4Q5SA

Thermus thermophilus rna polymerase initially transcribing complex containing 6-mer rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
226
structure length
226
Chain Sequence
SKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/dna/rna
molecule keywords DNA-directed RNA polymerase subunit alpha
publication title Structural basis of transcription initiation by bacterial RNA polymerase holoenzyme.
pubmed doi rcsb
source organism Thermus thermophilus
total genus 41
structure length 226
sequence length 226
chains with identical sequence B
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2014-04-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4q5sA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4q5sA01
1TWCK 4A3FC 4AYBL 4MEYA 4BXXK 2WB1D 4BY7K 3GTMK 2R7ZK 2B63C 4A3JK 2NVTC 4A3KC 1TWHC 1TWGK 3H3VD 3S1QC 1XPPA 1K83C 4C3IC 4MQ9A 4YFKA 2NVQK 4X6AC 1SFOK 4A3BC 3S14K 3S1MK 3FKIC 4QJVA 3S15K 4LLGA 3S1RC 3S1NC 4ZH4A 4OIOA 2A6EA 5M3FK 4KN4A 3M3YK 2R93K 3PO3K 5TMCA 4C2MK 2JA5C 2WAQL 3S17K 4A93K 4Q4ZA 2NVXC 5FLMC 4BBSK 3K7AK 3GTLK 3HOZC 2E2JK 3M4OK 2NVYC 2PA8L 4OIQA 4QIWD 3RZOC 3GTOK 2A68A 4A3IC 2JA7C 3GTJK 5C4XC 4A3MK 4Y52C 2JA6K 1R9TC 4C3HK 3GTGK 3S16K 1IW7A 1I6VA 2E2HK 4KN7A 4XSXA 3HOWK 3GTKK 3S2DK 4G7ZA 3RZDK 3S2HK 5IYDK 4A3GK 4AYBD 1Y1VC 1TWAK 2PMZL 5IP7K 3I4MK 3I4NK 5C3EC 1SMYA 4JK1A 1WCMC 3HOUC 4XSZA 1HQMA 1Y1WK 1TWFC 3PO2K 4C3JC 5TMFA 4Y7NC 3FKIK 3GTPC 4XLPA 4Y52K 4OIRA 5C44C 4A3EC 3HOYC 5C4JK 2R92K 5IP9C 1I6HK 2JA8C 3GTQC 4A3DC 4BY1C 5IYBC 4A3LK 2A6HA 4BBRC 3HOXC 1I3QC 2A69A 4LJZA 3HOVC 2VUMC 3H0GC 1BDFA 3CQZC 2JA7K 4XLNA 5IYCC 1I50C 2WB1L 1TWCC 2YU9C 4MEXA 5M3MK 4A3FK 4BXXC 4BY7C 3WODA 3GTMC 2R7ZC 4YFNA 3H3VL 4A3JC 2B63K 4QJVB 2PMZD 1ZYRA 2NVTK 1TWGC 4NOIA 3HKZL 4A3KK 1TWHK 3S1QK 1K83K 4C3IK 2NVQC 2Y0SL 1SFOC 3S14C 4X6AK 3S1MC 3RZOK 4GZYA 3S15C 4A3BK 2BE5A 4KMUA 2O5JA 4YG2A 2R93C 4A3EK 3M3YC 3S1RK 3S1NK 5D4DA 4C2MC 3PO3C 4A93C 3S17C 4OIPA 2JA5K 5IYBK 3HOXK 4Q5SA 4QIWL 4BBSC 3K7AC 2E2IC 3GTLC 2E2JC 3M4OC 2WAQD 1I3QK 5FLMK 3H0GK 2NVXK 2VUMK 3HOZK 2NVYK 3GTOC 4A3MC 4A3CC 1I50K 3GTJC 4OINA 2JA6C 2O5IA 3GTGC 4C3HC 3S16C 2PA8D 5C4XK 4A3IK 3DXJA 2E2HC 3HOWC 4G7OA 1R9TK 2YU9K 1YNNA 3GTKC 5IYDC 3RZDC 3S2HC 3S2DC 4A3GC 1TWAC 3I4MC 3I4NC 5M5YK 5IP7C 1Y1VK 5C3EK 4LK0A 1WCMK 3HOUK 4A3CK 1Y1WC 3HKZD 3PO2C 5FJ8K 1TWFK 2CW0A 2Y0SD 4C3JK 4Y7NK 5M5XK 4YFXA 3GTPK 4LK1A 3EQLA 5C4JC 5C44K 2R92C 4G7HA 3HOYK 1I6HC 2PPBA 5IP9K 2JA8K 4A3LC 3GTQK 4A3DK 2E2IK 4BY1K 4BBRK 5M5WK 1YNJA 3HOVK 3CQZK 5IYCK
