4N1LA

Crystal structures of nlrp14 pyrin domain reveal a conformational switch mechanism, regulating its molecular interactions
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
95
structure length
95
Chain Sequence
SSFFPDFGLLLYLEELNKEELNTFKLFLKETMEPEHGLTPWNEVKKARREDLANLMKKYYPGEKAWSVSLKIFGKMNRKDLCERAKEEINWSAQL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
molecule keywords NACHT, LRR and PYD domains-containing protein 14
publication title Structures of the NLRP14 pyrin domain reveal a conformational switch mechanism regulating its molecular interactions.
pubmed doi rcsb
source organism Homo sapiens
total genus 37
structure length 95
sequence length 95
ec nomenclature
pdb deposition date 2013-10-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02758 PYRIN PAAD/DAPIN/Pyrin domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 4n1lA00
4IZAB 4I16A 4M9ZA 2N00A 3MOPK 2DO9A 2NSNA 4D8OA 3YGSC 4A2QA 4P4HI 1WMGA 4RHWA 1Z6TA 1E3YA 4O7QA 4F44A 4DWNA 2NZ7A 4ZBWA 4IZ5E 3EZQA 3EZQB 2BBZA 2NAQA 2MPCA 4N1JA 4A2WA 2YGSA 2VGQA 2IB1A 1WH4A 3T6PA 3CRDA 4IZ7B 4O9LA 2YQFA 2G7RA 2KN6A 4N1KA 2O71A 4FH0A 3CL3A 1DGNA 3QF2A 4N1LA 4E9MA 2OF5A 1CY5A 3KATA 3LQQA 2YU0A 1ICHA 2B1WA 1YGOA 2BBRA 2N83A 4JUPA 1A1ZA 1CWWA 4O9FA 2LWEA 1WXPA 2LS7A 3J6JA 2HM2Q 2DBGA 4QOBA 2N1FA 2MS7A 2MB9A 1D2ZA 1D2ZB 3YGSP 4EWIA 1A1WA 1DDFA 4NQKA 4M9SA 2KM6A 4P4HA 2LWDA 1PN5A 2MS8A 2L9MA 2M5VA 2N80A 1NGRA 4JQWA 2DBHA 1E41A 2GF5A 2D96A 2A5YB 4RHWE 2YVIA 1UCPA 4F42A 2N7ZA 3LQRA 2L6AA 2N97A 1C15A 4LWDA 3J63A 2P1HA 4M9XA 2A9IA 2DBFA 2F1SA 3MOPG 1N3KA 4UZ0A 4O6XA 2MN4A 2DBDA 2OF5H 3MOPA 1FADA
chains in the Genus database with same CATH superfamily
4IZAB 4I16A 4M9ZA 2N00A 3MOPK 2DO9A 2NSNA 4D8OA 3YGSC 4A2QA 4P4HI 1WMGA 4RHWA 1Z6TA 1E3YA 4O7QA 4F44A 4DWNA 2NZ7A 4ZBWA 4IZ5E 3EZQA 3EZQB 2BBZA 2NAQA 2MPCA 4N1JA 4A2WA 2YGSA 2VGQA 2IB1A 1WH4A 3T6PA 3CRDA 4IZ7B 4O9LA 2YQFA 2G7RA 2KN6A 4N1KA 2O71A 4FH0A 3CL3A 1DGNA 3QF2A 4N1LA 4E9MA 2OF5A 1CY5A 3KATA 3LQQA 2YU0A 1ICHA 2B1WA 1YGOA 2BBRA 2N83A 4JUPA 1A1ZA 1CWWA 4O9FA 2LWEA 1WXPA 2LS7A 3J6JA 2HM2Q 2DBGA 4QOBA 2N1FA 2MS7A 2MJMA 2MB9A 1D2ZA 1D2ZB 2XV9A 3YGSP 4EWIA 1A1WA 1DDFA 4NQKA 4M9SA 2KM6A 4P4HA 2LWDA 1PN5A 2MS8A 2L9MA 2M5VA 2N80A 1NGRA 4JQWA 2DBHA 1E41A 2GF5A 2D96A 2A5YB 4RHWE 2YVIA 1UCPA 4F42A 2N7ZA 3LQRA 2L6AA 2N97A 1C15A 4LWDA 3J63A 2P1HA 4M9XA 2A9IA 2DBFA 2F1SA 3MOPG 1N3KA 4UZ0A 4O6XA 2MN4A 2DBDA 2OF5H 3MOPA 1FADA
