4XLNA

Crystal structure of t. aquaticus transcription initiation complex containing bubble promoter and rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
227
structure length
227
Chain Sequence
KAPVFTATTQGDHYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLDPKMASTTLILRAEGPKEVRAGDFTPSADVEIMNPDLHIATLEEGGKLYMEVRVDRGVGYVPAERHGIKDRINAIPVDAIFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHLNYFANPEASLL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/dna/rna
molecule keywords DNA-directed RNA polymerase subunit alpha
publication title Structure of a bacterial RNA polymerase holoenzyme open promoter complex.
pubmed doi rcsb
source organism Thermus aquaticus
total genus 41
structure length 227
sequence length 227
chains with identical sequence B, G, H
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2015-01-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4xlnA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4xlnA01
3CQZK 2E2IK 3GTMC 4A3JC 4YFKA 4A3EC 4A3BC 2NVQK 3PO3C 2R7ZC 3S2HK 1ZYRA 4BY7C 1R9TC 4A3CK 4A3DC 1I6HK 2E2JK 4Q5SA 4QJVA 2PA8D 3GTGK 3S1NK 5IYBC 5IYCC 2R92K 3HOVC 4A3BK 3PO3K 2R7ZK 4A3FC 4BY7K 4KN7A 2E2HC 3HOUC 4QIWD 3H3VL 4NOIA 3K7AC 1TWFC 3H0GC 2NVTC 3PO2C 3I4NC 1I3QC 4Y7NC 3S1MK 1WCMK 2VUMC 4A3MK 5M3MK 4MEXA 4C2MC 2O5JA 3GTKK 1TWAC 2YU9C 3GTOC 5C4JK 3EQLA 4XLNA 3K7AK 5FLMC 3H0GK 1SMYA 2JA7K 4G7ZA 4BXXC 1TWHK 1BDFA 3S17C 1SFOC 3S15C 3RZDC 4GZYA 3WODA 3GTLK 4BBSK 3GTQC 1Y1WK 3HOYK 5M5WK 2JA5C 3S14K 5C4XC 4C3JK 2JA6K 4A3GC 2BE5A 4YFXA 4Y52C 4BY1K 4G7OA 3S2DK 1TWCC 1YNNA 2WAQD 4OINA 3S1QC 4A3JK 4AYBL 3RZDK 3GTMK 2PA8L 4A3EK 1XPPA 4C3HC 5C4XK 3FKIC 2Y0SD 4X6AC 2PPBA 4LK1A 4A3KC 1R9TK 4LLGA 4A3DK 1I50C 1TWCK 2PMZD 3HKZD 5IYDC 5IYBK 4A93C 5IYCK 1K83C 3HOVK 2B63C 4A3FK 5TMFA 4A3LC 2E2HK 3HOUK 4YFNA 3DXJA 1Y1VC 1TWFK 2NVTK 3PO2K 2A6HA 3I4NK 1I3QK 4Y7NK 5IP9C 5IYDK 2VUMK 2NVYC 3I4MC 2A68A 4OIOA 3RZOC 4C2MK 3GTPC 1TWAK 5M5XK 2YU9K 1TWGC 4YG2A 3GTOK 4A3LK 4MEYA 5C3EC 3S16C 3S1MC 4A3IC 3S2DC 4BBRC 5FLMK 4OIRA 3GTJC 3HOXC 5IP9K 4BXXK 1SFOK 3S15K 4OIQA 2NVYK 2WAQL 2R93C 2JA8C 3GTQK 2NVXC 3GTPK 3M3YC 2JA5K 2WB1D 2A6EA 3S1RC 3S17K 4A3GK 4Y52K 4LK0A 3HOWC 3GTJK 3HOXK 4QIWL 3S1QK 5TMCA 1IW7A 4A3CC 4OIPA 1I6HC 4C3HK 2E2JC 3FKIK 4X6AK 2O5IA 3GTGC 3S1NC 4A3KK 1HQMA 5IP7C 3HOZC 3HOWK 2R92C 1I50K 4Q4ZA 4KMUA 4MQ9A 2A69A 4A93K 4KN4A 5D4DA 3M4OC 1K83K 4XSXA 5C44C 2B63K 4AYBD 2CW0A 3HOZK 5IP7K 4XLPA 1WCMC 4JK1A 4XSZA 4A3MC 1Y1VK 4LJZA 1I6VA 3GTKC 5C4JC 3M4OK 3H3VD 3I4MK 5C44K 3RZOK 4C3IC 4G7HA 2JA7C 1TWGK 1TWHC 3CQZC 2E2IC 2WB1L 5C3EK 4BBSC 3GTLC 4A3IK 2Y0SL 4BBRK 3S16K 4QJVB 3HOYC 1Y1WC 2NVQC 3S14C 5M3FK 1YNJA 4C3JC 2JA6C 3S2HC 2PMZL 3HKZL 4C3IK 5FJ8K 2NVXK 2JA8K 3M3YK 2R93K 3S1RK 4BY1C 5M5YK 4ZH4A
