4UPHA

Crystal structure of phosphonate monoester hydrolase of agrobacterium radiobacter
Total Genus 169
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
169
sequence length
504
structure length
503
Chain Sequence
RPNVLLISADQWRGDCLSAVGHASVKTPNVDALAQDGVLFTRHFAGTAPSPARATLYTGLYQMNHRVCRNGSPLDARFDNLALAARRGGYDPTLFGYTDTAPDPRGMDPNDPHLTTYEGVLPGFSARQLLPEHEKQWLSWLRSRGHPEATSRDIHIPVGATPGEISDVAPAYSKDETQTAFLAGEFIRWLGEQDAPWFAHVSFLRPHPPFSVPEPYNRMFTPSDGPAFARAANREAEQAVHPLLAFALPLIGKDSFIYGGEGSASDWTSEDLSAIRAIYYGMIAEVDTQLGRIWQALKNVGAWDDTLIIFTSDHAEMMGDHWMLGKGGFFDGSYHVPLVIRDPGHPGGAGRQVERFTSAADIFPTLCDRLGLVPDNHLDGGTLVPFLEGGEPEGWRDAAFWEFDFRDIAKGEAERHFGLKSNACNLAVIRDERFKYVHFAGLPPLLYDLAKDPMELTNVAADADYAAVRLGYAEKLLSLRAQHLDQTLAYTELTEKGPVSRRP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords SULFATASE (SULFURIC ESTER HYDROLASE) PROTEIN
publication title Balancing Specificity and Promiscuity in Enzyme Evolution: Multidimensional Activity Transitions in the Alkaline Phosphatase Superfamily.
pubmed doi rcsb
source organism Agrobacterium radiobacter k84
total genus 169
structure length 503
sequence length 504
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00884 Sulfatase Sulfatase
A PF16347 DUF4976 Domain of unknown function (DUF4976)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 4uphA00
4KJDA 4FDJA 4UPIA 1ELYA 1Y7AA 1SHQA 3T02A 3WAYA 3BDGA 1AUKA 2W5WA 1N2KA 5LRMA 1FSUA 3DYCA 1ELXA 1ANIA 3B5QA 2VQRA 3CMRA 3T00A 3A52A 1HDHA 3M8YA 1E33P 4UORA 4LREA 2XRGA 2D1GA 3SZZA 2GA3A 3UNYA 2GSUA 4UPKA 3BDHA 3WAVA 1URAA 4GTWA 5GOVA 3UN5A 1KHNA 3UN3A 4LR7A 3UO0A 3MK0A 4LR2A 3Q3QA 4MY4A 4CYSA 2W5SA 5IJSA 1AJCA 2QZUA 4GTYA 2X98A 1KHKA 1EQJA 1ZEBA 1ZEFA 3LXQA 1ALHA 3TWZA 3M7VA 3NKRA 4MIVA 4LRBA 1KH9A 5HRTA 4LRFA 1ALJA 2W5TA 1ALIA 5GRRA 5L0KA 3NVLA 1KHJA 3DPCA 4LRDA 3WBHA 1HJKA 1Y6VA 4UOPA 4KAYA 5IJQA 3IGYB 5L0BA 1E1ZP 4LR8A 1O98A 1AJAA 5LRNA 1EW9A 3MK1A 4MHXA 4GTXA 2IFYA 1E2SP 4LRCA 5EGEA 5K4PA 4ZG9A 2W8SA 1ED8A 4LRAA 4QAXA 5LQQA 4ZG7A 1ANJA 4LQYA 3WAXA 2ANHA 1ZEDA 3NKMA 4UPHA 2GSOA 1URBA 1KH7A 3SZYA 3M8WA 3T01A 1KH5A 1KHLA 2RH6A 1ED9A 5LIAA 4ZG6A 4NWJA 3BDGB 3E2DA 3KD8A 3NKQA 3NKNA 1K7HA 5C66A 3IDDA 2W8DA 3TG0A 1EJJA 3NKOA 1EI6A 1P49A 2IUCB 4B56A 