chains in the Genus database with same CATH superfamily
1TWCK 4MEYA 1TWAA 2WB1D 4KMHA 3GTMK 1VH2A 4A3JK 2XCQA 1EI6A 3H3VD 3S1QC 1B4BA 1K83C 4PABA 1Y1WA 4C3IC 2NVQK 1SFOK 4A3BC 3S14K 3FKIC 4QJVA 3S15K 3S1RC 5M3FK 5TMCA 4A93K 4WF9S 1V5VA 3S17K 2NVXC 4BBSK 3HOZC 2PA8L 3RZOC 1VJEA 4A3CK 3S16K 2L3UA 3HOWK 3A8JA 4G7ZA 1BGWA 1TWAK 1Y1VC 4WFNS 1VRQC 1SMYA 2V6TA 4BLBA 4GTLA 4XSZA 1ZQ1C 1Y1WK 4C3JC 3G4AA 4XLPA 4GTAA 3HOYC 1XXAA 3GTQC 4BY1C 1I3QA 3AQOA 2NVYA 1BDFA 2V6UA 1F9NA 4XLNA 2GSOA 1I50C 2YU9C 3AD8C 5M3MK 2GAHC 3GEIA 4BXXC 4YFNA 3T00A 2B63K 2JH3A 2PMZD 1DD5A 4NOIA 1O28A 1TWHK 1TWFA 2Y0SL 1J6VA 4WFAS 3GTPA 2O5JA 1FEUA 3L4JA 4A3EK 3M3YC 1UV7A 4KASA 3FHZA 5IYBK 4KDDA 3HOXK 3GTLC 1I3QK 2E2JC 5FLMK 2ZJPS 1O27A 3CQZA 2NVYK 3GTOC 2JA6C 3GTGC 4A3IK 2PA8D 4GFQA 5C4XK 4G7OA 1WSVA 3PIOS 3S2HC 1F7VA 3GEHA 3IPJA 1PJ6A 1TWGA 2V6SA 4LK0A 4KARA 2P5MA 3HOUK 2W7VA 4LOWA 1TWFK 3S0XA 2D6FC 4Y7NK 5DM7S 3GTPK 4LK1A 5JVHS 2XCRB 1X31C 5C44K 2R92C 4G7HA 2PHCB 1I6HC 2PPBA 4KAWX 5IP9K 4A3DK 4KB2A 4BBRK 1YX2A 3CQZK 3MMLB 5TJ3A 2ZJRS 5EGEA 3GTKA 1K83A 1XPPA 1TWGK 3AD7C 3FKIA 4X6AC 3GSIA 4J3NA 3N0CA 3S1MK 4LLGA 1PJ5A 4OIOA 2GSUA 3PO3K 4C2MK 1KQ4A 3A8KA 2JA5C 3K7AK 1EK8A 2KPUA 4OIQA 3TTGA 1WORA 2JA7C 1INNA 1O29A 3GTJK 3L4KA 4Y52C 4C3HK 3VA7A 1IW7A 1Y1VA 2Y3PA 3DLLS 3GTKK 5IYDK 3FOEA 2ZFZA 4A3GK 2PMZL 4P5AA 4P5BA 2ZUFA 3N0BA 1WCMC 1RU0A 3PO2K 4FZBA 1DCOA 3FOFA 1HI9A 3AH5A 3FKIK 4OIRA 3SZYA 4WJ4A 3GTQA 4GTCA 4A3LK 2RH6A 1WQFA 3BUEA 1I50A 2VUMC 2YU9A 2CFAA 1R9TA 1TWCC 4MEXA 4A3FK 3GTMC 4A3JC 1J98A 2NVTK 1IBAA 4A3KK 3SZZA 2ZUEA 2NVQC 4LQYA 1SFOC 3S14C 3S15C 2BE5A 1IQ0A 3CAGA 3S1NK 3PIPS 4A93C 3S17C 1VGXA 1USOA 4BBSC 4M1XA 1JOEA 4A3CC 1I50K 4OINA 3T01A 2YU9K 3S16C 4RMFA 1R9TK 3HOWC 2R7ZA 1TWAC 3BP8C 5C3EK 4XCHA 1GE9A 1VLOA 1Y1WC 2GAGC 4IOAS 2CW0A 1YCLA 1C0AA 1IS1A 5M5XK 2R93A 2R92A 3AQPA 4GT9A 4GTBA 1WSRA 2JA8K 1DCHA 5M5WK 1YNJA 3HOVK 1IE0A 3OREA 3G4CA 5IYCK 1O2FB 2E2HA 4BY7K 2ZJQS 2R7ZK 2B63C 4G0WA 5EGHA 1TWHC 1O2BA 1XZQB 4MQ9A 4YFKA 1ISEA 1BJTA 1XZPA 2R93K 2JA5A 2A6EA 2WAQL 5FLMC 3M4OK 2JA7A 2NVYC 5IOTA 4A3MK 4A3IC 5C4XC 1I6VA 2KQ1A 4KN7A 4XSXA 2E2HK 3S2DK 3RZDK 4AYBD 4WILA 1WCMA 3I4MK 5IP7K 3I4NK 3GIRA 3HOUC 4KC6A 1TWFC 4KB4A 1AB4A 4Y7NC 3GTPC 3TFIA 5C44C 