4Z0RA

Crystal structure of the cw domain of zcwpw2 mutant f78r in complex with histone h3 peptide
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
57
structure length
57
Chain Sequence
ENMYVNKVWVQCENENCLKWRLLSSEDSAKVDHDEPWYCFMNTDSRYNNCSISEEDR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein binding/structural protein
molecule keywords Zinc finger CW-type PWWP domain protein 2
publication title Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
rcsb
source organism Homo sapiens
total genus 10
structure length 57
sequence length 57
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2015-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07496 zf-CW CW-type Zinc Finger
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.100 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Herpes Virus-1 4z0rA00
5SVIB 2E61A 4Z0OA 4QQ4A 5SVYA 4Z0RA 5SVIA 5SVXA 2L7PA 4O62A 2RR4A
chains in the Genus database with same CATH superfamily
1T1HA 4GNEA 3HCUA 3MHSA 5FEYA 2OXQC 3FANA 1X4IA 1JM7A 2CRRA 3DPLR 4TKPB 2DSMA 3RPGB 1WIMA 4IC3A 4N4FA 3DQVR 2NAAA 2LQ6A 2YQMA 4YAXA 4V3KC 2EGPA 3ASLA 3ZPVE 4YBMA 3O37A 4MSXA 4AYCB 1WGMA 1K2FA 2CSVA 2XP0A 2RSDA 4PTBA 1WEUA 2EA6A 3ZNIA 3FEHA 2CKLA 5B78A 2G6QA 3RPGC 4QQ4A 1WEPA 1FP0A 2FSAA 5DINA 4Q6FA 2ECWA 4QF3A 2ECNA 1LDJB 2QICA 3LVRE 2I50A 1WILA 2F6JA 2KKYA 4ZQLA 2VJFB 4LK9A 3C6WA 4A4BA 2CRWA 2VJEA 5SVIB 3KQIA 3GL6A 2KFTA 4I7DA 1HYJA 3L11A 2RR4A 4GNFA 1WEQA 4BHWA 1JOCA 3EB5A 3MDBC 5FB1A 2HYED 2XOCA 2CKLB 2LGVA 5TBNA 4C9ZA 1E4UA 2EODA 2M13A 2FD4A 3LQHA 2F42A 3HCSA 2VP7A 2LAUA 4I7BA 5KH9A 5SVYA 5LKZA 5FB0A 2XOYA 3GV4A 4R2YA 2MD7B 2L43A 2JM3A 2YW8A 1VYXA 4LKAA 3ZPV1 3N9MA 3DWDA 3FL2A 3KV6A 5B75A 5TRBA 2UZGA 1WESA 2KYUA 4BBQA 3PUQA 2MUMA 2D8SA 2JMDA 2ECJA 5LKUA 5H1UA 3LQIA 1X4JA 4YC9A 3M99A 5B8DA 1WENA 2YQLA 2QJ0A 1N87A 3T6RA 1DVPA 3KNVA 2YURA 2L5UA 5H9MA 2LGKA 4H9DA 3N9PA 2MKEA 4L7XA 2KWKA 5G04B 1F62A 4MVTA 1FBVA 4LADB 4QF2A 2VPBA 3PHDA 2VPGA 3KV5A 2PNXA 2XB1A 2G43A 4YABA 2JMJA 2K17A 2OWAA 4UI9B 2LV9A 4LJNA 3JUEA 3SOXA 2KGGA 4N3WA 2KE1A 2L75A 2JMIA 2Y1MA 4PPEA 2L80A 2YUCA 3SHBA 3SOWA 5AIUA 2JUNA 2IQJA 2KR4A 1V87A 3L1ZB 5B79A 2ECTA 3MHHA 5G05B 3ZVZB 3M62A 5LKTA 4R8PK 4UP0A 2CSZA 1DCQA 5TDRA 2KU3A 2QIZA 2FUIA 4FK5A 1JM7B 4CA1A 3HCTA 4YBSA 4AVXA 3O35A 2ECGA 