4Q40A

Crystal structure of schistosoma mansoni arginase in complex with l-valine
Total Genus 132
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
132
sequence length
344
structure length
335
Chain Sequence
KLLYTSANFLGIPTNRGQPKIGTYQGPELIRKSNFFQLVAEDGIQLTDCGDIIPVELNEAEDPQRFGMKWSRSFSLTTLRIAERVEELMKQSNKSTPLVIVGGDHSMATGTILGHAEAKPDLCVLWIDAHGDINTPLNSASGNMHGMPLSFLVKELQDQIPWLDDFEGIKPCLNASNIAYIGLRDLDAHETHDIRKHGIAYFTMLDVDRMGIEAVIKEALLAVNPRLEKAIHLSFDIDALDPLVAPSTGTAVPGGLTLREGLRICEEVSATGKLSVVELAELNPLLGSQEDVLKTQSSAVHILRACLGHCRSGHLPFKVRNLTDQGIMSRAAHMQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Arginase
publication title Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis.
pubmed doi rcsb
source organism Schistosoma mansoni
total genus 132
structure length 335
sequence length 344
chains with identical sequence B, C, D
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2014-04-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4q40A00
3THEA 4Q42A 1P8NA 4HWWA 3NIQA 1P8PA 3KV2A 4G3HA 1HQXA 4IU1A 4Q41A 3NIOA 1TBHA 4Q3UA 4Q3QA 4IXUA 3CEVA 1ZPEA 1HQ5A 2RLAA 4Q40A 1HQGA 1T4SA 2PLLA 4DZ4A 4HZEA 4IE3A 3TH7A 1P8RA 1RLAA 4Q3RC 4GSVA 3LP4A 4GWDA 1R1OA 1HQHA 2CEVA 3MFWA 4IU0A 3NIPA 3LP7A 1P8SA 3GN0A 1P8OA 3DJ8A 4GWCA 4RHKA 2ZAVA 4Q3SA 1T4PA 4MXRA 2A0MA 4RHJA 3E6KA 3THJA 1T5GA 1T5FA 3F80A 1T4RA 4GSMA 1P8MA 1GQ6A 2AEBA 1GQ7A 4Q3RA 4IE2A 3SL1A 3SL0A 3MMRA 2PHAA 2EIVA 4GSZA 5HJAA 4Q3PA 3SKKA 3E8QA 4CEVA 4IXVA 4IU4A 2EF4A 1TBJA 3M1RA 1HQFA 4RHLA 4MYNA 1WOGA 1CEVA 1T4TA 3SJTA 1XFKA 4IU5A 3PZLA 5HJ9A 3LHLA 4FCKA 3THHA 4FCIA 4I06A 5RLAA 2PHOA 4RHMA 5CEVA 4RHIA 4RHQA 1WOHA 3E6VA 3MJLA 4Q3TA 1ZPGA 1PQ3A 4HXQA 3E8ZA 1WOIA 3E9BA 3MFVA 4RLAA 4MYLA 4IE1A 4MYKA 1TA1A 1P8QA 1TBLA 1WVAA 1D3VA 3RLAA 3GMZA 4MYFA 3TF3A 1WVBA 4ITYA 4Q3VA 2EF5A
chains in the Genus database with same CATH superfamily
5THVA 1ZZ0A 3C0ZA 4ZURA 5EEMA 3THEA 4BZ5A 4Q42A 1P8NA 5D1CA 4HWWA 3NIQA 1P8PA 2VQQA 3KV2A 4G3HA 1HQXA 4IU1A 4Q41A 1T69A 5FUEA 4QA3A 2VQVA 3NIOA 5G11A 1TBHA 4Q3UA 4Q3QA 5DC6A 1C3SA 4IXUA 5EFBD 3CEVA 5FCWA 1ZPEA 5EFGA 3EWFA 2RLAA 1HQ5A 2GH6A 4Q40A 4ZUOA 1HQGA 1T4SA 2PLLA 5DC5A 4DZ4A 4HZEA 4IE3A 3TH7A 3Q9EA 1P8RA 1RLAA 5G0HA 5G17A 4Q3RC 4CBYA 5G1CA 5DC8A 2VQMA 4GSVA 3LP4A 4GWDA 5BWZA 1R1OA 1HQHA 5D1BA 2CEVA 4LY1A 3MFWA 5EEKA 4IU0A 5EEFA 3NIPA 4LXZA 3LP7A 5EF7A 1P8SA 5THUA 