5HV8A

Solution structure of an octanoyl- loaded acyl carrier protein domain from module mlsa2 of the mycolactone polyketide synthase.
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
95
structure length
95
Chain Sequence
GSHMRLNGLSPQQQQQTLATLVAAATATVLGHHTPESISPATAFKDLGIDSLTALELRNTLTHNTGLDLPPTLIFDHPTPHALTQHLHTRLTQSH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Type I modular polyketide synthase
publication title Sticky swinging arm dynamics: studies of an acyl carrier protein domain from the mycolactone polyketide synthase.
pubmed doi rcsb
source organism Mycobacterium ulcerans
total genus 26
structure length 95
sequence length 95
ec nomenclature
pdb deposition date 2016-01-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 5hv8A00
4CA3A 2KR5A 2MVVA 2K94A 2N6YA 2KG6A 2JQ4A 5KP7B 2L22A 4BPHA 2GDYA 2K93A 5HV8A 2N6ZA 1T8KA 2KGEA 2KOQA 1L0HA 2K0YA 2FVAA 2AVAA 5CZDB 1OR5A 2KW2A 2CQ8A 3EJEA 1L0IA 5HVCA 2K0XA 2L0QA 2KOOA 2FQ2A 4IZ6A 4BPFA 2LKIA 2N98A 4R0MA 1HY8A 2KGAA 3GZLA 1KLPA 2FQ1A 2KGCA 2VSQA 2EHTA 1VKUA 2X2BA 2EHSA 3LMOA 2LOLA 4H2XC 2MVUA 2FVEA 4H2WC 3CE7A 2GDWA 1AF8A 2DNWA 2MD9A 4NEOA 2CG5B 2QNWA 3NY7B 1F80D 2KWLA 2FVFA 2LIUA 2N5HA 1DV5A 2KORA 2JU1A 5EJDA 2K92A 2N5IA 2CNRA 2LMLA 3RG2A 3EJBA 4PWVB 2MY5A 2ROQA 2KGDA 5KP6B 2FAEA 2KOSA 2XZ1C 2MR7A 4H2YC 2GDXA 4PXHB 2FADA 4BPGA 2LPKA 2LTEA 2KG9A 2K2QA 2MF4A 2PNGA 3GZMA 4HKGA 1NQ4A 3EJDA 2LIWA 2FQ0A 1DNYA 2N50A 2L9FA 4DG9A 2XZ0D 2AFDA 2M5RA 1ACPA 2KG8A 2AF8A 2JGPA 5KP8B 2FHSC 2AFEA 2JU2A 2L4BA 4MRTC 2FACA 1HQBA 2KOPA 2LL8A 2CGQA 2MR8A 1X3OA
chains in the Genus database with same CATH superfamily
4IPYA 4CA3A 2MVVA 1S72P 2GZIA 2GDYA 2GYKA 2JBGA 1IMQA 2PEIA 2VLOA 1YJWP 1L0HA 2K0YA 1VQPP 1RNIA 2E1MA 3B4QA 1L0IA 1VQLP 1YITP 4XFYA 3WBHA 2FQ2A 4BPFA 4R0MA 4XRQA 3DS3A 1HY8A 1VQMP 4PH0A 5HGNA 5HGMA 3CCRP 2VSQA 1QRJA 3CCLP 5EW5E 3LMOA 2LOLA 2FVEA 2BUOA 5DCKA 1K30A 3NY7B 5HGOA 2JU1A 1M6NA 2N5IA 2PENA 3CC7P 3OW2O 2M8NA 2ROQA 4U0FA 2FAEA 2XZ1C 1Q86Q 5BS1A 1Z6MA 2JYLA 1VQKP 2LTEA 1VQ5P 3CCEP 1VQNP 1KC8Q 1BXIA 1VHNA 1EOQA 1DNYA 1IUQA 2L9FA 4DG9A 2EIAA 2PEJA 4XROA 2XXMA 2JGPA 