5IOSA 5C4JK 4O2DA 1WQHA 3NUHA 5IP9C 2XCOA 4A3DC 2NVXA 2VUMA 4BBRC 1G51A 4WJ3M 4IO9S 3H0GC 3CQZC 1TWCA 2JA7K 4P9SA 4LR2A 3LPXA 3T02A 1EFWA 3WODA 4QJVB 1TWGC 3S1QK 1K83K 4C3IK 3AD9C 1XXBA 1IL2A 3S1MC 4GZYA 2CFAB 4A3BK 3S1RK 1PJ7A 3PO3C 4C2MC 4WFBS 4GTFA 4QIWL 3K7AC 2E2IC 2NVXK 2WAQD 4DDQA 2VUMK 3HOZK 3RZOK 3GTJC 2FQTA 4C3HC 3BP3A 1O24A 5IOQA 3ERED 3GTKC 5IYDC 5M5YK 4A3GC 5JFEA 1Y1VK 1O26A 3HKZD 5HL8A 3PO2C 4C3JK 4YFXA 3EQLA 3HOYK 1J6XA 1J6WA 3GTQK 4A3LC 4KATA 4BY1K 3GTLA 4WCES 3GTOA 3JSTA 2JA6A 3GTGA 1B4AA 4A3FC 2B63A 4AYBL 4BXXK 3OEPA 1TWHA 2NVTC 4A3KC 4FM9A 5IORA 1WOPA 3S1NC 4ZH4A 3M3YK 4KN4A 2P8TA 4G0VA 4Q4ZA 2KXYA 3LAPA 4IOCS 3GDZA 3V4GA 3GTLK 2E2JK 4U67S 4QIWD 3GTOK 2A68A 2JA6K 1XXCA 3GTGK 1R9TC 1EH1A 3S2HK 1XZPB 3N3YA 5C3EC 4JK1A 4KMAA 3HXAA 1HQMA 4PAAA 2KWAA 3CF5S 3GEEA 1BS2A 1DCPA 5TMFA 1WOSA 5CJ9A 5HQHA 4A3EC 2EBBA 1USMA 2R92K 1I6HK 2JA8C 4GTDA 5IYBC 1L0WA 2A6HA 3HOXC 3H0GA 1I3QC 2A69A 4LJZA 3HOVC 3ADAC 4KM9A 5JVGS 5IYCC 1WQGA 2WB1L 5L46A 4BY7C 2R7ZC 3H3VL 1ZYRA 3HKZL 3OPFA 1EQRA 3LAJA 4X6AK 2L5NA 4KMUA 3A8IA 3LYWA 4YG2A 5HL7S 2R93C 5E68A 5D4DA 1XZQA 4OIPA 4BKWA 3TFJA 1ZVUA 2GSNA 2JA5K 1F7UA 2E2IA 4Q5SA 3M4OC 1WIHA 3GTJA 3H0GK 1JQWA 1JVIA 4A3MC 2O5IA 1ZBSA 4KM8A 4Y52K 3DXJA 2E2HC 5DM6S 1O2AA 4C45A 1YNNA 3S2DC 3GTMA 3RZDC 3I4MC 3I4NC 5IP7C 3Q3QA 1WCMK 4GTEA 5CHPA 5FJ8K 4AH6A 4KMDA 1SFOA 2RGRA 2Y0SD 3TFHA 3QX3A 5C4JC 1WOOA 1ZXOA 4BLAA 1O25A 1F93A 5JVOA 2E2IK 2FQOA 4ILDA 4G0UA
chains in the Genus database with same CATH topology
1TWCK 4A3FC 4AYBL 4MEYA 4BXXK 2WB1D 4BY7K 3GTMK 2R7ZK 2B63C 4A3JK 2NVTC 4A3KC 1TWHC 1TWGK 3H3VD 3S1QC 1XPPA 1K83C 4C3IC 4MQ9A 4YFKA 2NVQK 4X6AC 1SFOK 4A3BC 3S14K 3S1MK 3FKIC 4QJVA 3S15K 4LLGA 3S1RC 3S1NC 4ZH4A 4OIOA 2A6EA 5M3FK 4KN4A 3M3YK 2R93K 3PO3K 5TMCA 4C2MK 2JA5C 2WAQL 3S17K 4A93K 4Q4ZA 2NVXC 5FLMC 4BBSK 3K7AK 3GTLK 3HOZC 2E2JK 3M4OK 2NVYC 2PA8L 4OIQA 4QIWD 3RZOC 3GTOK 2A68A 4A3IC 2JA7C 3GTJK 5C4XC 4A3MK 4Y52C 2JA6K 1R9TC 4C3HK 3GTGK 3S16K 1IW7A 1I6VA 2E2HK 4KN7A 4XSXA 3HOWK 3GTKK 3S2DK 4G7ZA 3RZDK 3S2HK 5IYDK 4A3GK 4AYBD 1Y1VC 1TWAK 2PMZL 5IP7K 3I4MK 3I4NK 5C3EC 1SMYA 4JK1A 1WCMC 3HOUC 4XSZA 1HQMA 1Y1WK 1TWFC 3PO2K 4C3JC 5TMFA 4Y7NC 3FKIK 3GTPC 4XLPA 4Y52K 4OIRA 5C44C 4A3EC 3HOYC 5C4JK 2R92K 5IP9C 1I6HK 2JA8C 3GTQC 4A3DC 4BY1C 5IYBC 4A3LK 2A6HA 4BBRC 3HOXC 1I3QC 2A69A 4LJZA 3HOVC 2VUMC 3H0GC 1BDFA 3CQZC 2JA7K 4XLNA 5IYCC 1I50C 