4QNCA

Crystal structure of a semisweet in an occluded state
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
81
structure length
81
Chain Sequence
MENLIGYVAAFLTTVSFLPQVLRVVMTKQTRDISRNMYIMFFLGVVLWFVYGILRSDLPIILANVVTLFFVTIILYYKLTE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords chemical transport protein
publication title Structures of bacterial homologues of SWEET transporters in two distinct conformations.
pubmed doi rcsb
source organism Leptospira biflexa serovar patoc
total genus 32
structure length 81
sequence length 81
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04193 PQ-loop PQ loop repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.290 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 4qncA00
4QNCA 4RNGA 4QNDA 4X5MA 4X5NA
chains in the Genus database with same CATH superfamily
1IG9A 4KHNA 3CFOA 1XL3C 3RWUA 2H4TA 3CQ8A 1XMGE 4FJLA 3E4YA 1FXXA 1CLQA 2VIXA 2P1MB 1FZ9E 2PFVA 3CFPA 3SPYA 4RG8A 4J2DA 4FJNA 5H37A 3MKSB 3LZIA 4FJ9A 1XVGE 4JRQA 3SUOA 1FZ4E 3TAFA 4DTJA 2JQTA 3L2OB 1XVFE 2RKHA 1MHZG 3L8BA 3TAEA 4M3XA 3TAGA 3QEWA 4FJ5A 3LDBA 4M3YA 4HCBA 3QEXA 3TABA 4M3RA 1FZ5E 3LDSA 1FZ3E 4DTOA 2JH8A 2HD0A 2RCUA 4FJKA 3OGLB 4FJ8A 3SPZA 3SUPA 4KHQA 2P1QB 3K2OA 1FZ7E 2FYOA 2OVPB 3RMDA 3S9HA 2OYQA 3C6PB 4QNDA 4DU3A 2JPNA 2YB5A 1FZ2E 3J2PA 4DTPA 1P22A 3HP9A 2LF6A 3QESA 4J2EA 1FZ8E 3BVOA 1FZ1E 4DTSA 4B08A 4EP9A 4DTMA 3SQ2A 4AKIA 4AKHA 3SUQA 4X5NA 5IZ7A 2DY4A 4AI6A 4FVMA 4FJ7A 4KI4A 2B7MA 4M3UA 4DTUA 2JHPA 3C95A 4IT5A 1MHYG 2E31A 1FZ0E 3LD8A 3WSOA 1FS1A 2MMBA 1XVDE 4ADNA 4FK2A 4M3ZA 3NGIA 3UO2A 4EPHA 3QEPA 4HCCA 3SQ1A 3E4WA 3L0MA 2OZMA 3L1NA 2OVRB 3N1BA 1FPOA 1XVBE 4RL5A 2DEBA 3SUNA 4E4BA 4KHSA 2DTUA 2MW2A 1XVCE 3TJYA 2OVQB 3NHGA 1FZHE 3HGLA 3SQ4A 4FJJA 1IH7A 1LDKE 1WAFA 2P1PB 2B8IA 3UO3A 2JHAA 4DTRA 1Q9YA 4I6JB 4J2BA 4KI6A 3C6NB 4J2AA 4X5MA 2B1EA 3QNOA 3SQ0A 2OZSA 1FYZE 1XU5E 5IBKB 5IREA 2PFTA 2FW3A 4RNGA 2JH9A 4ICGC 2P1NB 3LZJA 4QNCA 3SNNA 4AKGA 2E32A 3OGMB 1FZIE 2P5OA 2VJ4A 1MMOG 3RMAA 1MTYG 4GAMC 4DU1A 4DTXA 3J27A 3KD1E 4FK0A 3RMBA 3KD5E 4FJIA 4FJXA 3C6OB 2QXFA 3QEVA 2K5SA 4JS4A 3QERA 4KHUA 2VJ5A 3QNNA 4M42A 3OGKB 2ATQA 3HL8A 1JW2A 3SCXA 4EYWA 1FZ6E 3NE6A 3QEIA 3TL8B 3SJJA 4M41A 3V7DB 3UIQA 3NDKA 1WAJA 4JS5A 4FJGA 1N1CA 3C94A 2JHCA 1XVEE 1Q9XA 4I9LA 4FK4A 2LF3A 4FJMA 3HGKE 1XMHE 3QETA 1XU3E 4ADOA 4FJHA 4KHYA 3SI6A 3CFRA 4DU4A 4DTNA 4M3WA 3RMCA 3NAEA 4JRPA 3SVIA 4E3SA 4M3TA 2MZWB 4M45A 3N1EA 3NCIA 2P1OB 1NEXB 2P5GA 4KHWA 4I9QA 1XMFE
