4MYNA

Crystal structure of trypanosoma cruzi formiminoglutamase n114h variant with mn2+2
Total Genus 114
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
114
sequence length
298
structure length
298
Chain Sequence
TDDPRLLSLFSAQREEDADIVIIGFPYDEGCVRNGGRAGAKKGPAAFRFFLQRLGSVNNLELNVDASHLKLYDAGDITASTLEEAHEKLESKVFTVLARGAFPFVIGGGHDQSAPNGRAMLRAFPGDVGVINVDSHLDVRPPLSDGRVHSGTPFRQLLEESSFSGKRFVEFACQGSQCGALHAQYVRDHQGHLMWLSEVRKKGAVAALEDAFGLTGKNTFFSFDVDSLKSSDMPGVSCPAAVGLSAQEAFDMCFLAGKTPTVMMMDMSELNPLVEEYRSPRVAVYMFYHFVLGFATRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Formiminoglutamase
publication title Formiminoglutamase from trypanosoma cruzi is an arginase-like manganese metalloenzyme.
pubmed doi rcsb
source organism Trypanosoma cruzi
total genus 114
structure length 298
sequence length 298
ec nomenclature ec 3.5.3.8: Formimidoylglutamase.
pdb deposition date 2013-09-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4mynA00
3E6KA 4RHJA 5HJ9A 1P8QA 4ITYA 1P8NA 3SL1A 4IXUA 3KV2A 4G3HA 2EF4A 5RLAA 1T5FA 3MFVA 4IE1A 3MMRA 1ZPEA 3NIQA 3GN0A 1P8MA 1GQ7A 1RLAA 4I06A 4RLAA 1HQXA 4GSZA 1T4TA 4HWWA 1P8PA 4CEVA 3GMZA 2EIVA 4Q42A 1WOIA 4HZEA 1T4RA 4FCIA 4Q3RA 4FCKA 4IU4A 1WVAA 1P8RA 1HQGA 1HQ5A 4GSMA 3E6VA 2RLAA 1PQ3A 3SKKA 2ZAVA 3E9BA 4RHLA 1WOGA 4MYNA 3MJLA 3NIOA 1TBLA 3NIPA 4IE3A 1TBHA 3SJTA 4IE2A 4RHMA 4Q41A 4IXVA 2A0MA 1D3VA 4HXQA 4DZ4A 3MFWA 5HJAA 1T4PA 3THEA 3F80A 2AEBA 4MYFA 1P8SA 4Q3SA 3TF3A 4IU0A 3LHLA 5CEVA 4MYKA 1TA1A 3THJA 4Q3UA 1TBJA 4GWDA 4Q3RC 1XFKA 3E8ZA 2CEVA 3SL0A 2PHAA 3LP4A 3THHA 4RHKA 4RHQA 1T5GA 4Q3VA 3M1RA 4MYLA 4Q3TA 4Q3QA 3CEVA 1GQ6A 4MXRA 4Q40A 1ZPGA 3RLAA 1CEVA 3DJ8A 2EF5A 4Q3PA 2PLLA 1R1OA 1WVBA 3TH7A 1P8OA 1WOHA 4IU1A 3E8QA 4RHIA 4GSVA 1HQFA 4IU5A 2PHOA 1HQHA 4GWCA 3LP7A 3PZLA 1T4SA
chains in the Genus database with same CATH superfamily
4LXZA 3C0ZA 5DC8A 3E6KA 5DC7A 4RN2A 4RHJA 5HJ9A 1P8QA 4ITYA 1P8NA 3EWFA 3SL1A 4IXUA 3KV2A 4G3HA 5G13A 2EF4A 5G0GA 5RLAA 5EEMA 4ZURA 5THVA 3MAXA 1T5FA 3MFVA 4BZ8A 4IE1A 3MMRA 1ZPEA 5A2SA 2VQJA 5EEFA 2VQVA 4BKXB 3NIQA 3GN0A 1P8MA 5EFJD 1GQ7A 1RLAA 4I06A 4RLAA 1HQXA 4GSZA 4QA0A 4RN0A 1T4TA 4HWWA 1P8PA 4LY1A 3GMZA 4CEVA 2EIVA 4Q42A 1WOIA 5D1CA 4BZ6A 4HZEA 4CBTA 1T4RA 3F06A 5EFHA 4FCIA 1ZZ3A 4Q3RA 3SFHA 4FCKA 5IX0A 4IU4A 1WVAA 1P8RA 5D1DA 1HQGA 1HQ5A 3ZNRA 5EFKB 1C3RA 4GSMA 3E6VA 2RLAA 