4QNBA 2JB0A 2GZGA 2L4BA 2GZFA 2LL8A 1KQSO 1EIAA 2KR5A 2VLNA 1ZNVA 2N6YA 2KG6A 2JQ4A 2PEMA 2L22A 3DS1A 4BPHA 3CCJP 3DPHA 5BS2A 1M1KQ 5HV8A 2N6ZA 1T8KA 1IMPA 3E2DA 1K9MQ 2JAZA 1AUMA 1MZ8A 1OR5A 3GKLC 3CMEP 3VRLC 1KD1Q 3CC2P 3CC4P 1A8OA 2BHVA 2FQ1A 2Z45A 1VKUA 2X2BA 2EHSA 3MGEA 2QA4P 2M8PA 1VQ9P 2MVUA 4XFXA 1CEIA 3CE7A 1YHQP 2GDWA 3H4EA 4F37A 5HGLA 3CPWO 2DNWA 2CG5B 1F80D 3DS2A 2FVFA 4UHPB 2P9XA 4COPA 2KORA 1BAJA 5EJDA 2K92A 2LMLA 5I4TG 2MY5A 2KGDA 4H2YC 4PXHB 1QVGO 2EFJA 2LPKA 1Q82Q 2XT1A 5F2NA 3RG6C 1QVFO 3EJDA 3CCSP 2N50A 3G1GA 1ACPA 4U0CA 1M6EX 1RO0A 3G26A 5KP8B 4GR6A 3CCMP 2AFEA 2JU2A 3U43A 4U0DA 1HQBA 2MR8A 1VQ8P 3DS5A 3I55P 1E0HA 5KP7B 1ZMBA 1W2BO 3G21A 3CMAP 2PEOA 1K8AQ 2K93A 2VLQA 2QEXP 3HYBA 2KOQA 3GJNA 2FVAA 2AVAA 4U0BA 2LF4A 3B5IA 1VQOP 2KW2A 2XV6A 1FR2A 3CCQP 1Q7YQ 2K0XA 2L0QA 2Z46A 1GPJA 3CXCO 2K5XA 4U0EA 1E6JP 2ONTA 2OARA 2LKIA 2N98A 3DTJA 4GR2A 2KGAA 3GZLA 1A43A 1KLPA 3LRYA 2EHTA 4COCA 1VQ4P 3G1IA 2MD9A 4NEOA 3G0VA 1RO2A 2JO0A 3H47A 1DV5A 1Q81Q 3DS4A 2Z44A 2CNRA 3RG2A 1N8RQ 3EJBA 3HZQA 3CCUP 1YIJP 1EMVA 2GDXA 2MF4A 3CD6P 3GZMA 1NQ4A 2LIWA 2FQ0A 3DS0A 3G71P 4WYMA 1YI2P 2AFDA 1GXGA 2M5RA 2M8LA 3M1MA 2KODA 2FHSC 4PH1A 4MRTC 2WPTA 4M0IA 2FACA 2EG5A 2OTJP 1VQ6P 1X3OA 2K94A 2VLPA 1YJNP 4XFZA 1K73Q 3G28A 2KGEA 5CZDB 1VQ7P 2CQ8A 3EJEA 2GZJA 5HVCA 3G6EP 2KOOA 2GZEA 4IZ6A 1AYIA 7CEIA 3I56P 1JJ2O 2KGCA 3G29A 2L6EA 2DGYA 2PEKA 4H2XC 4H2WC 5JPAA 3CCVP 3P05A 1AF8A 1D1DA 2JYGA 2K0DX 2QNWA 2KWLA 1UJZA 2PEQA 1UNKA 2LIUA 2N5HA 1YJ9P 4PWVB 5KP6B 2KOSA 2MR7A 2FADA 4BPGA 2KG9A 2OTLP 2K2QA 1M74A 2PNGA 3Q20A 2ERHA 4HKGA 4U0AA 2NO8A 2CWOA 2XZ0D 5F2KA 2KG8A 2AF8A 1M90Q 3NTEA 5F2OA 3H0DA 4QKOA 2KOPA 2PY8A 2CGQA 1NJIQ 3G4SP 1GXHA
chains in the Genus database with same CATH topology
4CA3A 2KR5A 2MVVA 2K94A 2N6YA 2KG6A 2JQ4A 5KP7B 2L22A 4BPHA 2GDYA 2K93A 5HV8A 2N6ZA 1T8KA 2KGEA 2KOQA 1L0HA 2K0YA 2FVAA 2AVAA 5CZDB 1OR5A 2KW2A 2CQ8A 3EJEA 1L0IA 5HVCA 2K0XA 2L0QA 2KOOA 2FQ2A 4IZ6A 4BPFA 2LKIA 2N98A 4R0MA 1HY8A 2KGAA 3GZLA 1KLPA 2FQ1A 2KGCA 2VSQA 2EHTA 1VKUA 2X2BA 2EHSA 3LMOA 2LOLA 4H2XC 2MVUA 2FVEA 4H2WC 3CE7A 2GDWA 1AF8A 2DNWA 2MD9A 