chains in the Genus database with same CATH topology
1IG9A 4KHNA 3CFOA 1XL3C 3RWUA 2H4TA 3CQ8A 1XMGE 4FJLA 3E4YA 1FXXA 1CLQA 2VIXA 2P1MB 1FZ9E 2PFVA 3CFPA 3SPYA 4RG8A 4J2DA 4FJNA 5H37A 3MKSB 3LZIA 4FJ9A 1XVGE 4JRQA 3SUOA 1FZ4E 3TAFA 4DTJA 3L2OB 1XVFE 3L8BA 1MHZG 3TAEA 4M3XA 3TAGA 3QEWA 4FJ5A 3LDBA 4M3YA 4HCBA 3QEXA 3TABA 4M3RA 1FZ5E 3LDSA 1FZ3E 4DTOA 2JH8A 2HD0A 2RCUA 4FJKA 3OGLB 4FJ8A 3SPZA 3SUPA 4KHQA 2P1QB 3K2OA 1FZ7E 2FYOA 2OVPB 3RMDA 3S9HA 2OYQA 3C6PB 4QNDA 4DU3A 2JPNA 2YB5A 1FZ2E 3J2PA 4DTPA 1P22A 3HP9A 2LF6A 3QESA 4J2EA 1FZ8E 4DTSA 1FZ1E 4DTMA 4B08A 4EP9A 4AKIA 3SQ2A 4AKHA 4AI6A 3SUQA 4X5NA 5IZ7A 2DY4A 4FVMA 4FJ7A 4KI4A 2B7MA 4M3UA 4DTUA 2JHPA 3C95A 1MHYG 2E31A 1FZ0E 3LD8A 3WSOA 1FS1A 2MMBA 1XVDE 4ADNA 4FK2A 4M3ZA 3NGIA 4EPHA 3QEPA 4HCCA 3SQ1A 3E4WA 3L0MA 2OZMA 3L1NA 2OVRB 3N1BA 4KHSA 1XVBE 4RL5A 2DEBA 3SUNA 4E4BA 2DTUA 1XVCE 3TJYA 2OVQB 3NHGA 1FZHE 3HGLA 3SQ4A 4FJJA 1IH7A 1LDKE 1WAFA 2P1PB 2B8IA 2JHAA 4DTRA 1Q9YA 4I6JB 4J2BA 4KI6A 3C6NB 4J2AA 4X5MA 2B1EA 3QNOA 3SQ0A 2OZSA 1FYZE 1XU5E 5IBKB 5IREA 2PFTA 2FW3A 4RNGA 2JH9A 2P1NB 3LZJA 4QNCA 3SNNA 4AKGA 2E32A 3OGMB 1FZIE 2P5OA 2VJ4A 1MMOG 3RMAA 1MTYG 4GAMC 4DU1A 4DTXA 3J27A 3KD1E 4FK0A 3RMBA 3KD5E 4FJIA 4FJXA 3C6OB 2QXFA 3QEVA 3QERA 4JS4A 4KHUA 2VJ5A 3QNNA 4M42A 3OGKB 2ATQA 3HL8A 3SCXA 4EYWA 1FZ6E 3NE6A 3QEIA 3TL8B 3SJJA 4M41A 3V7DB 3UIQA 3NDKA 1WAJA 4JS5A 4FJGA 3C94A 1Q9XA 2JHCA 1XVEE 4I9LA 4FK4A 2LF3A 4FJMA 3HGKE 1XMHE 3QETA 1XU3E 4ADOA 4FJHA 4KHYA 3SI6A 3CFRA 4DU4A 4DTNA 4M3WA 3RMCA 3NAEA 4JRPA 3SVIA 4E3SA 4M3TA 2MZWB 4M45A 3N1EA 3NCIA 2P1OB 1NEXB 2P5GA 4KHWA 4I9QA 1XMFE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QNC A;  4RNG A;  4QND A;  4X5M A;  4X5N A; 
#chains in the Genus database with same CATH topology