5G10A 1PQ3A 3SKKA 5JI5A 2VQQA 2ZAVA 3E9BA 4RHLA 1WOGA 4MYNA 5EF8A 3ZNSA 3MJLA 2GH6A 4BZ5A 5EF7A 5G0HA 5EEKA 5G11A 5G1BA 3NIOA 5BWZA 5G0YA 1TBLA 3NIPA 4IE3A 5EFGA 1TBHA 5G1CA 5G12A 3SJTA 4IE2A 3MZ4A 4RHMA 5THTA 5G3WA 4Q41A 5EFBD 4IXVA 1W22A 1ZZ1A 2A0MA 1C3PA 5G17A 1D3VA 5EEIA 4HXQA 4DZ4A 3MFWA 5HJAA 1T4PA 3THEA 3F80A 5THUA 2AEBA 4MYFA 4ZUMA 1P8SA 4QA6A 3EZPA 4Q3SA 3MENA 3TF3A 4IU0A 4BZ9A 3LHLA 2VCGA 5DC6A 5CEVA 4QA3A 2V5XA 4MYKA 1TA1A 3THJA 1T67A 3Q9FA 4QA1A 4Q3UA 1TBJA 5G0XA 4GWDA 2V5WA 5G0IA 4Q3RC 1XFKA 4QA4A 3E8ZA 2CEVA 5EFNA 5IWGA 3SL0A 2PHAA 3LP4A 1ZZ0A 5D1BA 4ZUNA 3THHA 4RHKA 4RHQA 4BZ7A 1T5GA 5DC5A 4Q3VA 2VQMA 3M1RA 4MYLA 4Q3TA 4Q3QA 3CEVA 4QA5A 3RQDA 1GQ6A 5THSA 3EZTA 1C3SA 4MXRA 1T64A 1ZPGA 4Q40A 3Q9EA 3RLAA 1CEVA 1VKGA 2VQOA 5ICNB 3C10A 3DJ8A 2EF5A 4Q3PA 2PLLA 3SFFA 1R1OA 5FCWA 4CQFA 3Q9CA 1WVBA 3TH7A 3MZ6A 3F0RA 5EENA 4ZUOA 1P8OA 1WOHA 4IU1A 5LI3A 3E8QA 4RHIA 3F07A 3MZ3A 4GSVA 3Q9BA 1HQFA 3EW8A 2VQWG 4RN1A 4IU5A 5FUEA 2PHOA 4ZUPA 1HQHA 4GWCA 3LP7A 4QA2A 4QA7A 1T69A 4ZUQA 3C0YA 3MZ7A 5G0JA 3PZLA 5G1AA 1T4SA 4A69A 4CBYA
chains in the Genus database with same CATH topology
3E6KA 4RHJA 5HJ9A 1P8QA 4ITYA 1P8NA 3SL1A 4IXUA 3KV2A 4G3HA 2EF4A 5RLAA 1T5FA 3MFVA 4IE1A 3MMRA 1ZPEA 3NIQA 3GN0A 1P8MA 1GQ7A 1RLAA 4I06A 4RLAA 1HQXA 4GSZA 1T4TA 4HWWA 1P8PA 4CEVA 3GMZA 2EIVA 4Q42A 1WOIA 4HZEA 1T4RA 4FCIA 4Q3RA 4FCKA 4IU4A 1WVAA 1P8RA 1HQGA 1HQ5A 4GSMA 3E6VA 2RLAA 1PQ3A 3SKKA 2ZAVA 3E9BA 4RHLA 1WOGA 4MYNA 3MJLA 3NIOA 1TBLA 3NIPA 4IE3A 1TBHA 3SJTA 4IE2A 4RHMA 4Q41A 4IXVA 2A0MA 1D3VA 4HXQA 4DZ4A 3MFWA 5HJAA 1T4PA 3THEA 3F80A 2AEBA 4MYFA 1P8SA 4Q3SA 3TF3A 4IU0A 3LHLA 5CEVA 4MYKA 1TA1A 3THJA 4Q3UA 1TBJA 4GWDA 4Q3RC 1XFKA 3E8ZA 2CEVA 3SL0A 2PHAA 3LP4A 3THHA 4RHKA 4RHQA 1T5GA 4Q3VA 3M1RA 4MYLA 4Q3TA 4Q3QA 3CEVA 1GQ6A 4MXRA 4Q40A 1ZPGA 3RLAA 1CEVA 3DJ8A 2EF5A 4Q3PA 2PLLA 1R1OA 1WVBA 3TH7A 1P8OA 1WOHA 4IU1A 3E8QA 4RHIA 4GSVA 1HQFA 4IU5A 2PHOA 1HQHA 4GWCA 3LP7A 3PZLA 1T4SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3E6K A;  4RHJ A;  5HJ9 A;  1P8Q A;  4ITY A;  1P8N A;  3SL1 A;  4IXU A;  3KV2 A;  4G3H A;  2EF4 A;  5RLA A;  1T5F A;  3MFV A;  4IE1 A;  3MMR A;  1ZPE A;  3NIQ A;  3GN0 A;  1P8M A;  1GQ7 A;  1RLA A;  4I06 A;  4RLA A;  1HQX A;  4GSZ A;  1T4T A;  4HWW A;  1P8P A;  4CEV A;  3GMZ A;  2EIV A;  4Q42 A;  1WOI A;  4HZE A;  1T4R A;  4FCI A;  