chains in the Genus database with same CATH superfamily
4GTCA 4A3BC 2NVQK 4A3DC 2E2JK 3S1NK 1PJ6A 2RGRA 5IYCC 2R93A 3HOVC 2NVXA 1VGXA 1O25A 2GAHC 4KN7A 3HOUC 3K7AC 3H0GC 4J3NA 1WCMK 1GE9A 2VUMC 1TWAC 2GAGC 5HL8A 4IOAS 1X31C 4BXXC 4WF9S 4AH6A 5JVOA 3GTQC 3GSIA 1Y1WK 5M5WK 2JA5C 2JA6K 3OPFA 4G7OA 2WAQD 3S1QC 3GTMK 1O29A 1WOPA 5IORA 2Y0SD 3CQZA 2PPBA 4A3KC 3LAJA 4KMAA 1I50C 1Y1WA 2PMZD 2JA6A 3LPXA 4A3FK 5TMFA 3GTMA 4WJ3M 3A8JA 3JSTA 4YFNA 1EQRA 5JFEA 1HI9A 3PO2K 4XCHA 5EGEA 2EBBA 1F7UA 4WCES 2JH3A 4YG2A 2L3UA 4KM8A 5C3EC 5FLMK 4FZBA 4OIRA 1WSVA 4LQYA 1INNA 3HOXC 1IS1A 3GIRA 4OIQA 3TFJA 2R93C 2NVXC 2KXYA 1BJTA 1EI6A 3HOWC 3GEHA 5CHPA 4O2DA 1WSRA 4C3HK 1WQGA 2E2JC 3FKIK 3S1NC 2P5MA 4P5AA 3GDZA 2Y3PA 4MQ9A 4A93K 1K83K 4C45A 3AD7C 2B63K 4AYBD 1TWCA 1WCMC 2CFAB 3GEEA 1Y1VK 3HXAA 1DCHA 1F93A 1F9NA 4M1XA 4WJ4A 3RZOK 3CQZC 3S16K 4A3IK 2VUMA 1K83A 1Y1WC 4GTDA 2B63A 1EFWA 1YNJA 2JA6C 3S2HC 2GSNA 3HKZL 4C3IK 2CFAA 2XCRB 3N0CA 4G0VA 3L4KA 3GTMC 1C0AA 3GTPA 3PO3C 4BY7C 4A3CK 1I6HK 4Q5SA 4KAWX 1XXCA 3LYWA 2R7ZK 4A3FC 4P5BA 1USMA 3TFHA 4QIWD 3H3VL 4NOIA 1F7VA 3PO2C 4GFQA 1I50A 4A3MK 5M3MK 3AQPA 3T02A 1WQFA 5IOSA 4XLNA 5FLMC 4KB4A 1TWHK 1WIHA 3RZDC 2FQOA 3WODA 3Q3QA 3GTLK 3HOYK 4KMHA 3AQOA 5IOQA 5JVGS 2BE5A 1TWCC 3S17K 2XCQA 4A3JK 4A3EK 1XPPA 4C3HC 1J6WA 5C4XK 3FKIC 1TWHA 5IYDC 1WQHA 4GTLA 4A93C 5IYBK 1K83C 3V4GA 2B63C 1Y1VC 1TWFK 4RMFA 2A6HA 4LR2A 1I3QK 5IP9C 1VJEA 4C2MK 4LOWA 3RZOC 3GTPC 2YU9K 3GTOK 4A3LK 3TFIA 3S16C 1WCMA 3OREA 4A3IC 4KASA 3OEPA 4DDQA 3S15K 2P8TA 2NVYK 2WAQL 1TWFA 2WB1D 4GTBA 1ZQ1C 1I3QA 4A3GK 4Y52K 3GTJK 3CF5S 2YU9A 3GTOA 1IW7A 2ZJQS 4WILA 4A3CC 1VLOA 3S0XA 1I6HC 1USOA 4X6AK 2O5IA 5IP7C 3AD8C 2ZJPS 2L5NA 4KMUA 2RH6A 1IQ0A 2ZUFA 3M4OC 2XCOA 4WFAS 5JVHS 3HOZK 4XLPA 4KM9A 4JK1A 2ZJRS 4A3MC 4ILDA 3I4MK 5C44K 2W7VA 4G7HA 1TWHC 3S1MK 2ZUEA 3GTLC 3HOYC 2NVQC 3AH5A 4PAAA 5M3FK 1XXAA 1G51A 1V5VA 2JA8K 1BGWA 1FEUA 2GSOA 2E2IK 3N0BA 4A3JC 4A3EC 1O28A 3N3YA 1ZYRA 2KPUA 4BKWA 2PA8D 3NUHA 1IE0A 5IYBC 1DCPA 2R92K 4A3BK 4GT9A 3FKIA 5DM7S 3QX3A 1TWFC 1I3QC 3L4JA 1O2BA 4C2MC 