 1IG9 A;  4KHN A;  3CFO A;  1XL3 C;  3RWU A;  2H4T A;  3CQ8 A;  1XMG E;  4FJL A;  3E4Y A;  1FXX A;  1CLQ A;  2VIX A;  2P1M B;  1FZ9 E;  2PFV A;  3CFP A;  3SPY A;  4RG8 A;  4J2D A;  4FJN A;  5H37 A;  3MKS B;  3LZI A;  4FJ9 A;  1XVG E;  4JRQ A;  3SUO A;  1FZ4 E;  3TAF A;  4DTJ A;  2JQT A;  3L2O B;  1XVF E;  2RKH A;  1MHZ G;  3L8B A;  3TAE A;  4M3X A;  3TAG A;  3QEW A;  4FJ5 A;  3LDB A;  4M3Y A;  4HCB A;  3QEX A;  3TAB A;  4M3R A;  1FZ5 E;  3LDS A;  1FZ3 E;  4DTO A;  2JH8 A;  2HD0 A;  2RCU A;  4FJK A;  3OGL B;  4FJ8 A;  3SPZ A;  3SUP A;  4KHQ A;  2P1Q B;  3K2O A;  1FZ7 E;  2FYO A;  2OVP B;  3RMD A;  3S9H A;  2OYQ A;  3C6P B;  4QND A;  4DU3 A;  2JPN A;  2YB5 A;  1FZ2 E;  3J2P A;  4DTP A;  1P22 A;  3HP9 A;  2LF6 A;  3QES A;  4J2E A;  1FZ8 E;  3BVO A;  1FZ1 E;  4DTS A;  4B08 A;  4EP9 A;  4DTM A;  3SQ2 A;  4AKI A;  4AKH A;  3SUQ A;  4X5N A;  5IZ7 A;  2DY4 A;  4AI6 A;  4FVM A;  4FJ7 A;  4KI4 A;  2B7M A;  4M3U A;  4DTU A;  2JHP A;  3C95 A;  4IT5 A;  1MHY G;  2E31 A;  1FZ0 E;  3LD8 A;  3WSO A;  1FS1 A;  2MMB A;  1XVD E;  4ADN A;  4FK2 A;  4M3Z A;  3NGI A;  3UO2 A;  4EPH A;  3QEP A;  4HCC A;  3SQ1 A;  3E4W A;  3L0M A;  2OZM A;  3L1N A;  2OVR B;  3N1B A;  1FPO A;  1XVB E;  4RL5 A;  2DEB A;  3SUN A;  4E4B A;  4KHS A;  2DTU A;  2MW2 A;  1XVC E;  3TJY A;  2OVQ B;  3NHG A;  1FZH E;  3HGL A;  3SQ4 A;  4FJJ A;  1IH7 A;  1LDK E;  1WAF A;  2P1P B;  2B8I A;  3UO3 A;  2JHA A;  4DTR A;  1Q9Y A;  4I6J B;  4J2B A;  4KI6 A;  3C6N B;  4J2A A;  4X5M A;  2B1E A;  3QNO A;  3SQ0 A;  2OZS A;  1FYZ E;  1XU5 E;  5IBK B;  5IRE A;  2PFT A;  2FW3 A;  4RNG A;  2JH9 A;  4ICG C;  2P1N B;  3LZJ A;  4QNC A;  3SNN A;  4AKG A;  2E32 A;  3OGM B;  1FZI E;  2P5O A;  2VJ4 A;  1MMO G;  3RMA A;  1MTY G;  4GAM C;  4DU1 A;  4DTX A;  3J27 A;  3KD1 E;  4FK0 A;  3RMB A;  3KD5 E;  4FJI A;  4FJX A;  3C6O B;  2QXF A;  3QEV A;  2K5S A;  4JS4 A;  3QER A;  4KHU A;  2VJ5 A;  3QNN A;  4M42 A;  3OGK B;  2ATQ A;  3HL8 A;  1JW2 A;  3SCX A;  4EYW A;  1FZ6 E;  3NE6 A;  3QEI A;  3TL8 B;  3SJJ A;  4M41 A;  3V7D B;  3UIQ A;  3NDK A;  1WAJ A;  4JS5 A;  4FJG A;  1N1C A;  3C94 A;  2JHC A;  1XVE E;  1Q9X A;  4I9L A;  4FK4 A;  2LF3 A;  4FJM A;  3HGK E;  1XMH E;  3QET A;  1XU3 E;  4ADO A;  4FJH A;  4KHY A;  3SI6 A;  3CFR A;  4DU4 A;  4DTN A;  4M3W A;  3RMC A;  3NAE A;  4JRP A;  3SVI A;  4E3S A;  4M3T A;  2MZW B;  4M45 A;  3N1E A;  3NCI A;  2P1O B;  1NEX B;  2P5G A;  4KHW A;  4I9Q A;  1XMF E; 
#chains in the Genus database with same CATH homology
