Finding intermodel H-bonds Finding intramodel H-bonds Constraints relaxed by 0.4 angstroms and 20 degrees Models used: #0 1vax_A.cif H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): ASN 8.A ND2 GLY 6.A O no hydrogen 3.040 N/A GLN 9.A NE2 ASN 287.A O no hydrogen 3.272 N/A TYR 10.A N LEU 38.A O no hydrogen 3.348 N/A TYR 10.A OH VAL 55.A O no hydrogen 2.600 N/A LYS 12.A NZ THR 57.A OG1 no hydrogen 2.911 N/A GLU 14.A N THR 35.A OG1 no hydrogen 2.970 N/A VAL 15.A N VAL 34.A O no hydrogen 2.648 N/A ARG 16.A NH1 ASP 31.A OD1 no hydrogen 3.118 N/A ARG 16.A NH2 ASP 31.A OD1 no hydrogen 2.737 N/A ARG 16.A NH2 LEU 32.A O no hydrogen 2.765 N/A LEU 17.A N LEU 32.A O no hydrogen 2.813 N/A LYS 19.A N GLN 30.A O no hydrogen 2.747 N/A LYS 19.A NZ VAL 20.A O no hydrogen 2.946 N/A THR 21.A N GLU 28.A O no hydrogen 2.935 N/A THR 24.A OG1 ARG 26.A O no hydrogen 3.566 N/A ARG 26.A N THR 24.A OG1 no hydrogen 3.350 N/A ARG 26.A NH1 ASP 110.A O no hydrogen 2.884 N/A ARG 26.A NH1 ASP 112.A OD2 no hydrogen 2.809 N/A ARG 26.A NH2 ASP 110.A OD1 no hydrogen 2.713 N/A HIS 27.A N ASP 112.A O no hydrogen 2.982 N/A GLU 28.A N THR 21.A O no hydrogen 3.044 N/A GLN 30.A N LYS 19.A O no hydrogen 2.916 N/A LEU 32.A N LEU 17.A O no hydrogen 2.798 N/A ASN 33.A N GLN 101.A O no hydrogen 2.991 N/A VAL 34.A N VAL 15.A O no hydrogen 2.805 N/A THR 35.A N ALA 99.A O no hydrogen 2.869 N/A SER 36.A N LYS 12.A O no hydrogen 2.783 N/A SER 36.A OG GLN 60.A OE1 no hydrogen 2.766 N/A GLN 37.A N ARG 97.A O no hydrogen 3.057 N/A LEU 38.A N TYR 10.A O no hydrogen 2.738 N/A ARG 39.A N GLY 95.A O no hydrogen 2.944 N/A ARG 39.A NE GLN 9.A OE1 no hydrogen 2.786 N/A ARG 39.A NH2 GLN 9.A OE1 no hydrogen 2.748 N/A ARG 39.A NH2 GLU 128.A OE1 no hydrogen 3.297 N/A ASP 41.A N TRP 92.A O no hydrogen 2.959 N/A HIS 46.A N PHE 42.A O no hydrogen 3.287 N/A HIS 46.A ND1 PHE 42.A O no hydrogen 2.734 N/A THR 47.A N GLU 43.A O no hydrogen 2.946 N/A THR 47.A OG1 GLU 43.A O no hydrogen 3.174 N/A ALA 48.A N ALA 44.A O no hydrogen 2.749 N/A GLY 49.A N ALA 45.A O no hydrogen 3.187 N/A ASP 50.A N ALA 44.A O no hydrogen 3.287 N/A ALA 52.A N ASP 50.A OD1 no hydrogen 3.217 N/A VAL 54.A N ASN 51.A O no hydrogen 3.007 N/A GLN 60.A N ALA 56.A O no hydrogen 3.050 N/A GLN 60.A NE2 VAL 55.A O no hydrogen 3.337 N/A LYS 61.A N THR 57.A O no hydrogen 3.015 N/A LYS 61.A NZ ASP 58.A OD1 no hydrogen 3.202 N/A ASN 62.A N ASP 58.A O no hydrogen 2.979 N/A THR 63.A N THR 59.A O no hydrogen 2.936 N/A THR 63.A OG1 THR 59.A O no hydrogen 2.822 N/A VAL 64.A N GLN 60.A O no hydrogen 3.166 N/A TYR 65.A N LYS 61.A O no hydrogen 3.371 N/A TYR 65.A OH ARG 16.A O no hydrogen 2.750 N/A ALA 66.A N ASN 