3GN0A 1P8OA 3MZ4A 4ZUNA 3DJ8A 4GWCA 4RHKA 2ZAVA 5EEIA 4Q3SA 3MZ3A 1T4PA 4MXRA 5DC7A 3ZNRA 2A0MA 3EW8A 4RHJA 3C0YA 3MAXA 4QA2A 4ZUQA 3E6KA 2VQJA 4QA1A 3THJA 1ZZ1A 4ZUPA 1T5GA 4BZ6A 1T5FA 5G0YA 3F80A 1T4RA 4GSMA 5G12A 1C3PA 4QA5A 5IWGA 1P8MA 1GQ6A 2AEBA 1GQ7A 4Q3RA 5IX0A 3F0RA 4IE2A 3SL1A 4ZUMA 4QA4A 3SL0A 3MMRA 2PHAA 2EIVA 4GSZA 3Q9BA 5HJAA 4Q3PA 5G0JA 5A2SA 5EFJD 3SKKA 5EFNA 3E8QA 4CEVA 5LI3A 4IXVA 1W22A 4RN0A 4IU4A 5EF8A 2EF4A 1TBJA 5G0XA 3M1RA 1HQFA 4QA7A 4RHLA 4BZ8A 3MZ7A 4MYNA 2VQOA 4RN1A 3RQDA 5D1DA 1WOGA 1CEVA 1T4TA 3SJTA 1XFKA 2V5WA 4IU5A 5G0IA 3PZLA 4QA0A 5HJ9A 5G3WA 5THSA 3ZNSA 3Q9CA 3MENA 4BZ7A 3SFHA 3LHLA 4FCKA 5G0GA 4FCIA 4I06A 4QA6A 2PHOA 5RLAA 3THHA 5JI5A 2V5XA 4RHMA 5G10A 5CEVA 2VCGA 1C3RA 5EFHA 5G1BA 5G1AA 4RHIA 4RHQA 1WOHA 4RN2A 3E6VA 3EZPA 5EFKB 3MJLA 1VKGA 4Q3TA 4BZ9A 1ZPGA 1PQ3A 3SFFA 4HXQA 3F06A 3E8ZA 5THTA 1WOIA 4BKXB 3E9BA 3MFVA 1T67A 5EENA 3C10A 4A69A 1ZZ3A 1T64A 2VQWG 4MYLA 4RLAA 4IE1A 4MYKA 1TA1A 4CBTA 1P8QA 1TBLA 5ICNB 1WVAA 1D3VA 3RLAA 3GMZA 3F07A 4MYFA 4CQFA 3TF3A 3EZTA 1WVBA 5G13A 3Q9FA 3MZ6A 4ITYA 4Q3VA 2EF5A
chains in the Genus database with same CATH topology
3THEA 4Q42A 1P8NA 4HWWA 3NIQA 1P8PA 3KV2A 4G3HA 1HQXA 4IU1A 4Q41A 3NIOA 1TBHA 4Q3UA 4Q3QA 4IXUA 3CEVA 1ZPEA 1HQ5A 2RLAA 4Q40A 1HQGA 1T4SA 2PLLA 4DZ4A 4HZEA 4IE3A 3TH7A 1P8RA 1RLAA 4Q3RC 4GSVA 3LP4A 4GWDA 1R1OA 1HQHA 2CEVA 3MFWA 4IU0A 3NIPA 3LP7A 1P8SA 3GN0A 1P8OA 3DJ8A 4GWCA 4RHKA 2ZAVA 4Q3SA 1T4PA 4MXRA 2A0MA 4RHJA 3E6KA 3THJA 1T5GA 1T5FA 3F80A 1T4RA 4GSMA 1P8MA 1GQ6A 2AEBA 1GQ7A 4Q3RA 4IE2A 3SL1A 3SL0A 3MMRA 2PHAA 2EIVA 4GSZA 5HJAA 4Q3PA 3SKKA 3E8QA 4CEVA 4IXVA 4IU4A 2EF4A 1TBJA 3M1RA 1HQFA 4RHLA 4MYNA 1WOGA 1CEVA 1T4TA 3SJTA 1XFKA 4IU5A 3PZLA 5HJ9A 3LHLA 4FCKA 3THHA 4FCIA 4I06A 5RLAA 2PHOA 4RHMA 5CEVA 4RHIA 4RHQA 1WOHA 3E6VA 3MJLA 4Q3TA 1ZPGA 1PQ3A 4HXQA 3E8ZA 1WOIA 3E9BA 3MFVA 4RLAA 4MYLA 4IE1A 4MYKA 1TA1A 1P8QA 1TBLA 1WVAA 1D3VA 3RLAA 3GMZA 4MYFA 3TF3A 1WVBA 4ITYA 4Q3VA 2EF5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3THE A;  4Q42 A;  1P8N A;  4HWW A;  3NIQ A;  1P8P A;  3KV2 A;  4G3H A;  1HQX A;  4IU1 A;  4Q41 A;  3NIO A;  1TBH A;  4Q3U A;  4Q3Q A;  4IXU A;  3CEV A;  1ZPE A;  1HQ5 A;  2RLA A;  4Q40 A;  1HQG A;  1T4S A;  2PLL A;  4DZ4 A;  4HZE A;  4IE3 A;  3TH7 A;  1P8R A;  1RLA A;  4Q3R C;  4GSV A;  3LP4 A;  4GWD A;  1R1O A;  1HQH A;  2CEV