 1IG9 A;  4KHN A;  3CFO A;  1XL3 C;  3RWU A;  2H4T A;  3CQ8 A;  1XMG E;  4FJL A;  3E4Y A;  1FXX A;  1CLQ A;  2VIX A;  2P1M B;  1FZ9 E;  2PFV A;  3CFP A;  3SPY A;  4RG8 A;  4J2D A;  4FJN A;  5H37 A;  3MKS B;  3LZI A;  4FJ9 A;  1XVG E;  4JRQ A;  3SUO A;  1FZ4 E;  3TAF A;  4DTJ A;  3L2O B;  1XVF E;  3L8B A;  1MHZ G;  3TAE A;  4M3X A;  3TAG A;  3QEW A;  4FJ5 A;  3LDB A;  4M3Y A;  4HCB A;  3QEX A;  3TAB A;  4M3R A;  1FZ5 E;  3LDS A;  1FZ3 E;  4DTO A;  2JH8 A;  2HD0 A;  2RCU A;  4FJK A;  3OGL B;  4FJ8 A;  3SPZ A;  3SUP A;  4KHQ A;  2P1Q B;  3K2O A;  1FZ7 E;  2FYO A;  2OVP B;  3RMD A;  3S9H A;  2OYQ A;  3C6P B;  4QND A;  4DU3 A;  2JPN A;  2YB5 A;  1FZ2 E;  3J2P A;  4DTP A;  1P22 A;  3HP9 A;  2LF6 A;  3QES A;  4J2E A;  1FZ8 E;  4DTS A;  1FZ1 E;  4DTM A;  4B08 A;  4EP9 A;  4AKI A;  3SQ2 A;  4AKH A;  4AI6 A;  3SUQ A;  4X5N A;  5IZ7 A;  2DY4 A;  4FVM A;  4FJ7 A;  4KI4 A;  2B7M A;  4M3U A;  4DTU A;  2JHP A;  3C95 A;  1MHY G;  2E31 A;  1FZ0 E;  3LD8 A;  3WSO A;  1FS1 A;  2MMB A;  1XVD E;  4ADN A;  4FK2 A;  4M3Z A;  3NGI A;  4EPH A;  3QEP A;  4HCC A;  3SQ1 A;  3E4W A;  3L0M A;  2OZM A;  3L1N A;  2OVR B;  3N1B A;  4KHS A;  1XVB E;  4RL5 A;  2DEB A;  3SUN A;  4E4B A;  2DTU A;  1XVC E;  3TJY A;  2OVQ B;  3NHG A;  1FZH E;  3HGL A;  3SQ4 A;  4FJJ A;  1IH7 A;  1LDK E;  1WAF A;  2P1P B;  2B8I A;  2JHA A;  4DTR A;  1Q9Y A;  4I6J B;  4J2B A;  4KI6 A;  3C6N B;  4J2A A;  4X5M A;  2B1E A;  3QNO A;  3SQ0 A;  2OZS A;  1FYZ E;  1XU5 E;  5IBK B;  5IRE A;  2PFT A;  2FW3 A;  4RNG A;  2JH9 A;  2P1N B;  3LZJ A;  4QNC A;  3SNN A;  4AKG A;  2E32 A;  3OGM B;  1FZI E;  2P5O A;  2VJ4 A;  1MMO G;  3RMA A;  1MTY G;  4GAM C;  4DU1 A;  4DTX A;  3J27 A;  3KD1 E;  4FK0 A;  3RMB A;  3KD5 E;  4FJI A;  4FJX A;  3C6O B;  2QXF A;  3QEV A;  3QER A;  4JS4 A;  4KHU A;  2VJ5 A;  3QNN A;  4M42 A;  3OGK B;  2ATQ A;  3HL8 A;  3SCX A;  4EYW A;  1FZ6 E;  3NE6 A;  3QEI A;  3TL8 B;  3SJJ A;  4M41 A;  3V7D B;  3UIQ A;  3NDK A;  1WAJ A;  4JS5 A;  4FJG A;  3C94 A;  1Q9X A;  2JHC A;  1XVE E;  4I9L A;  4FK4 A;  2LF3 A;  4FJM A;  3HGK E;  1XMH E;  3QET A;  1XU3 E;  4ADO A;  4FJH A;  4KHY A;  3SI6 A;  3CFR A;  4DU4 A;  4DTN A;  4M3W A;  3RMC A;  3NAE A;  4JRP A;  3SVI A;  4E3S A;  4M3T A;  2MZW B;  4M45 A;  3N1E A;  3NCI A;  2P1O B;  1NEX B;  2P5G A;  4KHW A;  4I9Q A;  1XMF E; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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