1J98A 2YU9C 4P9SA 3GTOC 5C4JK 4IO9S 5CJ9A 3K7AK 1Y1VA 3H0GK 2JA7K 4G7ZA 1BDFA 3S15C 4A3GC 5E68A 4YFXA 4Y52C 4IOCS 3S2DK 3T00A 1YNNA 4OINA 1J6XA 3ERED 2JA7A 4X6AC 1KQ4A 1R9TK 1XZQA 1B4BA 3HKZD 1DCOA 3IPJA 2E2HK 3DXJA 1ZXOA 2V6TA 1BS2A 2NVTK 1RU0A 3I4NK 4BLBA 4Y7NK 2R7ZA 1R9TA 1VRQC 3I4MC 3SZYA 5HQHA 5M5XK 1O27A 3S1MC 5L46A 1O2FB 4PABA 1IBAA 3G4CA 3FOFA 1SFOK 3A8KA 2E2HA 2JA8C 4U67S 1UV7A 1VH2A 2A6EA 1JOEA 2KWAA 3GTLA 4LK0A 3HOXK 5TMCA 1YCLA 1JQWA 4OIPA 1SFOA 1O2AA 3HOWK 2R92C 3G4AA 4Q4ZA 1XZPB 2CW0A 3LAPA 4XSZA 4LJZA 1I6VA 4BLAA 5C4JC 3PIOS 4C3IC 2FQTA 1B4AA 2JA7C 1TWGK 3VA7A 2WB1L 1XZPA 2Y0SL 4BBRK 4QJVB 2D6FC 1JVIA 1IL2A 2PMZL 3M3YK 1XXBA 3S1RK 3GEIA 5M5YK 3S2DC 4ZH4A 3CQZK 1WOSA 2ZFZA 4YFKA 2NVYA 1PJ5A 5HL7S 1TWGA 2R7ZC 3S2HK 1R9TC 1O26A 1WORA 4KATA 3GTJA 4QJVA 3GTGK 3PO3K 3FOEA 4KMDA 4BY7K 2E2HC 4WFNS 4GTFA 2NVTC 3I4NC 2V6UA 5EGHA 4Y7NC 4MEXA 2O5JA 3SZZA 3GTKK 4KARA 3DLLS 3GTGA 3EQLA 4WFBS 2V6SA 1SMYA 3ADAC 3S17C 1SFOC 4GZYA 3BUEA 4BBSK 3PIPS 3S14K 5C4XC 4C3JK 4BY1K 3GTKA 4GTAA 3RZDK 5DM6S 4AYBL 2PA8L 4LK1A 1YX2A 5IOTA 4LLGA 2E2IA 4A3DK 1TWCK 5IYCK 3HOVK 4KB2A 4A3LC 3HOUK 2R92A 5IYDK 4FM9A 1XZQB 2VUMK 2PHCB 2NVYC 3AD9C 2A68A 4OIOA 1TWAK 1TWGC 4MEYA 4BBRC 3FHZA 3GTJC 5IP9K 4BXXK 1ZBSA 3GTQK 3GTPK 3M3YC 2JA5K 3S1RC 3H0GA 4KC6A 1ISEA 4QIWL 1TWAA 3MMLB 3S1QK 4G0WA 3GTGC 4A3KK 1HQMA 3HOZC 1PJ7A 4GTEA 3GTQA 1I50K 2JA5A 3A8IA 2A69A 1EK8A 4KN4A 5D4DA 4XSXA 5TJ3A 5C44C 1WOOA 2GSUA 1EH1A 5IP7K 1O24A 2KQ1A 3GTKC 1ZVUA 1L0WA 3M4OK 3H3VD 3TTGA 3T01A 3BP8C 4KDDA 5C3EK 2E2IC 4BBSC 3CAGA 4G0UA 1J6VA 3S14C 1AB4A 4C3JC 1DD5A 3BP3A 2R93K 5FJ8K 2NVXK 4BY1C
chains in the Genus database with same CATH topology
3CQZK 2E2IK 3GTMC 4A3JC 4YFKA 4A3EC 4A3BC 2NVQK 3PO3C 2R7ZC 3S2HK 1ZYRA 4BY7C 1R9TC 4A3CK 4A3DC 1I6HK 2E2JK 4Q5SA 4QJVA 2PA8D 3GTGK 3S1NK 5IYBC 5IYCC 2R92K 3HOVC 4A3BK 3PO3K 2R7ZK 4A3FC 4BY7K 4KN7A 2E2HC 3HOUC 4QIWD 3H3VL 4NOIA 3K7AC 1TWFC 3H0GC 2NVTC 3PO2C 3I4NC 1I3QC 4Y7NC 3S1MK 1WCMK 2VUMC 4A3MK 5M3MK 4MEXA 4C2MC 2O5JA 3GTKK 1TWAC 2YU9C 3GTOC 5C4JK 3EQLA 4XLNA 3K7AK 5FLMC 3H0GK 1SMYA 2JA7K 4G7ZA 4BXXC 1TWHK 1BDFA 3S17C 1SFOC 3S15C 3RZDC 4GZYA 3WODA 3GTLK 4BBSK 3GTQC 1Y1WK 3HOYK 5M5WK 2JA5C 3S14K 5C4XC 4C3JK 2JA6K 4A3GC 2BE5A 4YFXA 4Y52C 4BY1K 4G7OA 3S2DK 1TWCC 1YNNA 2WAQD 4OINA 3S1QC 4A3JK 4AYBL 3RZDK 3GTMK 2PA8L 4A3EK 1XPPA 4C3HC 5C4XK 3FKIC 2Y0SD 4X6AC 2PPBA 4LK1A 4A3KC 1R9TK 4LLGA 4A3DK 1I50C 