2WB1L 1TWCC 2YU9C 4MEXA 5M3MK 4A3FK 4BXXC 4BY7C 3WODA 3GTMC 2R7ZC 4YFNA 3H3VL 4A3JC 2B63K 4QJVB 2PMZD 1ZYRA 2NVTK 1TWGC 4NOIA 3HKZL 4A3KK 1TWHK 3S1QK 1K83K 4C3IK 2NVQC 2Y0SL 1SFOC 3S14C 4X6AK 3S1MC 3RZOK 4GZYA 3S15C 4A3BK 2BE5A 4KMUA 2O5JA 4YG2A 2R93C 4A3EK 3M3YC 3S1RK 3S1NK 5D4DA 4C2MC 3PO3C 4A93C 3S17C 4OIPA 2JA5K 5IYBK 3HOXK 4Q5SA 4QIWL 4BBSC 3K7AC 2E2IC 3GTLC 2E2JC 3M4OC 2WAQD 1I3QK 5FLMK 3H0GK 2NVXK 2VUMK 3HOZK 2NVYK 3GTOC 4A3MC 4A3CC 1I50K 3GTJC 4OINA 2JA6C 2O5IA 3GTGC 4C3HC 3S16C 2PA8D 5C4XK 4A3IK 3DXJA 2E2HC 3HOWC 4G7OA 1R9TK 2YU9K 1YNNA 3GTKC 5IYDC 3RZDC 3S2HC 3S2DC 4A3GC 1TWAC 3I4MC 3I4NC 5M5YK 5IP7C 1Y1VK 5C3EK 4LK0A 1WCMK 3HOUK 4A3CK 1Y1WC 3HKZD 3PO2C 5FJ8K 1TWFK 2CW0A 2Y0SD 4C3JK 4Y7NK 5M5XK 4YFXA 3GTPK 4LK1A 3EQLA 5C4JC 5C44K 2R92C 4G7HA 3HOYK 1I6HC 2PPBA 5IP9K 2JA8K 4A3LC 3GTQK 4A3DK 2E2IK 4BY1K 4BBRK 5M5WK 1YNJA 3HOVK 3CQZK 5IYCK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWC K;  4A3F C;  4AYB L;  4MEY A;  4BXX K;  2WB1 D;  4BY7 K;  3GTM K;  2R7Z K;  2B63 C;  4A3J K;  2NVT C;  4A3K C;  1TWH C;  1TWG K;  3H3V D;  3S1Q C;  1XPP A;  1K83 C;  4C3I C;  4MQ9 A;  4YFK A;  2NVQ K;  4X6A C;  1SFO K;  4A3B C;  3S14 K;  3S1M K;  3FKI C;  4QJV A;  3S15 K;  4LLG A;  3S1R C;  3S1N C;  4ZH4 A;  4OIO A;  2A6E A;  5M3F K;  4KN4 A;  3M3Y K;  2R93 K;  3PO3 K;  5TMC A;  4C2M K;  2JA5 C;  2WAQ L;  3S17 K;  4A93 K;  4Q4Z A;  2NVX C;  5FLM C;  4BBS K;  3K7A K;  3GTL K;  3HOZ C;  2E2J K;  3M4O K;  2NVY C;  2PA8 L;  4OIQ A;  4QIW D;  3RZO C;  3GTO K;  2A68 A;  4A3I C;  2JA7 C;  3GTJ K;  5C4X C;  4A3M K;  4Y52 C;  2JA6 K;  1R9T C;  4C3H K;  3GTG K;  3S16 K;  1IW7 A;  1I6V A;  2E2H K;  4KN7 A;  4XSX A;  3HOW K;  3GTK K;  3S2D K;  4G7Z A;  3RZD K;  3S2H K;  5IYD K;  4A3G K;  4AYB D;  1Y1V C;  1TWA K;  2PMZ L;  5IP7 K;  3I4M K;  3I4N K;  5C3E C;  1SMY A;  4JK1 A;  1WCM C;  3HOU C;  4XSZ A;  1HQM A;  1Y1W K;  1TWF C;  3PO2 K;  4C3J C;  5TMF A;  4Y7N C;  3FKI K;  3GTP C;  4XLP A;  4Y52 K;  4OIR A;  5C44 C;  4A3E C;  3HOY C;  5C4J K;  2R92 K;  5IP9 C;  1I6H K;  2JA8 C;  3GTQ C;  4A3D C;  4BY1 C;  5IYB C;  4A3L K;  2A6H A;  4BBR C;  3HOX C;  1I3Q C;  2A69 A;  4LJZ A;  3HOV C;  2VUM C;  3H0G C;  1BDF A;  3CQZ C;  2JA7 K;  4XLN A;  5IYC C;  1I50 C;  2WB1 L;  1TWC C;  2YU9 C;  4MEX A;  5M3M K;  4A3F K;  4BXX C;  4BY7 C;  3WOD A;  3GTM C;  2R7Z C;  4YFN A;  3H3V L;  