1ALKA 3TX0A 4GTZA 3ED4A 5AJ9A 5TJ3A 1N2LA 1AJDA 3NKPA 4N7TA 4CXUA 4UOOA 5KXAA 1EW8A 1O99A 2IUCA 2W5RA 4NWXA 5EGHA 5INHA 4UPLA 3WAWA 4YR1A 5DLVA 2GLQA 5DLTA 1ELZA 4CYRA 3M8ZA 2XR9A 4TN0A 1B8JA 1SHNA 5DLWA 2W5QA 1HQAA 1EW2A 5L0EA 2G9YA 2W5VA 2ZKTA 3IGZB 3MK2A 3OT9A 2W5XA 4LR9A 4KJGA 1AJBA 1KH4A 4FDIA 4CXKA 3UN2A 1E3CP 4CXSA 2GSNA 3BDFA 4KM4A 4ZGAA 4KAVA
chains in the Genus database with same CATH superfamily
4KJDA 4FDJA 4UPIA 1ELYA 1Y7AA 1SHQA 3T02A 3WAYA 3BDGA 1AUKA 2W5WA 1N2KA 5LRMA 1FSUA 3DYCA 1ELXA 1ANIA 3B5QA 2VQRA 3CMRA 3T00A 3A52A 1HDHA 3M8YA 1E33P 4UORA 4LREA 2XRGA 2D1GA 3SZZA 2GA3A 3UNYA 2GSUA 4UPKA 3BDHA 3WAVA 1URAA 4GTWA 5GOVA 3UN5A 1KHNA 3UN3A 4LR7A 3UO0A 3MK0A 4LR2A 3Q3QA 4MY4A 4CYSA 2W5SA 5IJSA 1AJCA 2QZUA 4GTYA 2X98A 1KHKA 1EQJA 1ZEBA 1ZEFA 3LXQA 1ALHA 3TWZA 3M7VA 3NKRA 4MIVA 4LRBA 1KH9A 5HRTA 4LRFA 1ALJA 2W5TA 1ALIA 5GRRA 5L0KA 3NVLA 1KHJA 3DPCA 4LRDA 3WBHA 1HJKA 1Y6VA 4UOPA 4KAYA 5IJQA 3IGYB 5L0BA 1E1ZP 4LR8A 1O98A 1AJAA 5LRNA 1EW9A 3MK1A 4MHXA 4GTXA 2IFYA 1E2SP 4LRCA 5EGEA 5K4PA 4ZG9A 2W8SA 1ED8A 4LRAA 4QAXA 5LQQA 4ZG7A 1ANJA 4LQYA 3WAXA 2ANHA 1ZEDA 3NKMA 4UPHA 2GSOA 1URBA 1KH7A 3SZYA 3M8WA 3T01A 1KH5A 1KHLA 2RH6A 1ED9A 5LIAA 4ZG6A 4NWJA 3BDGB 3E2DA 3KD8A 3NKQA 3NKNA 1K7HA 5C66A 3IDDA 2W8DA 3TG0A 1EJJA 3NKOA 1EI6A 1P49A 2IUCB 4B56A 1ALKA 3TX0A 4GTZA 3ED4A 5AJ9A 5TJ3A 1N2LA 1AJDA 3NKPA 4N7TA 4CXUA 4UOOA 5KXAA 1EW8A 1O99A 2IUCA 2W5RA 4NWXA 5EGHA 5INHA 4UPLA 3WAWA 4YR1A 5DLVA 2GLQA 5DLTA 1ELZA 4CYRA 3M8ZA 2XR9A 4TN0A 1B8JA 1SHNA 5DLWA 2W5QA 1HQAA 1EW2A 5L0EA 2G9YA 2W5VA 2ZKTA 3IGZB 3MK2A 3OT9A 2W5XA 4LR9A 4KJGA 1AJBA 1KH4A 4FDIA 4CXKA 3UN2A 1E3CP 4CXSA 2GSNA 3BDFA 4KM4A 4ZGAA 4KAVA
chains in the Genus database with same CATH topology
4KJDA 4FDJA 4UPIA 1ELYA 1Y7AA 1SHQA 3T02A 3WAYA 3BDGA 1AUKA 2W5WA 1N2KA 5LRMA 1FSUA 3DYCA 1ELXA 1ANIA 3B5QA 2VQRA 3CMRA 3T00A 3A52A 1HDHA 3M8YA 1E33P 4UORA 4LREA 2XRGA 2D1GA 3SZZA 2GA3A 3UNYA 2GSUA 4UPKA 3BDHA 3WAVA 1URAA 4GTWA 5GOVA 3UN5A 1KHNA 3UN3A 4LR7A 3UO0A 3MK0A 4LR2A 3Q3QA 4MY4A 4CYSA 2W5SA 5IJSA 1AJCA 2QZUA 4GTYA 2X98A 1KHKA 1EQJA 1ZEBA 1ZEFA 3LXQA 1ALHA 3TWZA 3M7VA 3NKRA 4MIVA 4LRBA 1KH9A 5HRTA 4LRFA 1ALJA 2W5TA 1ALIA 5GRRA 5L0KA 3NVLA 1KHJA 3DPCA 4LRDA 3WBHA 