1TWCK 2PMZD 3HKZD 5IYDC 5IYBK 4A93C 5IYCK 1K83C 3HOVK 2B63C 4A3FK 5TMFA 4A3LC 2E2HK 3HOUK 4YFNA 3DXJA 1Y1VC 1TWFK 2NVTK 3PO2K 2A6HA 3I4NK 1I3QK 4Y7NK 5IP9C 5IYDK 2VUMK 2NVYC 3I4MC 2A68A 4OIOA 3RZOC 4C2MK 3GTPC 1TWAK 5M5XK 2YU9K 1TWGC 4YG2A 3GTOK 4A3LK 4MEYA 5C3EC 3S16C 3S1MC 4A3IC 3S2DC 4BBRC 5FLMK 4OIRA 3GTJC 3HOXC 5IP9K 4BXXK 1SFOK 3S15K 4OIQA 2NVYK 2WAQL 2R93C 2JA8C 3GTQK 2NVXC 3GTPK 3M3YC 2JA5K 2WB1D 2A6EA 3S1RC 3S17K 4A3GK 4Y52K 4LK0A 3HOWC 3GTJK 3HOXK 4QIWL 3S1QK 5TMCA 1IW7A 4A3CC 4OIPA 1I6HC 4C3HK 2E2JC 3FKIK 4X6AK 2O5IA 3GTGC 3S1NC 4A3KK 1HQMA 5IP7C 3HOZC 3HOWK 2R92C 1I50K 4Q4ZA 4KMUA 4MQ9A 2A69A 4A93K 4KN4A 5D4DA 3M4OC 1K83K 4XSXA 5C44C 2B63K 4AYBD 2CW0A 3HOZK 5IP7K 4XLPA 1WCMC 4JK1A 4XSZA 4A3MC 1Y1VK 4LJZA 1I6VA 3GTKC 5C4JC 3M4OK 3H3VD 3I4MK 5C44K 3RZOK 4C3IC 4G7HA 2JA7C 1TWGK 1TWHC 3CQZC 2E2IC 2WB1L 5C3EK 4BBSC 3GTLC 4A3IK 2Y0SL 4BBRK 3S16K 4QJVB 3HOYC 1Y1WC 2NVQC 3S14C 5M3FK 1YNJA 4C3JC 2JA6C 3S2HC 2PMZL 3HKZL 4C3IK 5FJ8K 2NVXK 2JA8K 3M3YK 2R93K 3S1RK 4BY1C 5M5YK 4ZH4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CQZ K;  2E2I K;  3GTM C;  4A3J C;  4YFK A;  4A3E C;  4A3B C;  2NVQ K;  3PO3 C;  2R7Z C;  3S2H K;  1ZYR A;  4BY7 C;  1R9T C;  4A3C K;  4A3D C;  1I6H K;  2E2J K;  4Q5S A;  4QJV A;  2PA8 D;  3GTG K;  3S1N K;  5IYB C;  5IYC C;  2R92 K;  3HOV C;  4A3B K;  3PO3 K;  2R7Z K;  4A3F C;  4BY7 K;  4KN7 A;  2E2H C;  3HOU C;  4QIW D;  3H3V L;  4NOI A;  3K7A C;  1TWF C;  3H0G C;  2NVT C;  3PO2 C;  3I4N C;  1I3Q C;  4Y7N C;  3S1M K;  1WCM K;  2VUM C;  4A3M K;  5M3M K;  4MEX A;  4C2M C;  2O5J A;  3GTK K;  1TWA C;  2YU9 C;  3GTO C;  5C4J K;  3EQL A;  4XLN A;  3K7A K;  5FLM C;  3H0G K;  1SMY A;  2JA7 K;  4G7Z A;  4BXX C;  1TWH K;  1BDF A;  3S17 C;  1SFO C;  3S15 C;  3RZD C;  4GZY A;  3WOD A;  3GTL K;  4BBS K;  3GTQ C;  1Y1W K;  3HOY K;  5M5W K;  2JA5 C;  3S14 K;  5C4X C;  4C3J K;  2JA6 K;  4A3G C;  2BE5 A;  4YFX A;  4Y52 C;  4BY1 K;  4G7O A;  3S2D K;  1TWC C;  1YNN A;  2WAQ D;  4OIN A;  3S1Q C;  4A3J K;  4AYB L;  3RZD K;  3GTM K;  2PA8 L;  4A3E K;  1XPP A;  4C3H C;  5C4X K;  3FKI C;  2Y0S D;  4X6A C;  2PPB A;  4LK1 A;  4A3K C;  1R9T K;  4LLG A;  4A3D K;  1I50 C;  1TWC K;  2PMZ D;  3HKZ D;  5IYD C;  5IYB K;  4A93 C;  5IYC K;  1K83 C;  3HOV K;  2B63 C;  4A3F K;  5TMF A;  4A3L C;  2E2H K;  3HOU K;  4YFN A;  3DXJ A;  1Y1V C;  1TWF K;  2NVT K;  3PO2 K;  2A6H A;  3I4N K;  1I3Q K;  