62.A O no hydrogen 2.927 N/A PHE 67.A N THR 63.A O no hydrogen 2.919 N/A ALA 68.A N VAL 64.A O no hydrogen 2.975 N/A ARG 69.A N TYR 65.A O no hydrogen 3.328 N/A ARG 69.A N ALA 66.A O no hydrogen 3.263 N/A ARG 69.A NH1 ARG 69.A O no hydrogen 2.968 N/A ASP 70.A N PHE 67.A O no hydrogen 3.191 N/A GLY 71.A N ALA 68.A O no hydrogen 2.841 N/A THR 74.A OG1 GLU 77.A OE2 no hydrogen 2.494 N/A THR 75.A OG1 GLN 102.A OE1 no hydrogen 2.652 N/A GLU 76.A N GLU 76.A OE1 no hydrogen 2.699 N/A GLU 77.A N THR 74.A OG1 no hydrogen 3.198 N/A PHE 78.A N THR 74.A O no hydrogen 3.038 N/A LEU 79.A N THR 75.A O no hydrogen 3.002 N/A LEU 80.A N GLU 76.A O no hydrogen 2.968 N/A ARG 81.A N GLU 77.A O no hydrogen 3.139 N/A ARG 81.A NH1 ASP 70.A OD2 no hydrogen 2.800 N/A ARG 81.A NH2 ASP 70.A OD2 no hydrogen 3.133 N/A LEU 82.A N PHE 78.A O no hydrogen 3.186 N/A GLY 83.A N LEU 79.A O no hydrogen 2.839 N/A LYS 84.A N LEU 80.A O no hydrogen 2.974 N/A HIS 85.A N ARG 81.A O no hydrogen 3.068 N/A PHE 86.A N LEU 82.A O no hydrogen 3.182 N/A THR 87.A N GLY 83.A O no hydrogen 3.155 N/A THR 87.A OG1 GLY 83.A O no hydrogen 3.032 N/A THR 87.A OG1 LYS 84.A O no hydrogen 3.213 N/A GLU 88.A N LYS 84.A O no hydrogen 2.886 N/A VAL 93.A N PHE 90.A O no hydrogen 3.053 N/A THR 94.A N ARG 39.A O no hydrogen 2.945 N/A GLY 95.A N ARG 39.A O no hydrogen 3.276 N/A GLY 96.A N ILE 129.A O no hydrogen 3.075 N/A ARG 97.A N GLN 37.A O no hydrogen 2.848 N/A ARG 97.A NH1 GLU 128.A OE1 no hydrogen 2.995 N/A ARG 97.A NH1 ILE 284.A O no hydrogen 3.183 N/A TRP 98.A N LEU 127.A O no hydrogen 2.806 N/A ALA 99.A N THR 35.A O no hydrogen 2.949 N/A ALA 100.A N ALA 125.A O no hydrogen 2.899 N/A GLN 101.A N ASN 33.A O no hydrogen 3.054 N/A GLN 102.A N ARG 123.A O no hydrogen 2.630 N/A PHE 103.A N ASP 31.A O no hydrogen 2.903 N/A TRP 105.A NE1 ASP 31.A OD2 no hydrogen 2.906 N/A ASP 106.A N SER 116.A O no hydrogen 2.803 N/A ARG 107.A NH1 HIS 27.A O no hydrogen 3.140 N/A ARG 107.A NH1 HIS 111.A O no hydrogen 3.031 N/A ARG 107.A NH1 ASP 112.A O no hydrogen 3.183 N/A ARG 107.A NH2 HIS 27.A O no hydrogen 2.887 N/A ILE 108.A N ALA 114.A O no hydrogen 3.041 N/A HIS 111.A N ILE 108.A O no hydrogen 2.776 N/A HIS 113.A N HIS 111.A ND1 no hydrogen 2.807 N/A SER 116.A N ASP 106.A O no hydrogen 2.777 N/A ASN 118.A N PHE 104.A O no hydrogen 2.871 N/A SER 120.A N ASN 118.A OD1 no hydrogen 3.199 N/A SER 120.A OG ASN 118.A OD1 no hydrogen 3.494 N/A VAL 122.A N GLU 141.A O no hydrogen 2.895 N/A ARG 123.A N GLN 102.A O no hydrogen 3.233 N/A ARG 123.A NH1 ASP 190.A OD1 no hydrogen 2.766 N/A ARG 123.A NH2 GLU 76.A OE1 no hydrogen 2.939 N/A ARG 123.A NH2 GLU 76.A OE2 no hydrogen 3.238 N/A ARG 123.A