4A3J C;  2B63 K;  4QJV B;  2PMZ D;  1ZYR A;  2NVT K;  1TWG C;  4NOI A;  3HKZ L;  4A3K K;  1TWH K;  3S1Q K;  1K83 K;  4C3I K;  2NVQ C;  2Y0S L;  1SFO C;  3S14 C;  4X6A K;  3S1M C;  3RZO K;  4GZY A;  3S15 C;  4A3B K;  2BE5 A;  4KMU A;  2O5J A;  4YG2 A;  2R93 C;  4A3E K;  3M3Y C;  3S1R K;  3S1N K;  5D4D A;  4C2M C;  3PO3 C;  4A93 C;  3S17 C;  4OIP A;  2JA5 K;  5IYB K;  3HOX K;  4Q5S A;  4QIW L;  4BBS C;  3K7A C;  2E2I C;  3GTL C;  2E2J C;  3M4O C;  2WAQ D;  1I3Q K;  5FLM K;  3H0G K;  2NVX K;  2VUM K;  3HOZ K;  2NVY K;  3GTO C;  4A3M C;  4A3C C;  1I50 K;  3GTJ C;  4OIN A;  2JA6 C;  2O5I A;  3GTG C;  4C3H C;  3S16 C;  2PA8 D;  5C4X K;  4A3I K;  3DXJ A;  2E2H C;  3HOW C;  4G7O A;  1R9T K;  2YU9 K;  1YNN A;  3GTK C;  5IYD C;  3RZD C;  3S2H C;  3S2D C;  4A3G C;  1TWA C;  3I4M C;  3I4N C;  5M5Y K;  5IP7 C;  1Y1V K;  5C3E K;  4LK0 A;  1WCM K;  3HOU K;  4A3C K;  1Y1W C;  3HKZ D;  3PO2 C;  5FJ8 K;  1TWF K;  2CW0 A;  2Y0S D;  4C3J K;  4Y7N K;  5M5X K;  4YFX A;  3GTP K;  4LK1 A;  3EQL A;  5C4J C;  5C44 K;  2R92 C;  4G7H A;  3HOY K;  1I6H C;  2PPB A;  5IP9 K;  2JA8 K;  4A3L C;  3GTQ K;  4A3D K;  2E2I K;  4BY1 K;  4BBR K;  5M5W K;  1YNJ A;  3HOV K;  3CQZ K;  5IYC K; 
#chains in the Genus database with same CATH topology
 1TWC K;  4MEY A;  1TWA A;  2WB1 D;  4KMH A;  3GTM K;  1VH2 A;  4A3J K;  2XCQ A;  1EI6 A;  3H3V D;  3S1Q C;  1B4B A;  1K83 C;  4PAB A;  1Y1W A;  4C3I C;  2NVQ K;  1SFO K;  4A3B C;  3S14 K;  3FKI C;  4QJV A;  3S15 K;  3S1R C;  5M3F K;  5TMC A;  4A93 K;  4WF9 S;  1V5V A;  3S17 K;  2NVX C;  4BBS K;  3HOZ C;  2PA8 L;  3RZO C;  1VJE A;  4A3C K;  3S16 K;  2L3U A;  3HOW K;  3A8J A;  4G7Z A;  1BGW A;  1TWA K;  1Y1V C;  4WFN S;  1VRQ C;  1SMY A;  2V6T A;  4BLB A;  4GTL A;  4XSZ A;  1ZQ1 C;  1Y1W K;  4C3J C;  3G4A A;  4XLP A;  4GTA A;  3HOY C;  1XXA A;  3GTQ C;  4BY1 C;  1I3Q A;  3AQO A;  2NVY A;  1BDF A;  2V6U A;  1F9N A;  4XLN A;  2GSO A;  1I50 C;  2YU9 C;  3AD8 C;  5M3M K;  2GAH C;  3GEI A;  4BXX C;  4YFN A;  3T00 A;  2B63 K;  2JH3 A;  2PMZ D;  1DD5 A;  4NOI A;  1O28 A;  1TWH K;  1TWF A;  2Y0S L;  1J6V A;  4WFA S;  3GTP A;  2O5J A;  1FEU A;  3L4J A;  4A3E K;  3M3Y C;  1UV7 A;  4KAS A;  3FHZ A;  5IYB K;  4KDD A;  3HOX K;  3GTL C;  1I3Q K;  2E2J C;  5FLM K;  2ZJP S;  1O27 A;  3CQZ A;  2NVY K;  3GTO C;  2JA6 C;  3GTG C;  4A3I K;  2PA8 D;  4GFQ A;  5C4X K;  4G7O A;  1WSV