1HJKA 1Y6VA 4UOPA 4KAYA 5IJQA 3IGYB 5L0BA 1E1ZP 4LR8A 1O98A 1AJAA 5LRNA 1EW9A 3MK1A 4MHXA 4GTXA 2IFYA 1E2SP 4LRCA 5EGEA 5K4PA 4ZG9A 2W8SA 1ED8A 4LRAA 4QAXA 5LQQA 4ZG7A 1ANJA 4LQYA 3WAXA 2ANHA 1ZEDA 3NKMA 4UPHA 2GSOA 1URBA 1KH7A 3SZYA 3M8WA 3T01A 1KH5A 1KHLA 2RH6A 1ED9A 5LIAA 4ZG6A 4NWJA 3BDGB 3E2DA 3KD8A 3NKQA 3NKNA 1K7HA 5C66A 3IDDA 2W8DA 3TG0A 1EJJA 3NKOA 1EI6A 1P49A 2IUCB 4B56A 1ALKA 3TX0A 4GTZA 3ED4A 5AJ9A 5TJ3A 1N2LA 1AJDA 3NKPA 4N7TA 4CXUA 4UOOA 5KXAA 1EW8A 1O99A 2IUCA 2W5RA 4NWXA 5EGHA 5INHA 4UPLA 3WAWA 4YR1A 5DLVA 2GLQA 5DLTA 1ELZA 4CYRA 3M8ZA 2XR9A 4TN0A 1B8JA 1SHNA 5DLWA 2W5QA 1HQAA 1EW2A 5L0EA 2G9YA 2W5VA 2ZKTA 3IGZB 3MK2A 3OT9A 2W5XA 4LR9A 4KJGA 1AJBA 1KH4A 4FDIA 4CXKA 3UN2A 1E3CP 4CXSA 2GSNA 3BDFA 4KM4A 4ZGAA 4KAVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KJD A;  4FDJ A;  4UPI A;  1ELY A;  1Y7A A;  1SHQ A;  3T02 A;  3WAY A;  3BDG A;  1AUK A;  2W5W A;  1N2K A;  5LRM A;  1FSU A;  3DYC A;  1ELX A;  1ANI A;  3B5Q A;  2VQR A;  3CMR A;  3T00 A;  3A52 A;  1HDH A;  3M8Y A;  1E33 P;  4UOR A;  4LRE A;  2XRG A;  2D1G A;  3SZZ A;  2GA3 A;  3UNY A;  2GSU A;  4UPK A;  3BDH A;  3WAV A;  1URA A;  4GTW A;  5GOV A;  3UN5 A;  1KHN A;  3UN3 A;  4LR7 A;  3UO0 A;  3MK0 A;  4LR2 A;  3Q3Q A;  4MY4 A;  4CYS A;  2W5S A;  5IJS A;  1AJC A;  2QZU A;  4GTY A;  2X98 A;  1KHK A;  1EQJ A;  1ZEB A;  1ZEF A;  3LXQ A;  1ALH A;  3TWZ A;  3M7V A;  3NKR A;  4MIV A;  4LRB A;  1KH9 A;  5HRT A;  4LRF A;  1ALJ A;  2W5T A;  1ALI A;  5GRR A;  5L0K A;  3NVL A;  1KHJ A;  3DPC A;  4LRD A;  3WBH A;  1HJK A;  1Y6V A;  4UOP A;  4KAY A;  5IJQ A;  3IGY B;  5L0B A;  1E1Z P;  4LR8 A;  1O98 A;  1AJA A;  5LRN A;  1EW9 A;  3MK1 A;  4MHX A;  4GTX A;  2IFY A;  1E2S P;  4LRC A;  5EGE A;  5K4P A;  4ZG9 A;  2W8S A;  1ED8 A;  4LRA A;  4QAX A;  5LQQ A;  4ZG7 A;  1ANJ A;  4LQY A;  3WAX A;  2ANH A;  1ZED A;  3NKM A;  4UPH A;  2GSO A;  1URB A;  1KH7 A;  3SZY A;  3M8W A;  3T01 A;  1KH5 A;  1KHL A;  2RH6 A;  1ED9 A;  5LIA A;  4ZG6 A;  4NWJ A;  3BDG B;  3E2D A;  3KD8 A;  3NKQ A;  3NKN A;  1K7H A;  5C66 A;  3IDD A;  2W8D A;  3TG0 A;  1EJJ A;  3NKO A;  1EI6 A;  1P49 A;  2IUC B;  4B56 A;  1ALK A;  3TX0 A;  4GTZ A;  3ED4 A;  5AJ9 A;  5TJ3 A;  1N2L A;  1AJD A;  3NKP