4Y7N K;  5IP9 C;  5IYD K;  2VUM K;  2NVY C;  3I4M C;  2A68 A;  4OIO A;  3RZO C;  4C2M K;  3GTP C;  1TWA K;  5M5X K;  2YU9 K;  1TWG C;  4YG2 A;  3GTO K;  4A3L K;  4MEY A;  5C3E C;  3S16 C;  3S1M C;  4A3I C;  3S2D C;  4BBR C;  5FLM K;  4OIR A;  3GTJ C;  3HOX C;  5IP9 K;  4BXX K;  1SFO K;  3S15 K;  4OIQ A;  2NVY K;  2WAQ L;  2R93 C;  2JA8 C;  3GTQ K;  2NVX C;  3GTP K;  3M3Y C;  2JA5 K;  2WB1 D;  2A6E A;  3S1R C;  3S17 K;  4A3G K;  4Y52 K;  4LK0 A;  3HOW C;  3GTJ K;  3HOX K;  4QIW L;  3S1Q K;  5TMC A;  1IW7 A;  4A3C C;  4OIP A;  1I6H C;  4C3H K;  2E2J C;  3FKI K;  4X6A K;  2O5I A;  3GTG C;  3S1N C;  4A3K K;  1HQM A;  5IP7 C;  3HOZ C;  3HOW K;  2R92 C;  1I50 K;  4Q4Z A;  4KMU A;  4MQ9 A;  2A69 A;  4A93 K;  4KN4 A;  5D4D A;  3M4O C;  1K83 K;  4XSX A;  5C44 C;  2B63 K;  4AYB D;  2CW0 A;  3HOZ K;  5IP7 K;  4XLP A;  1WCM C;  4JK1 A;  4XSZ A;  4A3M C;  1Y1V K;  4LJZ A;  1I6V A;  3GTK C;  5C4J C;  3M4O K;  3H3V D;  3I4M K;  5C44 K;  3RZO K;  4C3I C;  4G7H A;  2JA7 C;  1TWG K;  1TWH C;  3CQZ C;  2E2I C;  2WB1 L;  5C3E K;  4BBS C;  3GTL C;  4A3I K;  2Y0S L;  4BBR K;  3S16 K;  4QJV B;  3HOY C;  1Y1W C;  2NVQ C;  3S14 C;  5M3F K;  1YNJ A;  4C3J C;  2JA6 C;  3S2H C;  2PMZ L;  3HKZ L;  4C3I K;  5FJ8 K;  2NVX K;  2JA8 K;  3M3Y K;  2R93 K;  3S1R K;  4BY1 C;  5M5Y K;  4ZH4 A; 
#chains in the Genus database with same CATH topology
 4GTC A;  4A3B C;  2NVQ K;  4A3D C;  2E2J K;  3S1N K;  1PJ6 A;  2RGR A;  5IYC C;  2R93 A;  3HOV C;  2NVX A;  1VGX A;  1O25 A;  2GAH C;  4KN7 A;  3HOU C;  3K7A C;  3H0G C;  4J3N A;  1WCM K;  1GE9 A;  2VUM C;  1TWA C;  2GAG C;  5HL8 A;  4IOA S;  1X31 C;  4BXX C;  4WF9 S;  4AH6 A;  5JVO A;  3GTQ C;  3GSI A;  1Y1W K;  5M5W K;  2JA5 C;  2JA6 K;  3OPF A;  4G7O A;  2WAQ D;  3S1Q C;  3GTM K;  1O29 A;  1WOP A;  5IOR A;  2Y0S D;  3CQZ A;  2PPB A;  4A3K C;  3LAJ A;  4KMA A;  1I50 C;  1Y1W A;  2PMZ D;  2JA6 A;  3LPX A;  4A3F K;  5TMF A;  3GTM A;  4WJ3 M;  3A8J A;  3JST A;  4YFN A;  1EQR A;  5JFE A;  1HI9 A;  3PO2 K;  4XCH A;  5EGE A;  2EBB A;  1F7U A;  4WCE S;  2JH3 A;  4YG2 A;  2L3U A;  4KM8 A;  5C3E C;  5FLM K;  4FZB A;  4OIR A;  1WSV A;  4LQY A;  1INN A;  3HOX C;  1IS1 A;  3GIR A;  4OIQ A;  3TFJ A;  2R93 C;  2NVX C;  2KXY A;  1BJT A;  1EI6 A;  3HOW C;  3GEH A;  5CHP A;  4O2D A;  1WSR A;  4C3H K;  1WQG A;  2E2J C;  3FKI K;  3S1N C;  2P5M A;  4P5A A;  3GDZ A;  2Y3P A;  4MQ9 A;  4A93 K;  