4NEOA 2CG5B 2QNWA 3NY7B 1F80D 2KWLA 2FVFA 2LIUA 2N5HA 1DV5A 2KORA 2JU1A 5EJDA 2K92A 2N5IA 2CNRA 2LMLA 3RG2A 3EJBA 4PWVB 2MY5A 2ROQA 2KGDA 5KP6B 2FAEA 2KOSA 2XZ1C 2MR7A 4H2YC 2GDXA 4PXHB 2FADA 4BPGA 2LPKA 2LTEA 2KG9A 2K2QA 2MF4A 2PNGA 3GZMA 4HKGA 1NQ4A 3EJDA 2LIWA 2FQ0A 1DNYA 2N50A 2L9FA 4DG9A 2XZ0D 2AFDA 2M5RA 1ACPA 2KG8A 2AF8A 2JGPA 5KP8B 2FHSC 2AFEA 2JU2A 2L4BA 4MRTC 2FACA 1HQBA 2KOPA 2LL8A 2CGQA 2MR8A 1X3OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CA3 A;  2KR5 A;  2MVV A;  2K94 A;  2N6Y A;  2KG6 A;  2JQ4 A;  5KP7 B;  2L22 A;  4BPH A;  2GDY A;  2K93 A;  5HV8 A;  2N6Z A;  1T8K A;  2KGE A;  2KOQ A;  1L0H A;  2K0Y A;  2FVA A;  2AVA A;  5CZD B;  1OR5 A;  2KW2 A;  2CQ8 A;  3EJE A;  1L0I A;  5HVC A;  2K0X A;  2L0Q A;  2KOO A;  2FQ2 A;  4IZ6 A;  4BPF A;  2LKI A;  2N98 A;  4R0M A;  1HY8 A;  2KGA A;  3GZL A;  1KLP A;  2FQ1 A;  2KGC A;  2VSQ A;  2EHT A;  1VKU A;  2X2B A;  2EHS A;  3LMO A;  2LOL A;  4H2X C;  2MVU A;  2FVE A;  4H2W C;  3CE7 A;  2GDW A;  1AF8 A;  2DNW A;  2MD9 A;  4NEO A;  2CG5 B;  2QNW A;  3NY7 B;  1F80 D;  2KWL A;  2FVF A;  2LIU A;  2N5H A;  1DV5 A;  2KOR A;  2JU1 A;  5EJD A;  2K92 A;  2N5I A;  2CNR A;  2LML A;  3RG2 A;  3EJB A;  4PWV B;  2MY5 A;  2ROQ A;  2KGD A;  5KP6 B;  2FAE A;  2KOS A;  2XZ1 C;  2MR7 A;  4H2Y C;  2GDX A;  4PXH B;  2FAD A;  4BPG A;  2LPK A;  2LTE A;  2KG9 A;  2K2Q A;  2MF4 A;  2PNG A;  3GZM A;  4HKG A;  1NQ4 A;  3EJD A;  2LIW A;  2FQ0 A;  1DNY A;  2N50 A;  2L9F A;  4DG9 A;  2XZ0 D;  2AFD A;  2M5R A;  1ACP A;  2KG8 A;  2AF8 A;  2JGP A;  5KP8 B;  2FHS C;  2AFE A;  2JU2 A;  2L4B A;  4MRT C;  2FAC A;  1HQB A;  2KOP A;  2LL8 A;  2CGQ A;  2MR8 A;  1X3O A; 
#chains in the Genus database with same CATH topology
 4IPY A;  4CA3 A;  2MVV A;  1S72 P;  2GZI A;  2GDY A;  2GYK A;  2JBG A;  1IMQ A;  2PEI A;  2VLO A;  1YJW P;  1L0H A;  2K0Y A;  1VQP P;  1RNI A;  2E1M A;  3B4Q A;  1L0I A;  1VQL P;  1YIT P;  4XFY A;  3WBH A;  2FQ2 A;  4BPF A;  4R0M A;  4XRQ A;  3DS3 A;  1HY8 A;  1VQM P;  4PH0 A;  5HGN A;  5HGM A;  3CCR P;  2VSQ A;  1QRJ A;  3CCL P;  5EW5 E;  3LMO A;  2LOL A;  2FVE A;  2BUO A;  