2M1RA 3I2DA 2E61A 2LRIC 5I3LA 2B0OE 5DKAA 2C2VS 3PURA 2E6SA 4YBTA 2H0DA 5K3QA 1Z2QA 4YADA 3RTRB 1MBMA 5C11A 3L1XA 2VNFA 4F52B 3VK6A 4O62A 3U5PA 2ECVA 3Q1DA 3U5OA 5KH7A 5G0FA 2M85A 2G45A 3QZVA 2YVRA 2LXPC 2EXUA 4GB0A 4F1PA 5TABA 4S3OB 1U6GB 2LXHC 5C13A 2VPDA 3O70A 2VJEB 1RMDA 2C2LA 1WEEA 2YSJA 4WZ3B 3U5MA 2MIQA 2K1JA 3ZYQA 3N9QA 3E2DA 5LCWB 4AYCA 4XI1A 3M63A 5H1TA 2K4DA 4Z0RA 4A49A 2AN6A 2DX8A 5D1MB 4CCGX 1VD4A 3H7HA 4S3OC 1LDKC 3LQJA 1CHCA 4L58A 4NN2A 5JG6A 2EGMA 4FO9A 4LLBA 4W4UA 3EB6A 2KIZA 2YHNA 2RI7A 1G25A 3T7LA 4FIPA 4I7CA 2Y1NA 4GNDA 3T9KA 3C5KA 2XOZA 2LDRA 2LN0A 4V3LC 4X3GA 2ECIA 3FM8C 3ZTGA 3KDEC 1Z60A 1WEVA 4WA6A 4GNGA 2BAYA 3SOUA 2KGIA 2VJFA 1WEWA 4A0CD 5SVIA 2Y43A 3LVQE 2CSYA 2LGGA 2MA6A 4A4CA 5FERA 5B76A 2DJAA 2XEUA 1ZBDB 2FFWA 2MT5A 2ZETC 2VPEA 2M3HA 3O34A 1MM3A 2CT2A 2MNYA 2YT5A 2L0BA 4ZDTA 1HYIA 5H1VA 2IDAA 5EYAF 5LKXA 2YREA 1IYMA 3N9NA 3LDYA 2HDPA 5AITA 2KREA 3M7KA 5D1KB 1VFYA 2MA5A 3LJUX 5D1LB 3N9OA 5TDWA 2MD8C 2MNZA 2K16A 3N9LA 3V43A 5B77A 4YATA 3DDTA 3FJUB 3O47A 2YU4A 3FAOA 4OGEA 4P5OB 1MM2A 2KWNA 3PLWA 3ZVYA 4OGCA 3O36A 5J3XA 4UP5A 1WEOA 2FUUA 3IHPA 4B7YC 3SUBA 4B86C 4Z0OA 1WE9A 1Z6UA 3HTKC 2L7PA 5KH3A 4O64A 4AP4A 2YSMA 5SVXA 4ZUXU 2H0DB 2KWJA 1WFKA 2E6RA 4R7EA 3O7AA 2LGLA 1WEMA 2F6NA 2KKXA 2YYRA 2KWOA 3LRQA 2CONA 2PUYA 2YHOA 1BORA 4IC2A 3U5NA 3O33A 2P57A 2JRJA 4AUQB 3NG2A 4WZ0A 1XWHA 2D8UA 4FJCA 1X4UA 4WZ2A 2M6MA
chains in the Genus database with same CATH topology
3DWDA 2DJAA 2YREA 2YVRA 2EXUA 5K3QA 3LDYA 4F1PA 2XOCA 3PLWA 4H9DA 4Z0RA 2CRRA 2FFWA 2MKEA 3FM8C 3LVRE 2KKXA 3KDEC 3FEHA 4OGCA 2M13A 3M7KA 3LJUX 2FD4A 2KKYA 2CONA 3H7HA 2JUNA 2IQJA 4O62A 3SUBA 2CRWA 3Q1DA 2LAUA 5SVIB 2E61A 4Z0OA 4QQ4A 2EGMA 5SVYA 2XOYA 2B0OE 5SVIA 2L7PA 2XOZA 2RR4A 2JM3A 2P57A 3LVQE 2OWAA 1DCQA 3DDTA 2D8UA 2XP0A 3E2DA 3FJUB 3O47A 5SVXA 3T9KA 3JUEA 2CSVA 3MDBC 4OGEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5SVI B;  2E61 A;  4Z0O A;  4QQ4 A;  5SVY A;  4Z0R A;  5SVI A;  5SVX A;  2L7P A;  4O62 A;  2RR4 A; 
#chains in the Genus database with same CATH topology