4Q3R A;  4FCK A;  4IU4 A;  1WVA A;  1P8R A;  1HQG A;  1HQ5 A;  4GSM A;  3E6V A;  2RLA A;  1PQ3 A;  3SKK A;  2ZAV A;  3E9B A;  4RHL A;  1WOG A;  4MYN A;  3MJL A;  3NIO A;  1TBL A;  3NIP A;  4IE3 A;  1TBH A;  3SJT A;  4IE2 A;  4RHM A;  4Q41 A;  4IXV A;  2A0M A;  1D3V A;  4HXQ A;  4DZ4 A;  3MFW A;  5HJA A;  1T4P A;  3THE A;  3F80 A;  2AEB A;  4MYF A;  1P8S A;  4Q3S A;  3TF3 A;  4IU0 A;  3LHL A;  5CEV A;  4MYK A;  1TA1 A;  3THJ A;  4Q3U A;  1TBJ A;  4GWD A;  4Q3R C;  1XFK A;  3E8Z A;  2CEV A;  3SL0 A;  2PHA A;  3LP4 A;  3THH A;  4RHK A;  4RHQ A;  1T5G A;  4Q3V A;  3M1R A;  4MYL A;  4Q3T A;  4Q3Q A;  3CEV A;  1GQ6 A;  4MXR A;  4Q40 A;  1ZPG A;  3RLA A;  1CEV A;  3DJ8 A;  2EF5 A;  4Q3P A;  2PLL A;  1R1O A;  1WVB A;  3TH7 A;  1P8O A;  1WOH A;  4IU1 A;  3E8Q A;  4RHI A;  4GSV A;  1HQF A;  4IU5 A;  2PHO A;  1HQH A;  4GWC A;  3LP7 A;  3PZL A;  1T4S A; 
#chains in the Genus database with same CATH topology
 4LXZ A;  3C0Z A;  5DC8 A;  3E6K A;  5DC7 A;  4RN2 A;  4RHJ A;  5HJ9 A;  1P8Q A;  4ITY A;  1P8N A;  3EWF A;  3SL1 A;  4IXU A;  3KV2 A;  4G3H A;  5G13 A;  2EF4 A;  5G0G A;  5RLA A;  5EEM A;  4ZUR A;  5THV A;  3MAX A;  1T5F A;  3MFV A;  4BZ8 A;  4IE1 A;  3MMR A;  1ZPE A;  5A2S A;  2VQJ A;  5EEF A;  2VQV A;  4BKX B;  3NIQ A;  3GN0 A;  1P8M A;  5EFJ D;  1GQ7 A;  1RLA A;  4I06 A;  4RLA A;  1HQX A;  4GSZ A;  4QA0 A;  4RN0 A;  1T4T A;  4HWW A;  1P8P A;  4LY1 A;  3GMZ A;  4CEV A;  2EIV A;  4Q42 A;  1WOI A;  5D1C A;  4BZ6 A;  4HZE A;  4CBT A;  1T4R A;  3F06 A;  5EFH A;  4FCI A;  1ZZ3 A;  4Q3R A;  3SFH A;  4FCK A;  5IX0 A;  4IU4 A;  1WVA A;  1P8R A;  5D1D A;  1HQG A;  1HQ5 A;  3ZNR A;  5EFK B;  1C3R A;  4GSM A;  3E6V A;  2RLA A;  5G10 A;  1PQ3 A;  3SKK A;  5JI5 A;  2VQQ A;  2ZAV A;  3E9B A;  4RHL A;  1WOG A;  4MYN A;  5EF8 A;  3ZNS A;  3MJL A;  2GH6 A;  4BZ5 A;  5EF7 A;  5G0H A;  5EEK A;  5G11 A;  5G1B A;  3NIO A;  5BWZ A;  5G0Y A;  1TBL A;  3NIP A;  4IE3 A;  5EFG A;  1TBH A;  5G1C A;  5G12 A;  3SJT A;  4IE2 A;  3MZ4 A;  4RHM A;  5THT A;  5G3W A;  4Q41 A;  5EFB D;  4IXV A;  1W22 A;  1ZZ1 A;  2A0M A;  1C3P A;  5G17 A;  1D3V A;  5EEI A;  4HXQ A;  4DZ4 A;  3MFW A;  5HJA A;  1T4P A;  3THE A;  3F80 A;  5THU A;  2AEB A;  4MYF A;  4ZUM A;  1P8S A;  4QA6 A;  3EZP A;  4Q3S A;  3MEN A;  3TF3 A;  4IU0 A;  4BZ9 A;  3LHL A;  2VCG A;  5DC6 A;  5CEV A;  4QA3 A;  2V5X A;  