6ZM5Z

Human mitochondrial ribosome in complex with oxa1l, mrna, a/a trna, p/p trna and nascent polypeptide
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
122
structure length
122
Chain Sequence
KFTRSRIPEKVFQASPEDHEKYGGDPQNPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLIRIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKPVEQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Mechanism of membrane-tethered mitochondrial protein synthesis
doi rcsb
molecule tags Ribosome
molecule keywords 16S mitochondrial rRNA
total genus 19
structure length 122
sequence length 122
ec nomenclature
pdb deposition date 2020-07-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
Z PF00327 Ribosomal_L30 Ribosomal protein L30p/L7e
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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