5DCK A;  1K30 A;  3NY7 B;  5HGO A;  2JU1 A;  1M6N A;  2N5I A;  2PEN A;  3CC7 P;  3OW2 O;  2M8N A;  2ROQ A;  4U0F A;  2FAE A;  2XZ1 C;  1Q86 Q;  5BS1 A;  1Z6M A;  2JYL A;  1VQK P;  2LTE A;  1VQ5 P;  3CCE P;  1VQN P;  1KC8 Q;  1BXI A;  1VHN A;  1EOQ A;  1DNY A;  1IUQ A;  2L9F A;  4DG9 A;  2EIA A;  2PEJ A;  4XRO A;  2XXM A;  2JGP A;  4QNB A;  2JB0 A;  2GZG A;  2L4B A;  2GZF A;  2LL8 A;  1KQS O;  1EIA A;  2KR5 A;  2VLN A;  1ZNV A;  2N6Y A;  2KG6 A;  2JQ4 A;  2PEM A;  2L22 A;  3DS1 A;  4BPH A;  3CCJ P;  3DPH A;  5BS2 A;  1M1K Q;  5HV8 A;  2N6Z A;  1T8K A;  1IMP A;  3E2D A;  1K9M Q;  2JAZ A;  1AUM A;  1MZ8 A;  1OR5 A;  3GKL C;  3CME P;  3VRL C;  1KD1 Q;  3CC2 P;  3CC4 P;  1A8O A;  2BHV A;  2FQ1 A;  2Z45 A;  1VKU A;  2X2B A;  2EHS A;  3MGE A;  2QA4 P;  2M8P A;  1VQ9 P;  2MVU A;  4XFX A;  1CEI A;  3CE7 A;  1YHQ P;  2GDW A;  3H4E A;  4F37 A;  5HGL A;  3CPW O;  2DNW A;  2CG5 B;  1F80 D;  3DS2 A;  2FVF A;  4UHP B;  2P9X A;  4COP A;  2KOR A;  1BAJ A;  5EJD A;  2K92 A;  2LML A;  5I4T G;  2MY5 A;  2KGD A;  4H2Y C;  4PXH B;  1QVG O;  2EFJ A;  2LPK A;  1Q82 Q;  2XT1 A;  5F2N A;  3RG6 C;  1QVF O;  3EJD A;  3CCS P;  2N50 A;  3G1G A;  1ACP A;  4U0C A;  1M6E X;  1RO0 A;  3G26 A;  5KP8 B;  4GR6 A;  3CCM P;  2AFE A;  2JU2 A;  3U43 A;  4U0D A;  1HQB A;  2MR8 A;  1VQ8 P;  3DS5 A;  3I55 P;  1E0H A;  5KP7 B;  1ZMB A;  1W2B O;  3G21 A;  3CMA P;  2PEO A;  1K8A Q;  2K93 A;  2VLQ A;  2QEX P;  3HYB A;  2KOQ A;  3GJN A;  2FVA A;  2AVA A;  4U0B A;  2LF4 A;  3B5I A;  1VQO P;  2KW2 A;  2XV6 A;  1FR2 A;  3CCQ P;  1Q7Y Q;  2K0X A;  2L0Q A;  2Z46 A;  1GPJ A;  3CXC O;  2K5X A;  4U0E A;  1E6J P;  2ONT A;  2OAR A;  2LKI A;  2N98 A;  3DTJ A;  4GR2 A;  2KGA A;  3GZL A;  1A43 A;  1KLP A;  3LRY A;  2EHT A;  4COC A;  1VQ4 P;  3G1I A;  2MD9 A;  4NEO A;  3G0V A;  1RO2 A;  2JO0 A;  3H47 A;  1DV5 A;  1Q81 Q;  3DS4 A;  2Z44 A;  2CNR A;  3RG2 A;  1N8R Q;  3EJB A;  3HZQ A;  3CCU P;  1YIJ P;  1EMV A;  2GDX A;  2MF4 A;  3CD6 P;  3GZM A;  1NQ4 A;  2LIW A;  2FQ0 A;  3DS0 A;  3G71 P;  4WYM A;  1YI2 P;  2AFD A;  1GXG A;  2M5R A;  2M8L A;  3M1M A;  2KOD A;  2FHS C;  4PH1 A;  4MRT