4MYK A;  1TA1 A;  3THJ A;  1T67 A;  3Q9F A;  4QA1 A;  4Q3U A;  1TBJ A;  5G0X A;  4GWD A;  2V5W A;  5G0I A;  4Q3R C;  1XFK A;  4QA4 A;  3E8Z A;  2CEV A;  5EFN A;  5IWG A;  3SL0 A;  2PHA A;  3LP4 A;  1ZZ0 A;  5D1B A;  4ZUN A;  3THH A;  4RHK A;  4RHQ A;  4BZ7 A;  1T5G A;  5DC5 A;  4Q3V A;  2VQM A;  3M1R A;  4MYL A;  4Q3T A;  4Q3Q A;  3CEV A;  4QA5 A;  3RQD A;  1GQ6 A;  5THS A;  3EZT A;  1C3S A;  4MXR A;  1T64 A;  1ZPG A;  4Q40 A;  3Q9E A;  3RLA A;  1CEV A;  1VKG A;  2VQO A;  5ICN B;  3C10 A;  3DJ8 A;  2EF5 A;  4Q3P A;  2PLL A;  3SFF A;  1R1O A;  5FCW A;  4CQF A;  3Q9C A;  1WVB A;  3TH7 A;  3MZ6 A;  3F0R A;  5EEN A;  4ZUO A;  1P8O A;  1WOH A;  4IU1 A;  5LI3 A;  3E8Q A;  4RHI A;  3F07 A;  3MZ3 A;  4GSV A;  3Q9B A;  1HQF A;  3EW8 A;  2VQW G;  4RN1 A;  4IU5 A;  5FUE A;  2PHO A;  4ZUP A;  1HQH A;  4GWC A;  3LP7 A;  4QA2 A;  4QA7 A;  1T69 A;  4ZUQ A;  3C0Y A;  3MZ7 A;  5G0J A;  3PZL A;  5G1A A;  1T4S A;  4A69 A;  4CBY A; 
#chains in the Genus database with same CATH homology
 3E6K A;  4RHJ A;  5HJ9 A;  1P8Q A;  4ITY A;  1P8N A;  3SL1 A;  4IXU A;  3KV2 A;  4G3H A;  2EF4 A;  5RLA A;  1T5F A;  3MFV A;  4IE1 A;  3MMR A;  1ZPE A;  3NIQ A;  3GN0 A;  1P8M A;  1GQ7 A;  1RLA A;  4I06 A;  4RLA A;  1HQX A;  4GSZ A;  1T4T A;  4HWW A;  1P8P A;  4CEV A;  3GMZ A;  2EIV A;  4Q42 A;  1WOI A;  4HZE A;  1T4R A;  4FCI A;  4Q3R A;  4FCK A;  4IU4 A;  1WVA A;  1P8R A;  1HQG A;  1HQ5 A;  4GSM A;  3E6V A;  2RLA A;  1PQ3 A;  3SKK A;  2ZAV A;  3E9B A;  4RHL A;  1WOG A;  4MYN A;  3MJL A;  3NIO A;  1TBL A;  3NIP A;  4IE3 A;  1TBH A;  3SJT A;  4IE2 A;  4RHM A;  4Q41 A;  4IXV A;  2A0M A;  1D3V A;  4HXQ A;  4DZ4 A;  3MFW A;  5HJA A;  1T4P A;  3THE A;  3F80 A;  2AEB A;  4MYF A;  1P8S A;  4Q3S A;  3TF3 A;  4IU0 A;  3LHL A;  5CEV A;  4MYK A;  1TA1 A;  3THJ A;  4Q3U A;  1TBJ A;  4GWD A;  4Q3R C;  1XFK A;  3E8Z A;  2CEV A;  3SL0 A;  2PHA A;  3LP4 A;  3THH A;  4RHK A;  4RHQ A;  1T5G A;  4Q3V A;  3M1R A;  4MYL A;  4Q3T A;  4Q3Q A;  3CEV A;  1GQ6 A;  4MXR A;  4Q40 A;  1ZPG A;  3RLA A;  1CEV A;  3DJ8 A;  2EF5 A;  4Q3P A;  2PLL A;  1R1O A;  1WVB A;  3TH7 A;  1P8O A;  1WOH A;  4IU1 A;  3E8Q A;  4RHI A;  4GSV A;  1HQF A;  4IU5 A;  2PHO A;  1HQH A;  4GWC A;  3LP7 A;  3PZL A;  1T4S A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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