1K83 K;  4C45 A;  3AD7 C;  2B63 K;  4AYB D;  1TWC A;  1WCM C;  2CFA B;  3GEE A;  1Y1V K;  3HXA A;  1DCH A;  1F93 A;  1F9N A;  4M1X A;  4WJ4 A;  3RZO K;  3CQZ C;  3S16 K;  4A3I K;  2VUM A;  1K83 A;  1Y1W C;  4GTD A;  2B63 A;  1EFW A;  1YNJ A;  2JA6 C;  3S2H C;  2GSN A;  3HKZ L;  4C3I K;  2CFA A;  2XCR B;  3N0C A;  4G0V A;  3L4K A;  3GTM C;  1C0A A;  3GTP A;  3PO3 C;  4BY7 C;  4A3C K;  1I6H K;  4Q5S A;  4KAW X;  1XXC A;  3LYW A;  2R7Z K;  4A3F C;  4P5B A;  1USM A;  3TFH A;  4QIW D;  3H3V L;  4NOI A;  1F7V A;  3PO2 C;  4GFQ A;  1I50 A;  4A3M K;  5M3M K;  3AQP A;  3T02 A;  1WQF A;  5IOS A;  4XLN A;  5FLM C;  4KB4 A;  1TWH K;  1WIH A;  3RZD C;  2FQO A;  3WOD A;  3Q3Q A;  3GTL K;  3HOY K;  4KMH A;  3AQO A;  5IOQ A;  5JVG S;  2BE5 A;  1TWC C;  3S17 K;  2XCQ A;  4A3J K;  4A3E K;  1XPP A;  4C3H C;  1J6W A;  5C4X K;  3FKI C;  1TWH A;  5IYD C;  1WQH A;  4GTL A;  4A93 C;  5IYB K;  1K83 C;  3V4G A;  2B63 C;  1Y1V C;  1TWF K;  4RMF A;  2A6H A;  4LR2 A;  1I3Q K;  5IP9 C;  1VJE A;  4C2M K;  4LOW A;  3RZO C;  3GTP C;  2YU9 K;  3GTO K;  4A3L K;  3TFI A;  3S16 C;  1WCM A;  3ORE A;  4A3I C;  4KAS A;  3OEP A;  4DDQ A;  3S15 K;  2P8T A;  2NVY K;  2WAQ L;  1TWF A;  2WB1 D;  4GTB A;  1ZQ1 C;  1I3Q A;  4A3G K;  4Y52 K;  3GTJ K;  3CF5 S;  2YU9 A;  3GTO A;  1IW7 A;  2ZJQ S;  4WIL A;  4A3C C;  1VLO A;  3S0X A;  1I6H C;  1USO A;  4X6A K;  2O5I A;  5IP7 C;  3AD8 C;  2ZJP S;  2L5N A;  4KMU A;  2RH6 A;  1IQ0 A;  2ZUF A;  3M4O C;  2XCO A;  4WFA S;  5JVH S;  3HOZ K;  4XLP A;  4KM9 A;  4JK1 A;  2ZJR S;  4A3M C;  4ILD A;  3I4M K;  5C44 K;  2W7V A;  4G7H A;  1TWH C;  3S1M K;  2ZUE A;  3GTL C;  3HOY C;  2NVQ C;  3AH5 A;  4PAA A;  5M3F K;  1XXA A;  1G51 A;  1V5V A;  2JA8 K;  1BGW A;  1FEU A;  2GSO A;  2E2I K;  3N0B A;  4A3J C;  4A3E C;  1O28 A;  3N3Y A;  1ZYR A;  2KPU A;  4BKW A;  2PA8 D;  3NUH A;  1IE0 A;  5IYB C;  1DCP A;  2R92 K;  4A3B K;  4GT9 A;  3FKI A;  5DM7 S;  3QX3 A;  1TWF C;  1I3Q C;  3L4J A;  1O2B A;  4C2M C;  1J98 A;  2YU9 C;  4P9S A;  3GTO C;  5C4J K;  4IO9 S;  5CJ9 A;  3K7A K;  1Y1V A;  3H0G K;  2JA7 K;  4G7Z A;  1BDF A;  3S15 C;  4A3G C;  5E68 A;  4YFX A;  4Y52 C;  4IOC S;  3S2D K;  3T00 A;  1YNN A;  4OIN A;  1J6X A;  3ERE D;  2JA7 A;  4X6A C;  1KQ4 A;  1R9T K;  1XZQ A;  1B4B A;  3HKZ D;  1DCO A;  3IPJ A;  2E2H K;  3DXJ A;  1ZXO A;  2V6T A;  1BS2 A;  2NVT K;  1RU0 A;  3I4N K;  4BLB A;  4Y7N K;  2R7Z A;  1R9T