A;  4N7T A;  4CXU A;  4UOO A;  5KXA A;  1EW8 A;  1O99 A;  2IUC A;  2W5R A;  4NWX A;  5EGH A;  5INH A;  4UPL A;  3WAW A;  4YR1 A;  5DLV A;  2GLQ A;  5DLT A;  1ELZ A;  4CYR A;  3M8Z A;  2XR9 A;  4TN0 A;  1B8J A;  1SHN A;  5DLW A;  2W5Q A;  1HQA A;  1EW2 A;  5L0E A;  2G9Y A;  2W5V A;  2ZKT A;  3IGZ B;  3MK2 A;  3OT9 A;  2W5X A;  4LR9 A;  4KJG A;  1AJB A;  1KH4 A;  4FDI A;  4CXK A;  3UN2 A;  1E3C P;  4CXS A;  2GSN A;  3BDF A;  4KM4 A;  4ZGA A;  4KAV A; 
#chains in the Genus database with same CATH topology
 4KJD A;  4FDJ A;  4UPI A;  1ELY A;  1Y7A A;  1SHQ A;  3T02 A;  3WAY A;  3BDG A;  1AUK A;  2W5W A;  1N2K A;  5LRM A;  1FSU A;  3DYC A;  1ELX A;  1ANI A;  3B5Q A;  2VQR A;  3CMR A;  3T00 A;  3A52 A;  1HDH A;  3M8Y A;  1E33 P;  4UOR A;  4LRE A;  2XRG A;  2D1G A;  3SZZ A;  2GA3 A;  3UNY A;  2GSU A;  4UPK A;  3BDH A;  3WAV A;  1URA A;  4GTW A;  5GOV A;  3UN5 A;  1KHN A;  3UN3 A;  4LR7 A;  3UO0 A;  3MK0 A;  4LR2 A;  3Q3Q A;  4MY4 A;  4CYS A;  2W5S A;  5IJS A;  1AJC A;  2QZU A;  4GTY A;  2X98 A;  1KHK A;  1EQJ A;  1ZEB A;  1ZEF A;  3LXQ A;  1ALH A;  3TWZ A;  3M7V A;  3NKR A;  4MIV A;  4LRB A;  1KH9 A;  5HRT A;  4LRF A;  1ALJ A;  2W5T A;  1ALI A;  5GRR A;  5L0K A;  3NVL A;  1KHJ A;  3DPC A;  4LRD A;  3WBH A;  1HJK A;  1Y6V A;  4UOP A;  4KAY A;  5IJQ A;  3IGY B;  5L0B A;  1E1Z P;  4LR8 A;  1O98 A;  1AJA A;  5LRN A;  1EW9 A;  3MK1 A;  4MHX A;  4GTX A;  2IFY A;  1E2S P;  4LRC A;  5EGE A;  5K4P A;  4ZG9 A;  2W8S A;  1ED8 A;  4LRA A;  4QAX A;  5LQQ A;  4ZG7 A;  1ANJ A;  4LQY A;  3WAX A;  2ANH A;  1ZED A;  3NKM A;  4UPH A;  2GSO A;  1URB A;  1KH7 A;  3SZY A;  3M8W A;  3T01 A;  1KH5 A;  1KHL A;  2RH6 A;  1ED9 A;  5LIA A;  4ZG6 A;  4NWJ A;  3BDG B;  3E2D A;  3KD8 A;  3NKQ A;  3NKN A;  1K7H A;  5C66 A;  3IDD A;  2W8D A;  3TG0 A;  1EJJ A;  3NKO A;  1EI6 A;  1P49 A;  2IUC B;  4B56 A;  1ALK A;  3TX0 A;  4GTZ A;  3ED4 A;  5AJ9 A;  5TJ3 A;  1N2L A;  1AJD A;  3NKP A;  4N7T A;  4CXU A;  4UOO A;  5KXA A;  1EW8 A;  1O99 A;  2IUC A;  2W5R A;  4NWX A;  5EGH A;  5INH A;  4UPL A;  3WAW A;  4YR1 A;  5DLV A;  2GLQ A;  5DLT A;  1ELZ A;  4CYR A;  3M8Z A;  2XR9 A;  4TN0 A;  1B8J A;  1SHN A;  5DLW A;  2W5Q A;  1HQA A;  1EW2 A;  5L0E A;  2G9Y A;  2W5V A;  2ZKT A;  3IGZ B;  3MK2 A;  3OT9 A;  2W5X A;  4LR9 A;  4KJG A;  1AJB A;  1KH4 A;  4FDI A;  4CXK A;  3UN2 A;  1E3C P;  4CXS A;  2GSN A;  3BDF A;  4KM4 A;  4ZGA A;  4KAV A; 