 1T1H A;  4GNE A;  3HCU A;  3MHS A;  5FEY A;  2OXQ C;  3FAN A;  1X4I A;  1JM7 A;  2CRR A;  3DPL R;  4TKP B;  2DSM A;  3RPG B;  1WIM A;  4IC3 A;  4N4F A;  3DQV R;  2NAA A;  2LQ6 A;  2YQM A;  4YAX A;  4V3K C;  2EGP A;  3ASL A;  3ZPV E;  4YBM A;  3O37 A;  4MSX A;  4AYC B;  1WGM A;  1K2F A;  2CSV A;  2XP0 A;  2RSD A;  4PTB A;  1WEU A;  2EA6 A;  3ZNI A;  3FEH A;  2CKL A;  5B78 A;  2G6Q A;  3RPG C;  4QQ4 A;  1WEP A;  1FP0 A;  2FSA A;  5DIN A;  4Q6F A;  2ECW A;  4QF3 A;  2ECN A;  1LDJ B;  2QIC A;  3LVR E;  2I50 A;  1WIL A;  2F6J A;  2KKY A;  4ZQL A;  2VJF B;  4LK9 A;  3C6W A;  4A4B A;  2CRW A;  2VJE A;  5SVI B;  3KQI A;  3GL6 A;  2KFT A;  4I7D A;  1HYJ A;  3L11 A;  2RR4 A;  4GNF A;  1WEQ A;  4BHW A;  1JOC A;  3EB5 A;  3MDB C;  5FB1 A;  2HYE D;  2XOC A;  2CKL B;  2LGV A;  5TBN A;  4C9Z A;  1E4U A;  2EOD A;  2M13 A;  2FD4 A;  3LQH A;  2F42 A;  3HCS A;  2VP7 A;  2LAU A;  4I7B A;  5KH9 A;  5SVY A;  5LKZ A;  5FB0 A;  2XOY A;  3GV4 A;  4R2Y A;  2MD7 B;  2L43 A;  2JM3 A;  2YW8 A;  1VYX A;  4LKA A;  3ZPV 1;  3N9M A;  3DWD A;  3FL2 A;  3KV6 A;  5B75 A;  5TRB A;  2UZG A;  1WES A;  2KYU A;  4BBQ A;  3PUQ A;  2MUM A;  2D8S A;  2JMD A;  2ECJ A;  5LKU A;  5H1U A;  3LQI A;  1X4J A;  4YC9 A;  3M99 A;  5B8D A;  1WEN A;  2YQL A;  2QJ0 A;  1N87 A;  3T6R A;  1DVP A;  3KNV A;  2YUR A;  2L5U A;  5H9M A;  2LGK A;  4H9D A;  3N9P A;  2MKE A;  4L7X A;  2KWK A;  5G04 B;  1F62 A;  4MVT A;  1FBV A;  4LAD B;  4QF2 A;  2VPB A;  3PHD A;  2VPG A;  3KV5 A;  2PNX A;  2XB1 A;  2G43 A;  4YAB A;  2JMJ A;  2K17 A;  2OWA A;  4UI9 B;  2LV9 A;  4LJN A;  3JUE A;  3SOX A;  2KGG A;  4N3W A;  2KE1 A;  2L75 A;  2JMI A;  2Y1M A;  4PPE A;  2L80 A;  2YUC A;  3SHB A;  3SOW A;  5AIU A;  2JUN A;  2IQJ A;  2KR4 A;  1V87 A;  3L1Z B;  5B79 A;  2ECT A;  3MHH A;  5G05 B;  3ZVZ B;  3M62 A;  5LKT A;  4R8P K;  4UP0 A;  2CSZ A;  1DCQ A;  5TDR A;  2KU3 A;  2QIZ A;  2FUI A;  4FK5 A;  1JM7 B;  4CA1 A;  3HCT A;  4YBS A;  4AVX A;  3O35 A;  2ECG A;  2M1R A;  3I2D A;  2E61 A;  2LRI C;  5I3L A;  2B0O E;  5DKA A;  2C2V S;  3PUR A;  2E6S A;  4YBT A;  2H0D A;  5K3Q A;  1Z2Q A;  4YAD A;  3RTR B;  1MBM A;  5C11 A;  3L1X A;  2VNF A;  4F52 B;  3VK6 A;  4O62 A;  3U5P A;  2ECV A;  3Q1D A;  3U5O A;  5KH7 A;  5G0F A;  2M85 A;  2G45 A;  3QZV A;  2YVR A;  2LXP C;  2EXU A;  4GB0 A;  4F1P A;  5TAB A;  4S3O B;  1U6G B;  2LXH C;  5C13 A;  2VPD A;  3O70 A;  2VJE B;  1RMD A;  2C2L A;  1WEE A;  2YSJ A;  4WZ3 B;  3U5M A;  2MIQ A;  2K1J A;  3ZYQ A;  3N9Q A;  3E2D A;  5LCW B;  4AYC A;  4XI1 A;  3M63 A;  