chains in the Genus database with same CATH topology
4IZAB 4I16A 4M9ZA 2N00A 3MOPK 2DO9A 2NSNA 4D8OA 3YGSC 4A2QA 4P4HI 1WMGA 4RHWA 1Z6TA 1E3YA 4O7QA 4F44A 4DWNA 2NZ7A 4ZBWA 4IZ5E 3EZQA 3EZQB 2BBZA 2NAQA 2MPCA 4N1JA 4A2WA 2YGSA 2VGQA 2IB1A 1WH4A 3T6PA 3CRDA 4IZ7B 4O9LA 2YQFA 2G7RA 2KN6A 4N1KA 2O71A 4FH0A 3CL3A 1DGNA 3QF2A 4N1LA 4E9MA 2OF5A 1CY5A 3KATA 3LQQA 2YU0A 1ICHA 2B1WA 1YGOA 2BBRA 2N83A 4JUPA 1A1ZA 1CWWA 4O9FA 2LWEA 1WXPA 2LS7A 3J6JA 2HM2Q 2DBGA 4QOBA 2N1FA 2MS7A 2MJMA 2MB9A 1D2ZA 1D2ZB 2XV9A 3YGSP 4EWIA 1A1WA 1DDFA 4NQKA 4M9SA 2KM6A 4P4HA 2LWDA 1PN5A 2MS8A 2L9MA 2M5VA 2N80A 1NGRA 4JQWA 2DBHA 1E41A 2GF5A 2D96A 2A5YB 4RHWE 2YVIA 1UCPA 4F42A 2N7ZA 3LQRA 2L6AA 2N97A 1C15A 4LWDA 3J63A 2P1HA 4M9XA 2A9IA 2DBFA 2F1SA 3MOPG 1N3KA 4UZ0A 4O6XA 2MN4A 2DBDA 2OF5H 3MOPA 1FADA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IZA B;  4I16 A;  4M9Z A;  2N00 A;  3MOP K;  2DO9 A;  2NSN A;  4D8O A;  3YGS C;  4A2Q A;  4P4H I;  1WMG A;  4RHW A;  1Z6T A;  1E3Y A;  4O7Q A;  4F44 A;  4DWN A;  2NZ7 A;  4ZBW A;  4IZ5 E;  3EZQ A;  3EZQ B;  2BBZ A;  2NAQ A;  2MPC A;  4N1J A;  4A2W A;  2YGS A;  2VGQ A;  2IB1 A;  1WH4 A;  3T6P A;  3CRD A;  4IZ7 B;  4O9L A;  2YQF A;  2G7R A;  2KN6 A;  4N1K A;  2O71 A;  4FH0 A;  3CL3 A;  1DGN A;  3QF2 A;  4N1L A;  4E9M A;  2OF5 A;  1CY5 A;  3KAT A;  3LQQ A;  2YU0 A;  1ICH A;  2B1W A;  1YGO A;  2BBR A;  2N83 A;  4JUP A;  1A1Z A;  1CWW A;  4O9F A;  2LWE A;  1WXP A;  2LS7 A;  3J6J A;  2HM2 Q;  2DBG A;  4QOB A;  2N1F A;  2MS7 A;  2MB9 A;  1D2Z A;  1D2Z B;  3YGS P;  4EWI A;  1A1W A;  1DDF A;  4NQK A;  4M9S A;  2KM6 A;  4P4H A;  2LWD A;  1PN5 A;  2MS8 A;  2L9M A;  2M5V A;  2N80 A;  1NGR A;  4JQW A;  2DBH A;  1E41 A;  2GF5 A;  2D96 A;  2A5Y B;  4RHW E;  2YVI A;  1UCP A;  4F42 A;  2N7Z A;  3LQR A;  2L6A A;  2N97 A;  1C15 A;  4LWD A;  3J63 A;  2P1H A;  4M9X A;  2A9I A;  2DBF A;  2F1S A;  3MOP G;  1N3K A;  4UZ0 A;  4O6X A;  2MN4 A;  2DBD A;  2OF5 H;  3MOP A;  1FAD A; 
#chains in the Genus database with same CATH topology