A;  3PIO S;  3S2H C;  1F7V A;  3GEH A;  3IPJ A;  1PJ6 A;  1TWG A;  2V6S A;  4LK0 A;  4KAR A;  2P5M A;  3HOU K;  2W7V A;  4LOW A;  1TWF K;  3S0X A;  2D6F C;  4Y7N K;  5DM7 S;  3GTP K;  4LK1 A;  5JVH S;  2XCR B;  1X31 C;  5C44 K;  2R92 C;  4G7H A;  2PHC B;  1I6H C;  2PPB A;  4KAW X;  5IP9 K;  4A3D K;  4KB2 A;  4BBR K;  1YX2 A;  3CQZ K;  3MML B;  5TJ3 A;  2ZJR S;  5EGE A;  3GTK A;  1K83 A;  1XPP A;  1TWG K;  3AD7 C;  3FKI A;  4X6A C;  3GSI A;  4J3N A;  3N0C A;  3S1M K;  4LLG A;  1PJ5 A;  4OIO A;  2GSU A;  3PO3 K;  4C2M K;  1KQ4 A;  3A8K A;  2JA5 C;  3K7A K;  1EK8 A;  2KPU A;  4OIQ A;  3TTG A;  1WOR A;  2JA7 C;  1INN A;  1O29 A;  3GTJ K;  3L4K A;  4Y52 C;  4C3H K;  3VA7 A;  1IW7 A;  1Y1V A;  2Y3P A;  3DLL S;  3GTK K;  5IYD K;  3FOE A;  2ZFZ A;  4A3G K;  2PMZ L;  4P5A A;  4P5B A;  2ZUF A;  3N0B A;  1WCM C;  1RU0 A;  3PO2 K;  4FZB A;  1DCO A;  3FOF A;  1HI9 A;  3AH5 A;  3FKI K;  4OIR A;  3SZY A;  4WJ4 A;  3GTQ A;  4GTC A;  4A3L K;  2RH6 A;  1WQF A;  3BUE A;  1I50 A;  2VUM C;  2YU9 A;  2CFA A;  1R9T A;  1TWC C;  4MEX A;  4A3F K;  3GTM C;  4A3J C;  1J98 A;  2NVT K;  1IBA A;  4A3K K;  3SZZ A;  2ZUE A;  2NVQ C;  4LQY A;  1SFO C;  3S14 C;  3S15 C;  2BE5 A;  1IQ0 A;  3CAG A;  3S1N K;  3PIP S;  4A93 C;  3S17 C;  1VGX A;  1USO A;  4BBS C;  4M1X A;  1JOE A;  4A3C C;  1I50 K;  4OIN A;  3T01 A;  2YU9 K;  3S16 C;  4RMF A;  1R9T K;  3HOW C;  2R7Z A;  1TWA C;  3BP8 C;  5C3E K;  4XCH A;  1GE9 A;  1VLO A;  1Y1W C;  2GAG C;  4IOA S;  2CW0 A;  1YCL A;  1C0A A;  1IS1 A;  5M5X K;  2R93 A;  2R92 A;  3AQP A;  4GT9 A;  4GTB A;  1WSR A;  2JA8 K;  1DCH A;  5M5W K;  1YNJ A;  3HOV K;  1IE0 A;  3ORE A;  3G4C A;  5IYC K;  1O2F B;  2E2H A;  4BY7 K;  2ZJQ S;  2R7Z K;  2B63 C;  4G0W A;  5EGH A;  1TWH C;  1O2B A;  1XZQ B;  4MQ9 A;  4YFK A;  1ISE A;  1BJT A;  1XZP A;  2R93 K;  2JA5 A;  2A6E A;  2WAQ L;  5FLM C;  3M4O K;  2JA7 A;  2NVY C;  5IOT A;  4A3M K;  4A3I C;  5C4X C;  1I6V A;  2KQ1 A;  4KN7 A;  4XSX A;  2E2H K;  3S2D K;  3RZD K;  4AYB D;  4WIL A;  1WCM A;  3I4M K;  5IP7 K;  3I4N K;  3GIR A;  3HOU C;  4KC6 A;  1TWF C;  4KB4 A;  1AB4 A;  4Y7N C;  3GTP C;  3TFI A;  5C44 C;  5IOS A;  5C4J K;  4O2D A;  1WQH A;  3NUH A;  5IP9 C;  2XCO A;  4A3D C;  2NVX A;  2VUM A;  4BBR C;  1G51 A;  4WJ3 M;  4IO9 S;  3H0G C;  3CQZ C;  1TWC A;  2JA7 K;  4P9S A;  4LR2 A;  3LPX A;  3T02 A;  1EFW A;  3WOD A;  4QJV B;  