A;  3MFW A;  4IU0 A;  3NIP A;  3LP7 A;  1P8S A;  3GN0 A;  1P8O A;  3DJ8 A;  4GWC A;  4RHK A;  2ZAV A;  4Q3S A;  1T4P A;  4MXR A;  2A0M A;  4RHJ A;  3E6K A;  3THJ A;  1T5G A;  1T5F A;  3F80 A;  1T4R A;  4GSM A;  1P8M A;  1GQ6 A;  2AEB A;  1GQ7 A;  4Q3R A;  4IE2 A;  3SL1 A;  3SL0 A;  3MMR A;  2PHA A;  2EIV A;  4GSZ A;  5HJA A;  4Q3P A;  3SKK A;  3E8Q A;  4CEV A;  4IXV A;  4IU4 A;  2EF4 A;  1TBJ A;  3M1R A;  1HQF A;  4RHL A;  4MYN A;  1WOG A;  1CEV A;  1T4T A;  3SJT A;  1XFK A;  4IU5 A;  3PZL A;  5HJ9 A;  3LHL A;  4FCK A;  3THH A;  4FCI A;  4I06 A;  5RLA A;  2PHO A;  4RHM A;  5CEV A;  4RHI A;  4RHQ A;  1WOH A;  3E6V A;  3MJL A;  4Q3T A;  1ZPG A;  1PQ3 A;  4HXQ A;  3E8Z A;  1WOI A;  3E9B A;  3MFV A;  4RLA A;  4MYL A;  4IE1 A;  4MYK A;  1TA1 A;  1P8Q A;  1TBL A;  1WVA A;  1D3V A;  3RLA A;  3GMZ A;  4MYF A;  3TF3 A;  1WVB A;  4ITY A;  4Q3V A;  2EF5 A; 
#chains in the Genus database with same CATH topology
 5THV A;  1ZZ0 A;  3C0Z A;  4ZUR A;  5EEM A;  3THE A;  4BZ5 A;  4Q42 A;  1P8N A;  5D1C A;  4HWW A;  3NIQ A;  1P8P A;  2VQQ A;  3KV2 A;  4G3H A;  1HQX A;  4IU1 A;  4Q41 A;  1T69 A;  5FUE A;  4QA3 A;  2VQV A;  3NIO A;  5G11 A;  1TBH A;  4Q3U A;  4Q3Q A;  5DC6 A;  1C3S A;  4IXU A;  5EFB D;  3CEV A;  5FCW A;  1ZPE A;  5EFG A;  3EWF A;  2RLA A;  1HQ5 A;  2GH6 A;  4Q40 A;  4ZUO A;  1HQG A;  1T4S A;  2PLL A;  5DC5 A;  4DZ4 A;  4HZE A;  4IE3 A;  3TH7 A;  3Q9E A;  1P8R A;  1RLA A;  5G0H A;  5G17 A;  4Q3R C;  4CBY A;  5G1C A;  5DC8 A;  2VQM A;  4GSV A;  3LP4 A;  4GWD A;  5BWZ A;  1R1O A;  1HQH A;  5D1B A;  2CEV A;  4LY1 A;  3MFW A;  5EEK A;  4IU0 A;  5EEF A;  3NIP A;  4LXZ A;  3LP7 A;  5EF7 A;  1P8S A;  5THU A;  3GN0 A;  1P8O A;  3MZ4 A;  4ZUN A;  3DJ8 A;  4GWC A;  4RHK A;  2ZAV A;  5EEI A;  4Q3S A;  3MZ3 A;  1T4P A;  4MXR A;  5DC7 A;  3ZNR A;  2A0M A;  3EW8 A;  4RHJ A;  3C0Y A;  3MAX A;  4QA2 A;  4ZUQ A;  3E6K A;  2VQJ A;  4QA1 A;  3THJ A;  1ZZ1 A;  4ZUP A;  1T5G A;  4BZ6 A;  1T5F A;  5G0Y A;  3F80 A;  1T4R A;  4GSM A;  5G12 A;  1C3P A;  4QA5 A;  5IWG A;  1P8M A;  1GQ6 A;  2AEB A;  1GQ7 A;  4Q3R A;  5IX0 A;  3F0R A;  4IE2 A;  3SL1 A;  4ZUM A;  4QA4 A;  3SL0 A;  3MMR A;  2PHA A;  2EIV A;  4GSZ A;  3Q9B A;  5HJA A;  4Q3P A;  5G0J A;  5A2S A;  5EFJ D;  3SKK A;  5EFN A;  3E8Q A;  4CEV A;  5LI3 A;  4IXV A;  1W22 A;  4RN0 A;  4IU4 A;  5EF8 A;  2EF4 A;  1TBJ A;  5G0X A;  3M1R A;  1HQF A;  4QA7 A;  4RHL A;  4BZ8 A;  3MZ7 A;  4MYN A;  2VQO A;  4RN1 A;  3RQD A;  5D1D A;  1WOG A;  1CEV A;  1T4T A;  3SJT A;  1XFK A;  2V5W A;  4IU5 A;  5G0I A;  3PZL A;  4QA0 A;  5HJ9 A;  5G3W A;  5THS A;  3ZNS A;  3Q9C A;  3MEN A;  4BZ7 A;  3SFH A;  3LHL A;  4FCK A;  5G0G A;  4FCI A;  4I06 A;  4QA6 A;  2PHO A;  5RLA A;  3THH A;  5JI5 A;  2V5X A;  4RHM A;  5G10 A;  5CEV A;  2VCG A;  1C3R A;  5EFH A;  5G1B A;  5G1A A;  4RHI A;  4RHQ A;  1WOH A;  4RN2 A;  3E6V A;  3EZP A;  5EFK B;  3MJL A;  1VKG A;  4Q3T A;  4BZ9 A;  1ZPG A;  1PQ3 A;  3SFF A;  4HXQ A;  3F06 A;  3E8Z A;  5THT A;  1WOI A;  4BKX B;  3E9B A;  3MFV A;  1T67 A;  5EEN A;  3C10 A;  4A69 A;  1ZZ3 A;  1T64 A;  2VQW G;  4MYL A;  4RLA A;  4IE1 A;  4MYK A;  1TA1 A;  4CBT A;  1P8Q A;  1TBL A;  5ICN B;  1WVA A;  1D3V A;  3RLA A;  3GMZ A;  3F07 A;  4MYF A;  4CQF A;  3TF3 A;  3EZT A;  1WVB A;  5G13 A;  3Q9F A;  3MZ6 A;  4ITY A;  4Q3V A;  2EF5 A; 
#chains in the Genus database with same CATH homology
 3THE A;  4Q42 A;  1P8N A;  4HWW A;  3NIQ A;  1P8P A;  3KV2 A;  4G3H A;  1HQX A;  4IU1 A;  4Q41 A;  3NIO A;  1TBH A;  4Q3U A;  4Q3Q A;  4IXU A;  3CEV A;  1ZPE A;  1HQ5 A;  2RLA A;  4Q40 A;  1HQG A;  1T4S A;  2PLL A;  4DZ4 A;  4HZE A;  4IE3 A;  3TH7 A;  1P8R A;  1RLA A;  4Q3R C;  4GSV A;  3LP4 A;  4GWD A;  1R1O A;  1HQH A;  2CEV A;  3MFW A;  4IU0 A;  3NIP A;  3LP7 A;  1P8S A;  3GN0 A;  1P8O A;  3DJ8 A;  4GWC A;  4RHK A;  2ZAV A;  4Q3S A;  1T4P A;  4MXR A;  2A0M A;  4RHJ A;  3E6K A;  3THJ A;  1T5G A;  1T5F A;  3F80 A;  1T4R A;  4GSM A;  1P8M A;  1GQ6 A;  2AEB A;  1GQ7 A;  4Q3R A;  4IE2 A;  3SL1 A;  3SL0 A;  3MMR A;  2PHA A;  2EIV A;  4GSZ A;  5HJA A;  4Q3P A;  3SKK A;  3E8Q A;  4CEV A;  4IXV A;  4IU4 A;  2EF4 A;  1TBJ A;  3M1R A;  1HQF A;  4RHL A;  4MYN A;  1WOG A;  1CEV A;  1T4T A;  3SJT A;  1XFK A;  4IU5 A;  3PZL A;  5HJ9 A;  3LHL A;  4FCK A;  3THH A;  4FCI A;  4I06 A;  5RLA A;  2PHO A;  4RHM A;  5CEV A;  4RHI A;  4RHQ A;  1WOH A;  3E6V A;  3MJL A;  4Q3T A;  1ZPG A;  1PQ3 A;  4HXQ A;  3E8Z A;  1WOI A;  3E9B A;  3MFV A;  4RLA A;  4MYL A;  4IE1 A;  4MYK A;  1TA1 A;  1P8Q A;  1TBL A;  1WVA A;  1D3V A;  3RLA A;  3GMZ A;  4MYF A;  3TF3 A;  1WVB A;  4ITY A;  4Q3V A;  2EF5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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