C;  2WPT A;  4M0I A;  2FAC A;  2EG5 A;  2OTJ P;  1VQ6 P;  1X3O A;  2K94 A;  2VLP A;  1YJN P;  4XFZ A;  1K73 Q;  3G28 A;  2KGE A;  5CZD B;  1VQ7 P;  2CQ8 A;  3EJE A;  2GZJ A;  5HVC A;  3G6E P;  2KOO A;  2GZE A;  4IZ6 A;  1AYI A;  7CEI A;  3I56 P;  1JJ2 O;  2KGC A;  3G29 A;  2L6E A;  2DGY A;  2PEK A;  4H2X C;  4H2W C;  5JPA A;  3CCV P;  3P05 A;  1AF8 A;  1D1D A;  2JYG A;  2K0D X;  2QNW A;  2KWL A;  1UJZ A;  2PEQ A;  1UNK A;  2LIU A;  2N5H A;  1YJ9 P;  4PWV B;  5KP6 B;  2KOS A;  2MR7 A;  2FAD A;  4BPG A;  2KG9 A;  2OTL P;  2K2Q A;  1M74 A;  2PNG A;  3Q20 A;  2ERH A;  4HKG A;  4U0A A;  2NO8 A;  2CWO A;  2XZ0 D;  5F2K A;  2KG8 A;  2AF8 A;  1M90 Q;  3NTE A;  5F2O A;  3H0D A;  4QKO A;  2KOP A;  2PY8 A;  2CGQ A;  1NJI Q;  3G4S P;  1GXH A; 
#chains in the Genus database with same CATH homology
 4CA3 A;  2KR5 A;  2MVV A;  2K94 A;  2N6Y A;  2KG6 A;  2JQ4 A;  5KP7 B;  2L22 A;  4BPH A;  2GDY A;  2K93 A;  5HV8 A;  2N6Z A;  1T8K A;  2KGE A;  2KOQ A;  1L0H A;  2K0Y A;  2FVA A;  2AVA A;  5CZD B;  1OR5 A;  2KW2 A;  2CQ8 A;  3EJE A;  1L0I A;  5HVC A;  2K0X A;  2L0Q A;  2KOO A;  2FQ2 A;  4IZ6 A;  4BPF A;  2LKI A;  2N98 A;  4R0M A;  1HY8 A;  2KGA A;  3GZL A;  1KLP A;  2FQ1 A;  2KGC A;  2VSQ A;  2EHT A;  1VKU A;  2X2B A;  2EHS A;  3LMO A;  2LOL A;  4H2X C;  2MVU A;  2FVE A;  4H2W C;  3CE7 A;  2GDW A;  1AF8 A;  2DNW A;  2MD9 A;  4NEO A;  2CG5 B;  2QNW A;  3NY7 B;  1F80 D;  2KWL A;  2FVF A;  2LIU A;  2N5H A;  1DV5 A;  2KOR A;  2JU1 A;  5EJD A;  2K92 A;  2N5I A;  2CNR A;  2LML A;  3RG2 A;  3EJB A;  4PWV B;  2MY5 A;  2ROQ A;  2KGD A;  5KP6 B;  2FAE A;  2KOS A;  2XZ1 C;  2MR7 A;  4H2Y C;  2GDX A;  4PXH B;  2FAD A;  4BPG A;  2LPK A;  2LTE A;  2KG9 A;  2K2Q A;  2MF4 A;  2PNG A;  3GZM A;  4HKG A;  1NQ4 A;  3EJD A;  2LIW A;  2FQ0 A;  1DNY A;  2N50 A;  2L9F A;  4DG9 A;  2XZ0 D;  2AFD A;  2M5R A;  1ACP A;  2KG8 A;  2AF8 A;  2JGP A;  5KP8 B;  2FHS C;  2AFE A;  2JU2 A;  2L4B A;  4MRT C;  2FAC A;  1HQB A;  2KOP A;  2LL8 A;  2CGQ A;  2MR8 A;  1X3O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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