#chains in the Genus database with same CATH homology
 4KJD A;  4FDJ A;  4UPI A;  1ELY A;  1Y7A A;  1SHQ A;  3T02 A;  3WAY A;  3BDG A;  1AUK A;  2W5W A;  1N2K A;  5LRM A;  1FSU A;  3DYC A;  1ELX A;  1ANI A;  3B5Q A;  2VQR A;  3CMR A;  3T00 A;  3A52 A;  1HDH A;  3M8Y A;  1E33 P;  4UOR A;  4LRE A;  2XRG A;  2D1G A;  3SZZ A;  2GA3 A;  3UNY A;  2GSU A;  4UPK A;  3BDH A;  3WAV A;  1URA A;  4GTW A;  5GOV A;  3UN5 A;  1KHN A;  3UN3 A;  4LR7 A;  3UO0 A;  3MK0 A;  4LR2 A;  3Q3Q A;  4MY4 A;  4CYS A;  2W5S A;  5IJS A;  1AJC A;  2QZU A;  4GTY A;  2X98 A;  1KHK A;  1EQJ A;  1ZEB A;  1ZEF A;  3LXQ A;  1ALH A;  3TWZ A;  3M7V A;  3NKR A;  4MIV A;  4LRB A;  1KH9 A;  5HRT A;  4LRF A;  1ALJ A;  2W5T A;  1ALI A;  5GRR A;  5L0K A;  3NVL A;  1KHJ A;  3DPC A;  4LRD A;  3WBH A;  1HJK A;  1Y6V A;  4UOP A;  4KAY A;  5IJQ A;  3IGY B;  5L0B A;  1E1Z P;  4LR8 A;  1O98 A;  1AJA A;  5LRN A;  1EW9 A;  3MK1 A;  4MHX A;  4GTX A;  2IFY A;  1E2S P;  4LRC A;  5EGE A;  5K4P A;  4ZG9 A;  2W8S A;  1ED8 A;  4LRA A;  4QAX A;  5LQQ A;  4ZG7 A;  1ANJ A;  4LQY A;  3WAX A;  2ANH A;  1ZED A;  3NKM A;  4UPH A;  2GSO A;  1URB A;  1KH7 A;  3SZY A;  3M8W A;  3T01 A;  1KH5 A;  1KHL A;  2RH6 A;  1ED9 A;  5LIA A;  4ZG6 A;  4NWJ A;  3BDG B;  3E2D A;  3KD8 A;  3NKQ A;  3NKN A;  1K7H A;  5C66 A;  3IDD A;  2W8D A;  3TG0 A;  1EJJ A;  3NKO A;  1EI6 A;  1P49 A;  2IUC B;  4B56 A;  1ALK A;  3TX0 A;  4GTZ A;  3ED4 A;  5AJ9 A;  5TJ3 A;  1N2L A;  1AJD A;  3NKP A;  4N7T A;  4CXU A;  4UOO A;  5KXA A;  1EW8 A;  1O99 A;  2IUC A;  2W5R A;  4NWX A;  5EGH A;  5INH A;  4UPL A;  3WAW A;  4YR1 A;  5DLV A;  2GLQ A;  5DLT A;  1ELZ A;  4CYR A;  3M8Z A;  2XR9 A;  4TN0 A;  1B8J A;  1SHN A;  5DLW A;  2W5Q A;  1HQA A;  1EW2 A;  5L0E A;  2G9Y A;  2W5V A;  2ZKT A;  3IGZ B;  3MK2 A;  3OT9 A;  2W5X A;  4LR9 A;  4KJG A;  1AJB A;  1KH4 A;  4FDI A;  4CXK A;  3UN2 A;  1E3C P;  4CXS A;  2GSN A;  3BDF A;  4KM4 A;  4ZGA A;  4KAV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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