1TWG C;  3S1Q K;  1K83 K;  4C3I K;  3AD9 C;  1XXB A;  1IL2 A;  3S1M C;  4GZY A;  2CFA B;  4A3B K;  3S1R K;  1PJ7 A;  3PO3 C;  4C2M C;  4WFB S;  4GTF A;  4QIW L;  3K7A C;  2E2I C;  2NVX K;  2WAQ D;  4DDQ A;  2VUM K;  3HOZ K;  3RZO K;  3GTJ C;  2FQT A;  4C3H C;  3BP3 A;  1O24 A;  5IOQ A;  3ERE D;  3GTK C;  5IYD C;  5M5Y K;  4A3G C;  5JFE A;  1Y1V K;  1O26 A;  3HKZ D;  5HL8 A;  3PO2 C;  4C3J K;  4YFX A;  3EQL A;  3HOY K;  1J6X A;  1J6W A;  3GTQ K;  4A3L C;  4KAT A;  4BY1 K;  3GTL A;  4WCE S;  3GTO A;  3JST A;  2JA6 A;  3GTG A;  1B4A A;  4A3F C;  2B63 A;  4AYB L;  4BXX K;  3OEP A;  1TWH A;  2NVT C;  4A3K C;  4FM9 A;  5IOR A;  1WOP A;  3S1N C;  4ZH4 A;  3M3Y K;  4KN4 A;  2P8T A;  4G0V A;  4Q4Z A;  2KXY A;  3LAP A;  4IOC S;  3GDZ A;  3V4G A;  3GTL K;  2E2J K;  4U67 S;  4QIW D;  3GTO K;  2A68 A;  2JA6 K;  1XXC A;  3GTG K;  1R9T C;  1EH1 A;  3S2H K;  1XZP B;  3N3Y A;  5C3E C;  4JK1 A;  4KMA A;  3HXA A;  1HQM A;  4PAA A;  2KWA A;  3CF5 S;  3GEE A;  1BS2 A;  1DCP A;  5TMF A;  1WOS A;  5CJ9 A;  5HQH A;  4A3E C;  2EBB A;  1USM A;  2R92 K;  1I6H K;  2JA8 C;  4GTD A;  5IYB C;  1L0W A;  2A6H A;  3HOX C;  3H0G A;  1I3Q C;  2A69 A;  4LJZ A;  3HOV C;  3ADA C;  4KM9 A;  5JVG S;  5IYC C;  1WQG A;  2WB1 L;  5L46 A;  4BY7 C;  2R7Z C;  3H3V L;  1ZYR A;  3HKZ L;  3OPF A;  1EQR A;  3LAJ A;  4X6A K;  2L5N A;  4KMU A;  3A8I A;  3LYW A;  4YG2 A;  5HL7 S;  2R93 C;  5E68 A;  5D4D A;  1XZQ A;  4OIP A;  4BKW A;  3TFJ A;  1ZVU A;  2GSN A;  2JA5 K;  1F7U A;  2E2I A;  4Q5S A;  3M4O C;  1WIH A;  3GTJ A;  3H0G K;  1JQW A;  1JVI A;  4A3M C;  2O5I A;  1ZBS A;  4KM8 A;  4Y52 K;  3DXJ A;  2E2H C;  5DM6 S;  1O2A A;  4C45 A;  1YNN A;  3S2D C;  3GTM A;  3RZD C;  3I4M C;  3I4N C;  5IP7 C;  3Q3Q A;  1WCM K;  4GTE A;  5CHP A;  5FJ8 K;  4AH6 A;  4KMD A;  1SFO A;  2RGR A;  2Y0S D;  3TFH A;  3QX3 A;  5C4J C;  1WOO A;  1ZXO A;  4BLA A;  1O25 A;  1F93 A;  5JVO A;  2E2I K;  2FQO A;  4ILD A;  4G0U A; 
#chains in the Genus database with same CATH homology
 1TWC K;  4A3F C;  4AYB L;  4MEY A;  4BXX K;  2WB1 D;  4BY7 K;  3GTM K;  2R7Z K;  2B63 C;  4A3J K;  2NVT C;  4A3K C;  1TWH C;  1TWG K;  3H3V D;  3S1Q C;  1XPP A;  1K83 C;  4C3I C;  4MQ9 A;  4YFK A;  2NVQ K;  4X6A C;  1SFO K;  4A3B C;  3S14 K;  3S1M K;  3FKI C;  4QJV A;  3S15 K;  4LLG A;  3S1R C;  3S1N C;  4ZH4 A;  4OIO A;  2A6E A;  5M3F K;  4KN4 A;  3M3Y K;  