5H1T A;  2K4D A;  4Z0R A;  4A49 A;  2AN6 A;  2DX8 A;  5D1M B;  4CCG X;  1VD4 A;  3H7H A;  4S3O C;  1LDK C;  3LQJ A;  1CHC A;  4L58 A;  4NN2 A;  5JG6 A;  2EGM A;  4FO9 A;  4LLB A;  4W4U A;  3EB6 A;  2KIZ A;  2YHN A;  2RI7 A;  1G25 A;  3T7L A;  4FIP A;  4I7C A;  2Y1N A;  4GND A;  3T9K A;  3C5K A;  2XOZ A;  2LDR A;  2LN0 A;  4V3L C;  4X3G A;  2ECI A;  3FM8 C;  3ZTG A;  3KDE C;  1Z60 A;  1WEV A;  4WA6 A;  4GNG A;  2BAY A;  3SOU A;  2KGI A;  2VJF A;  1WEW A;  4A0C D;  5SVI A;  2Y43 A;  3LVQ E;  2CSY A;  2LGG A;  2MA6 A;  4A4C A;  5FER A;  5B76 A;  2DJA A;  2XEU A;  1ZBD B;  2FFW A;  2MT5 A;  2ZET C;  2VPE A;  2M3H A;  3O34 A;  1MM3 A;  2CT2 A;  2MNY A;  2YT5 A;  2L0B A;  4ZDT A;  1HYI A;  5H1V A;  2IDA A;  5EYA F;  5LKX A;  2YRE A;  1IYM A;  3N9N A;  3LDY A;  2HDP A;  5AIT A;  2KRE A;  3M7K A;  5D1K B;  1VFY A;  2MA5 A;  3LJU X;  5D1L B;  3N9O A;  5TDW A;  2MD8 C;  2MNZ A;  2K16 A;  3N9L A;  3V43 A;  5B77 A;  4YAT A;  3DDT A;  3FJU B;  3O47 A;  2YU4 A;  3FAO A;  4OGE A;  4P5O B;  1MM2 A;  2KWN A;  3PLW A;  3ZVY A;  4OGC A;  3O36 A;  5J3X A;  4UP5 A;  1WEO A;  2FUU A;  3IHP A;  4B7Y C;  3SUB A;  4B86 C;  4Z0O A;  1WE9 A;  1Z6U A;  3HTK C;  2L7P A;  5KH3 A;  4O64 A;  4AP4 A;  2YSM A;  5SVX A;  4ZUX U;  2H0D B;  2KWJ A;  1WFK A;  2E6R A;  4R7E A;  3O7A A;  2LGL A;  1WEM A;  2F6N A;  2KKX A;  2YYR A;  2KWO A;  3LRQ A;  2CON A;  2PUY A;  2YHO A;  1BOR A;  4IC2 A;  3U5N A;  3O33 A;  2P57 A;  2JRJ A;  4AUQ B;  3NG2 A;  4WZ0 A;  1XWH A;  2D8U A;  4FJC A;  1X4U A;  4WZ2 A;  2M6M A; 
#chains in the Genus database with same CATH homology
 3DWD A;  2DJA A;  2YRE A;  2YVR A;  2EXU A;  5K3Q A;  3LDY A;  4F1P A;  2XOC A;  3PLW A;  4H9D A;  4Z0R A;  2CRR A;  2FFW A;  2MKE A;  3FM8 C;  3LVR E;  2KKX A;  3KDE C;  3FEH A;  4OGC A;  2M13 A;  3M7K A;  3LJU X;  2FD4 A;  2KKY A;  2CON A;  3H7H A;  2JUN A;  2IQJ A;  4O62 A;  3SUB A;  2CRW A;  3Q1D A;  2LAU A;  5SVI B;  2E61 A;  4Z0O A;  4QQ4 A;  2EGM A;  5SVY A;  2XOY A;  2B0O E;  5SVI A;  2L7P A;  2XOZ A;  2RR4 A;  2JM3 A;  2P57 A;  3LVQ E;  2OWA A;  1DCQ A;  3DDT A;  2D8U A;  2XP0 A;  3E2D A;  3FJU B;  3O47 A;  5SVX A;  3T9K A;  3JUE A;  2CSV A;  3MDB C;  4OGE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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