A;  1VRQ C;  3I4M C;  3SZY A;  5HQH A;  5M5X K;  1O27 A;  3S1M C;  5L46 A;  1O2F B;  4PAB A;  1IBA A;  3G4C A;  3FOF A;  1SFO K;  3A8K A;  2E2H A;  2JA8 C;  4U67 S;  1UV7 A;  1VH2 A;  2A6E A;  1JOE A;  2KWA A;  3GTL A;  4LK0 A;  3HOX K;  5TMC A;  1YCL A;  1JQW A;  4OIP A;  1SFO A;  1O2A A;  3HOW K;  2R92 C;  3G4A A;  4Q4Z A;  1XZP B;  2CW0 A;  3LAP A;  4XSZ A;  4LJZ A;  1I6V A;  4BLA A;  5C4J C;  3PIO S;  4C3I C;  2FQT A;  1B4A A;  2JA7 C;  1TWG K;  3VA7 A;  2WB1 L;  1XZP A;  2Y0S L;  4BBR K;  4QJV B;  2D6F C;  1JVI A;  1IL2 A;  2PMZ L;  3M3Y K;  1XXB A;  3S1R K;  3GEI A;  5M5Y K;  3S2D C;  4ZH4 A;  3CQZ K;  1WOS A;  2ZFZ A;  4YFK A;  2NVY A;  1PJ5 A;  5HL7 S;  1TWG A;  2R7Z C;  3S2H K;  1R9T C;  1O26 A;  1WOR A;  4KAT A;  3GTJ A;  4QJV A;  3GTG K;  3PO3 K;  3FOE A;  4KMD A;  4BY7 K;  2E2H C;  4WFN S;  4GTF A;  2NVT C;  3I4N C;  2V6U A;  5EGH A;  4Y7N C;  4MEX A;  2O5J A;  3SZZ A;  3GTK K;  4KAR A;  3DLL S;  3GTG A;  3EQL A;  4WFB S;  2V6S A;  1SMY A;  3ADA C;  3S17 C;  1SFO C;  4GZY A;  3BUE A;  4BBS K;  3PIP S;  3S14 K;  5C4X C;  4C3J K;  4BY1 K;  3GTK A;  4GTA A;  3RZD K;  5DM6 S;  4AYB L;  2PA8 L;  4LK1 A;  1YX2 A;  5IOT A;  4LLG A;  2E2I A;  4A3D K;  1TWC K;  5IYC K;  3HOV K;  4KB2 A;  4A3L C;  3HOU K;  2R92 A;  5IYD K;  4FM9 A;  1XZQ B;  2VUM K;  2PHC B;  2NVY C;  3AD9 C;  2A68 A;  4OIO A;  1TWA K;  1TWG C;  4MEY A;  4BBR C;  3FHZ A;  3GTJ C;  5IP9 K;  4BXX K;  1ZBS A;  3GTQ K;  3GTP K;  3M3Y C;  2JA5 K;  3S1R C;  3H0G A;  4KC6 A;  1ISE A;  4QIW L;  1TWA A;  3MML B;  3S1Q K;  4G0W A;  3GTG C;  4A3K K;  1HQM A;  3HOZ C;  1PJ7 A;  4GTE A;  3GTQ A;  1I50 K;  2JA5 A;  3A8I A;  2A69 A;  1EK8 A;  4KN4 A;  5D4D A;  4XSX A;  5TJ3 A;  5C44 C;  1WOO A;  2GSU A;  1EH1 A;  5IP7 K;  1O24 A;  2KQ1 A;  3GTK C;  1ZVU A;  1L0W A;  3M4O K;  3H3V D;  3TTG A;  3T01 A;  3BP8 C;  4KDD A;  5C3E K;  2E2I C;  4BBS C;  3CAG A;  4G0U A;  1J6V A;  3S14 C;  1AB4 A;  4C3J C;  1DD5 A;  3BP3 A;  2R93 K;  5FJ8 K;  2NVX K;  4BY1 C; 
#chains in the Genus database with same CATH homology