 4IZA B;  4I16 A;  4M9Z A;  2N00 A;  3MOP K;  2DO9 A;  2NSN A;  4D8O A;  3YGS C;  4A2Q A;  4P4H I;  1WMG A;  4RHW A;  1Z6T A;  1E3Y A;  4O7Q A;  4F44 A;  4DWN A;  2NZ7 A;  4ZBW A;  4IZ5 E;  3EZQ A;  3EZQ B;  2BBZ A;  2NAQ A;  2MPC A;  4N1J A;  4A2W A;  2YGS A;  2VGQ A;  2IB1 A;  1WH4 A;  3T6P A;  3CRD A;  4IZ7 B;  4O9L A;  2YQF A;  2G7R A;  2KN6 A;  4N1K A;  2O71 A;  4FH0 A;  3CL3 A;  1DGN A;  3QF2 A;  4N1L A;  4E9M A;  2OF5 A;  1CY5 A;  3KAT A;  3LQQ A;  2YU0 A;  1ICH A;  2B1W A;  1YGO A;  2BBR A;  2N83 A;  4JUP A;  1A1Z A;  1CWW A;  4O9F A;  2LWE A;  1WXP A;  2LS7 A;  3J6J A;  2HM2 Q;  2DBG A;  4QOB A;  2N1F A;  2MS7 A;  2MJM A;  2MB9 A;  1D2Z A;  1D2Z B;  2XV9 A;  3YGS P;  4EWI A;  1A1W A;  1DDF A;  4NQK A;  4M9S A;  2KM6 A;  4P4H A;  2LWD A;  1PN5 A;  2MS8 A;  2L9M A;  2M5V A;  2N80 A;  1NGR A;  4JQW A;  2DBH A;  1E41 A;  2GF5 A;  2D96 A;  2A5Y B;  4RHW E;  2YVI A;  1UCP A;  4F42 A;  2N7Z A;  3LQR A;  2L6A A;  2N97 A;  1C15 A;  4LWD A;  3J63 A;  2P1H A;  4M9X A;  2A9I A;  2DBF A;  2F1S A;  3MOP G;  1N3K A;  4UZ0 A;  4O6X A;  2MN4 A;  2DBD A;  2OF5 H;  3MOP A;  1FAD A; 
#chains in the Genus database with same CATH homology
 4IZA B;  4I16 A;  4M9Z A;  2N00 A;  3MOP K;  2DO9 A;  2NSN A;  4D8O A;  3YGS C;  4A2Q A;  4P4H I;  1WMG A;  4RHW A;  1Z6T A;  1E3Y A;  4O7Q A;  4F44 A;  4DWN A;  2NZ7 A;  4ZBW A;  4IZ5 E;  3EZQ A;  3EZQ B;  2BBZ A;  2NAQ A;  2MPC A;  4N1J A;  4A2W A;  2YGS A;  2VGQ A;  2IB1 A;  1WH4 A;  3T6P A;  3CRD A;  4IZ7 B;  4O9L A;  2YQF A;  2G7R A;  2KN6 A;  4N1K A;  2O71 A;  4FH0 A;  3CL3 A;  1DGN A;  3QF2 A;  4N1L A;  4E9M A;  2OF5 A;  1CY5 A;  3KAT A;  3LQQ A;  2YU0 A;  1ICH A;  2B1W A;  1YGO A;  2BBR A;  2N83 A;  4JUP A;  1A1Z A;  1CWW A;  4O9F A;  2LWE A;  1WXP A;  2LS7 A;  3J6J A;  2HM2 Q;  2DBG A;  4QOB A;  2N1F A;  2MS7 A;  2MJM A;  2MB9 A;  1D2Z A;  1D2Z B;  2XV9 A;  3YGS P;  4EWI A;  1A1W A;  1DDF A;  4NQK A;  4M9S A;  2KM6 A;  4P4H A;  2LWD A;  1PN5 A;  2MS8 A;  2L9M A;  2M5V A;  2N80 A;  1NGR A;  4JQW A;  2DBH A;  1E41 A;  2GF5 A;  2D96 A;  2A5Y B;  4RHW E;  2YVI A;  1UCP A;  4F42 A;  2N7Z A;  3LQR A;  2L6A A;  2N97 A;  1C15 A;  4LWD A;  3J63 A;  2P1H A;  4M9X A;  2A9I A;  2DBF A;  2F1S A;  3MOP G;  1N3K A;  4UZ0 A;  4O6X A;  2MN4 A;  2DBD A;  2OF5 H;  3MOP A;  1FAD A; 
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