2R93 K;  3PO3 K;  5TMC A;  4C2M K;  2JA5 C;  2WAQ L;  3S17 K;  4A93 K;  4Q4Z A;  2NVX C;  5FLM C;  4BBS K;  3K7A K;  3GTL K;  3HOZ C;  2E2J K;  3M4O K;  2NVY C;  2PA8 L;  4OIQ A;  4QIW D;  3RZO C;  3GTO K;  2A68 A;  4A3I C;  2JA7 C;  3GTJ K;  5C4X C;  4A3M K;  4Y52 C;  2JA6 K;  1R9T C;  4C3H K;  3GTG K;  3S16 K;  1IW7 A;  1I6V A;  2E2H K;  4KN7 A;  4XSX A;  3HOW K;  3GTK K;  3S2D K;  4G7Z A;  3RZD K;  3S2H K;  5IYD K;  4A3G K;  4AYB D;  1Y1V C;  1TWA K;  2PMZ L;  5IP7 K;  3I4M K;  3I4N K;  5C3E C;  1SMY A;  4JK1 A;  1WCM C;  3HOU C;  4XSZ A;  1HQM A;  1Y1W K;  1TWF C;  3PO2 K;  4C3J C;  5TMF A;  4Y7N C;  3FKI K;  3GTP C;  4XLP A;  4Y52 K;  4OIR A;  5C44 C;  4A3E C;  3HOY C;  5C4J K;  2R92 K;  5IP9 C;  1I6H K;  2JA8 C;  3GTQ C;  4A3D C;  4BY1 C;  5IYB C;  4A3L K;  2A6H A;  4BBR C;  3HOX C;  1I3Q C;  2A69 A;  4LJZ A;  3HOV C;  2VUM C;  3H0G C;  1BDF A;  3CQZ C;  2JA7 K;  4XLN A;  5IYC C;  1I50 C;  2WB1 L;  1TWC C;  2YU9 C;  4MEX A;  5M3M K;  4A3F K;  4BXX C;  4BY7 C;  3WOD A;  3GTM C;  2R7Z C;  4YFN A;  3H3V L;  4A3J C;  2B63 K;  4QJV B;  2PMZ D;  1ZYR A;  2NVT K;  1TWG C;  4NOI A;  3HKZ L;  4A3K K;  1TWH K;  3S1Q K;  1K83 K;  4C3I K;  2NVQ C;  2Y0S L;  1SFO C;  3S14 C;  4X6A K;  3S1M C;  3RZO K;  4GZY A;  3S15 C;  4A3B K;  2BE5 A;  4KMU A;  2O5J A;  4YG2 A;  2R93 C;  4A3E K;  3M3Y C;  3S1R K;  3S1N K;  5D4D A;  4C2M C;  3PO3 C;  4A93 C;  3S17 C;  4OIP A;  2JA5 K;  5IYB K;  3HOX K;  4Q5S A;  4QIW L;  4BBS C;  3K7A C;  2E2I C;  3GTL C;  2E2J C;  3M4O C;  2WAQ D;  1I3Q K;  5FLM K;  3H0G K;  2NVX K;  2VUM K;  3HOZ K;  2NVY K;  3GTO C;  4A3M C;  4A3C C;  1I50 K;  3GTJ C;  4OIN A;  2JA6 C;  2O5I A;  3GTG C;  4C3H C;  3S16 C;  2PA8 D;  5C4X K;  4A3I K;  3DXJ A;  2E2H C;  3HOW C;  4G7O A;  1R9T K;  2YU9 K;  1YNN A;  3GTK C;  5IYD C;  3RZD C;  3S2H C;  3S2D C;  4A3G C;  1TWA C;  3I4M C;  3I4N C;  5M5Y K;  5IP7 C;  1Y1V K;  5C3E K;  4LK0 A;  1WCM K;  3HOU K;  4A3C K;  1Y1W C;  3HKZ D;  3PO2 C;  5FJ8 K;  1TWF K;  2CW0 A;  2Y0S D;  4C3J K;  4Y7N K;  5M5X K;  4YFX A;  3GTP K;  4LK1 A;  3EQL A;  5C4J C;  5C44 K;  2R92 C;  4G7H A;  3HOY K;  1I6H C;  2PPB A;  5IP9 K;  2JA8 K;  4A3L C;  3GTQ K;  4A3D K;  2E2I K;  4BY1 K;  4BBR K;  5M5W K;  1YNJ A;  3HOV K;  3CQZ K;  5IYC K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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