 3CQZ K;  2E2I K;  3GTM C;  4A3J C;  4YFK A;  4A3E C;  4A3B C;  2NVQ K;  3PO3 C;  2R7Z C;  3S2H K;  1ZYR A;  4BY7 C;  1R9T C;  4A3C K;  4A3D C;  1I6H K;  2E2J K;  4Q5S A;  4QJV A;  2PA8 D;  3GTG K;  3S1N K;  5IYB C;  5IYC C;  2R92 K;  3HOV C;  4A3B K;  3PO3 K;  2R7Z K;  4A3F C;  4BY7 K;  4KN7 A;  2E2H C;  3HOU C;  4QIW D;  3H3V L;  4NOI A;  3K7A C;  1TWF C;  3H0G C;  2NVT C;  3PO2 C;  3I4N C;  1I3Q C;  4Y7N C;  3S1M K;  1WCM K;  2VUM C;  4A3M K;  5M3M K;  4MEX A;  4C2M C;  2O5J A;  3GTK K;  1TWA C;  2YU9 C;  3GTO C;  5C4J K;  3EQL A;  4XLN A;  3K7A K;  5FLM C;  3H0G K;  1SMY A;  2JA7 K;  4G7Z A;  4BXX C;  1TWH K;  1BDF A;  3S17 C;  1SFO C;  3S15 C;  3RZD C;  4GZY A;  3WOD A;  3GTL K;  4BBS K;  3GTQ C;  1Y1W K;  3HOY K;  5M5W K;  2JA5 C;  3S14 K;  5C4X C;  4C3J K;  2JA6 K;  4A3G C;  2BE5 A;  4YFX A;  4Y52 C;  4BY1 K;  4G7O A;  3S2D K;  1TWC C;  1YNN A;  2WAQ D;  4OIN A;  3S1Q C;  4A3J K;  4AYB L;  3RZD K;  3GTM K;  2PA8 L;  4A3E K;  1XPP A;  4C3H C;  5C4X K;  3FKI C;  2Y0S D;  4X6A C;  2PPB A;  4LK1 A;  4A3K C;  1R9T K;  4LLG A;  4A3D K;  1I50 C;  1TWC K;  2PMZ D;  3HKZ D;  5IYD C;  5IYB K;  4A93 C;  5IYC K;  1K83 C;  3HOV K;  2B63 C;  4A3F K;  5TMF A;  4A3L C;  2E2H K;  3HOU K;  4YFN A;  3DXJ A;  1Y1V C;  1TWF K;  2NVT K;  3PO2 K;  2A6H A;  3I4N K;  1I3Q K;  4Y7N K;  5IP9 C;  5IYD K;  2VUM K;  2NVY C;  3I4M C;  2A68 A;  4OIO A;  3RZO C;  4C2M K;  3GTP C;  1TWA K;  5M5X K;  2YU9 K;  1TWG C;  4YG2 A;  3GTO K;  4A3L K;  4MEY A;  5C3E C;  3S16 C;  3S1M C;  4A3I C;  3S2D C;  4BBR C;  5FLM K;  4OIR A;  3GTJ C;  3HOX C;  5IP9 K;  4BXX K;  1SFO K;  3S15 K;  4OIQ A;  2NVY K;  2WAQ L;  2R93 C;  2JA8 C;  3GTQ K;  2NVX C;  3GTP K;  3M3Y C;  2JA5 K;  2WB1 D;  2A6E A;  3S1R C;  3S17 K;  4A3G K;  4Y52 K;  4LK0 A;  3HOW C;  3GTJ K;  3HOX K;  4QIW L;  3S1Q K;  5TMC A;  1IW7 A;  4A3C C;  4OIP A;  1I6H C;  4C3H K;  2E2J C;  3FKI K;  4X6A K;  2O5I A;  3GTG C;  3S1N C;  4A3K K;  1HQM A;  5IP7 C;  3HOZ C;  3HOW K;  2R92 C;  1I50 K;  4Q4Z A;  4KMU A;  4MQ9 A;  2A69 A;  4A93 K;  4KN4 A;  5D4D A;  3M4O C;  1K83 K;  4XSX A;  5C44 C;  2B63 K;  4AYB D;  2CW0 A;  3HOZ K;  5IP7 K;  4XLP A;  1WCM C;  4JK1 A;  4XSZ A;  4A3M C;  1Y1V K;  4LJZ A;  1I6V A;  3GTK C;  5C4J C;  3M4O K;  3H3V D;  3I4M K;  5C44 K;  3RZO K;  4C3I C;  4G7H A;  2JA7 C;  1TWG K;  1TWH C;  3CQZ C;  2E2I C;  2WB1 L;  5C3E K;  4BBS C;  3GTL C;  4A3I K;  2Y0S L;  4BBR K;  3S16 K;  4QJV B;  3HOY C;  1Y1W C;  2NVQ C;  3S14 C;  5M3F K;  1YNJ A;  4C3J C;  2JA6 C;  3S2H C;  2PMZ L;  3HKZ L;  4C3I K;  5FJ8 K;  2NVX K;  2JA8 K;  3M3Y K;  2R93 K;  3S1R K;  4BY1 C;  5M5Y K;  4ZH4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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