The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
178
|
sequence length |
485
|
structure length |
472
|
Chain Sequence |
LNYVAPKTRLEHEICAIFSSILNIETVGVEDNFFEIGGTSLIASKLIIELLKQGYSVRYDDIFRNKTPRALAKLLSGELTDDIIKNYNYGEINELLQENTWENFFDGENLELGNVLLTGATGFLGIHILYEFIKSEEGKIYCMLRKGKFDSCQERLIDVMNDYFDEDFTDLVGSRIIPIEGDITEIDDFKQLEDEPIDTVINSAALVKHYTADDYIFRVNVDGVINGLKFAQTRNNIKYVQISTISVLSSYSLNEEAYPNQEYDERTLYYEQDLENKYVCSKFLAERAVLQAATKGLPVKIIRVGNLMSRYSDGVFQKNYDTNAFLNNIKTIKKLGAMNPAMASEKVDMSQIDYVAKGILALSKTPEKSRVFHCMNNHYISHRDIVDALNTYGYGIEEVDFEEFKQIYEQNMNENIQGIITADFSIDDFFEENVEIEQTVDILHSLGFDWPEADEEYLKRLFDYLNKFDYFE
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Oxidoreductase
|
| molecule keywords |
Non-ribosomal peptide synthetase
|
| publication title |
Structure of a thiolation-reductase di-domain from an archaeal non-ribosomal peptide synthetase
rcsb |
| source organism |
Methanobrevibacter ruminantium (strain atcc 35063 / dsm 1093 / jcm 13430 / ocm 1
|
| total genus |
178
|
| structure length |
472
|
| sequence length |
485
|
| ec nomenclature | |
| pdb deposition date | 2020-02-12 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
