4N9JA

Crystal structure of the cryptic polo box domain of human plk4
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
222
structure length
222
Chain Sequence
TLRSITSPLVAHRLKPIRQKTKKAVVSILDSEEVCVELVKEYASQEYVKEVLQISSDGNTITIYYPNGGRGFPLADRPPSPTDNISRYSFDNLPEKYWRKYQYASRFVQLVRSKSPKITYFTRYAKCILMENSPGADFEVWFYDGVKIHKTEDFIQVIEKTGKSYTLKSESEVNSLKEEIKMYMDHANEGHRICLALESIISEEERKTRSAPFFPIIIGRKP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Cell cycle
molecule keywords Serine/threonine-protein kinase PLK4
publication title Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
pubmed doi rcsb
source organism Homo sapiens
total genus 60
structure length 222
sequence length 222
chains with identical sequence B
ec nomenclature ec 2.7.11.21: Polo kinase.
pdb deposition date 2013-10-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF18190 Plk4_PB1 Polo-like Kinase 4 Polo Box 1
A PF18409 Plk4_PB2 Polo-like Kinase 4 Polo Box 2
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1120.120 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain Arylsulfatase, C-terminal domain 4n9jA01
3.30.1120.130 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain Arylsulfatase, C-terminal domain 4n9jA02
4N7VA 4NKBA 4NK7A 4N7ZA 4G7NA 4N9JA
chains in the Genus database with same CATH superfamily
4WHLA 3KDRA 4E67A 3C5LA 3P36A 3BZIA 4HABA 2I9XA 4N9JA 1A87A 5DAYA 4O6WA 4E9DA 4YYPA 2QZUA 5DMVC 4DFWA 4CXSA 3FVHA 3P2ZA 4CXUA 4O56A 1E2SP 1P49A 1E3CP 4J7BB 3P2WA 4H5XA 1Q4KA 4O9WA 1E1ZP 1F34B 4NK7A 4FDJA 2UV8G 3GYVA 4E9CA 3Q1IA 2E50A 4FDIA 3RQ7A 2VKZG 3FS3A 2I9ZA 4G7NA 3HMJG 5AJ9A 3P35A 4LKMA 1E2TA 4X9RA 4N7ZA 4XB0A 4X9VA 3HIHA 4RS6A 5DMSA 1FSUA 4LKLA 5LHZA 4H71A 4CYSA 3LM3A 2N19A 4X9WA 3HIKA 4HCOA 3ED4A 5DNJA 1F32A 4RCPA 4WHKA 1HDHA 3P34A 2OJXA 1UMWA 3GYWA 1N2KA 4N7VA 2OGQA 1E33P 5J19A 2IA9A 4WHHA 4HY2A 3HFDA 4CYRA 1Q4OA 4CXKA 1AUKA 3P37A 1N2LA 4NKBA 3LXQA
chains in the Genus database with same CATH topology
3KDRA 1HDHA 4N7ZA 4N9JA 3GYWA 1N2KA 1E1ZP 5DAYA 4N7VA 4NK7A 1E33P 2QZUA 4FDJA 2UV8G 3GYVA 2E50A 4FDIA 3HFDA 4CYRA 2VKZG 4CXSA 1FSUA 3FS3A 4G7NA 3HMJG 4CXKA 1AUKA 4CXUA 1N2LA 4NKBA 5AJ9A 3LM3A 4CYSA 3LXQA 1E2TA 1E2SP 1P49A 3ED4A 1E3CP
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4N7V A;  4NKB A;  4NK7 A;  4N7Z A;  4G7N A;  4N9J A; 
#chains in the Genus database with same CATH topology
 4WHL A;  3KDR A;  4E67 A;  3C5L A;  3P36 A;  3BZI A;  4HAB A;  2I9X A;  4N9J A;  1A87 A;  5DAY A;  4O6W A;  4E9D A;  4YYP A;  2QZU A;  5DMV C;  4DFW A;  4CXS A;  3FVH A;  3P2Z A;  4CXU A;  4O56 A;  1E2S P;  1P49 A;  1E3C P;  4J7B B;  3P2W A;  4H5X A;  1Q4K A;  4O9W A;  1E1Z P;  1F34 B;  4NK7 A;  4FDJ A;  2UV8 G;  3GYV A;  4E9C A;  3Q1I A;  2E50 A;  4FDI A;  3RQ7 A;  2VKZ G;  3FS3 A;  2I9Z A;  4G7N A;  3HMJ G;  5AJ9 A;  3P35 A;  4LKM A;  1E2T A;  4X9R A;  4N7Z A;  4XB0 A;  4X9V A;  3HIH A;  4RS6 A;  5DMS A;  1FSU A;  4LKL A;  5LHZ A;  4H71 A;  4CYS A;  3LM3 A;  2N19 A;  4X9W A;  3HIK A;  4HCO A;  3ED4 A;  5DNJ A;  1F32 A;  4RCP A;  4WHK A;  1HDH A;  3P34 A;  2OJX A;  1UMW A;  3GYW A;  1N2K A;  4N7V A;  2OGQ A;  1E33 P;  5J19 A;  2IA9 A;  4WHH A;  4HY2 A;  3HFD A;  4CYR A;  1Q4O A;  4CXK A;  1AUK A;  3P37 A;  1N2L A;  4NKB A;  3LXQ A; 
#chains in the Genus database with same CATH homology
 3KDR A;  1HDH A;  4N7Z A;  4N9J A;  3GYW A;  1N2K A;  1E1Z P;  5DAY A;  4N7V A;  4NK7 A;  1E33 P;  2QZU A;  4FDJ A;  2UV8 G;  3GYV A;  2E50 A;  4FDI A;  3HFD A;  4CYR A;  2VKZ G;  4CXS A;  1FSU A;  3FS3 A;  4G7N A;  3HMJ G;  4CXK A;  1AUK A;  4CXU A;  1N2L A;  4NKB A;  5AJ9 A;  3LM3 A;  4CYS A;  3LXQ A;  1E2T A;  1E2S P;  1P49 A;  3ED4 A;  1E3C P; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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