DR6 E;  4X65 E;  2NPF A;  2BA0 G;  2BV3 A;  4DV4 E;  2CGE A;  4FW4 A;  4KHP E;  2JT2 A;  4IZJ D;  4FW5 A;  2O1V A;  2VQE E;  3PS1 A;  2HK2 A;  4OO1 B;  1XNR E;  5C0X A;  1UDS A;  2CZ9 A;  2VQF E;  2R42 A;  4JI8 E;  5IWA I;  2JEA A;  4DV7 I;  1N33 E;  1IBL I;  1MU5 A;  3P3G A;  1B62 A;  1Y4U A;  3K85 A;  4IZK B;  4JI1 I;  5A2Q C;  4LF4 I;  3QT7 A;  4DV6 I;  4URL A;  1RRE A;  1H7U A;  4LFB E;  2Z5E A;  3UHM A;  4NBQ A;  4MQY A;  1UEK A;  1OYR A;  1MG7 A;  4MU1 A;  4DV1 I;  4JV5 I;  2Z5C A;  4DV3 E;  2UUA E;  1ZM9 A;  2V2Z A;  2AE8 A;  1K47 A;  5JEA C;  1Z0W A;  1H73 A;  4JI2 E;  4MU3 A;  3P3E A;  2X7I A;  2WNR B; 
#chains in the Genus database with same CATH homology
 4LOM A;  4LPF A;  5DNX A;  5EL9 A;  4MU3 A;  4GQU A;  5DNL A;  4MU0 A;  5ELW A;  4QNK A;  2AE8 A;  2F1D A;  1RHY A;  4QNJ A;  4MU1 A;  5EKW A;  4MU4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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