NH2 ASP 190.A OD1 no hydrogen 3.146 N/A THR 124.A N GLY 139.A O no hydrogen 2.956 N/A ALA 125.A N ALA 100.A O no hydrogen 2.948 N/A VAL 126.A N VAL 137.A O no hydrogen 2.863 N/A LEU 127.A N TRP 98.A O no hydrogen 2.650 N/A GLU 128.A N ALA 135.A O no hydrogen 2.894 N/A ILE 129.A N GLY 96.A O no hydrogen 3.062 N/A SER 130.A N GLU 133.A O no hydrogen 3.009 N/A GLY 131.A N THR 94.A O no hydrogen 3.108 N/A GLU 133.A N SER 130.A O no hydrogen 3.047 N/A ALA 135.A N GLU 128.A O no hydrogen 2.954 N/A VAL 137.A N VAL 126.A O no hydrogen 2.905 N/A ALA 138.A N TRP 180.A O no hydrogen 2.942 N/A GLY 139.A N THR 124.A O no hydrogen 2.994 N/A ILE 140.A N ALA 178.A O no hydrogen 2.899 N/A GLU 141.A N VAL 122.A O no hydrogen 2.928 N/A THR 144.A OG1 ASP 175.A OD1 no hydrogen 2.679 N/A VAL 145.A N THR 174.A O no hydrogen 2.828 N/A LYS 147.A N LEU 172.A O no hydrogen 2.952 N/A LYS 147.A NZ GLY 150.A O no hydrogen 3.183 N/A LYS 147.A NZ ALA 205.A O no hydrogen 3.166 N/A LYS 147.A NZ THR 207.A O no hydrogen 3.113 N/A THR 149.A OG1 ASP 169.A OD1 no hydrogen 2.850 N/A THR 149.A OG1 ASP 169.A OD2 no hydrogen 3.378 N/A GLU 152.A N SER 209.A O no hydrogen 2.777 N/A PHE 153.A N THR 167.A O no hydrogen 2.960 N/A HIS 154.A NE2 GLU 152.A OE1 no hydrogen 2.674 N/A GLY 155.A N GLU 166.A OE2 no hydrogen 2.715 N/A ARG 158.A NH1 LEU 164.A O no hydrogen 2.759 N/A ARG 158.A NH2 LEU 164.A O no hydrogen 2.721 N/A ASP 159.A N THR 162.A OG1 no hydrogen 3.038 N/A TYR 161.A N ASP 159.A OD1 no hydrogen 2.845 N/A THR 162.A N ASP 159.A O no hydrogen 3.116 N/A THR 162.A OG1 ASP 159.A OD1 no hydrogen 2.592 N/A GLN 165.A NE2 THR 163.A O no hydrogen 3.113 N/A THR 167.A N PHE 153.A O no hydrogen 3.160 N/A THR 167.A OG1 ASP 169.A O no hydrogen 3.171 N/A ASP 169.A N THR 167.A OG1 no hydrogen 3.305 N/A ARG 170.A N SER 151.A O no hydrogen 2.973 N/A ARG 170.A NE SER 151.A OG no hydrogen 3.201 N/A LEU 172.A N LYS 147.A O no hydrogen 3.160 N/A THR 174.A N VAL 145.A O no hydrogen 3.008 N/A THR 174.A OG1 PRO 238.A O no hydrogen 2.610 N/A VAL 176.A N LEU 143.A O no hydrogen 2.737 N/A ALA 178.A N ILE 140.A O no hydrogen 2.992 N/A ARG 179.A N LYS 234.A O no hydrogen 2.883 N/A ARG 179.A NH2 GLU 141.A OE2 no hydrogen 2.708 N/A TRP 180.A N ALA 138.A O no hydrogen 2.834 N/A TRP 180.A NE1 TYR 182.A OH no hydrogen 2.924 N/A ARG 181.A N GLU 232.A O no hydrogen 2.935 N/A ARG 181.A NE GLU 232.A OE1 no hydrogen 2.756 N/A ARG 181.A NH2 GLU 232.A OE1 no hydrogen 3.449 N/A TYR 182.A N ILE 136.A O no hydrogen 2.965 N/A ASN 183.A N GLU 229.A O no hydrogen 2.780 N/A GLU 186.A N THR 184.A OG1 no hydrogen 3.184 N/A ALA 191.A N ASP 188.A OD1 no hydrogen 3.155 N/A VAL 192.A N ASP 188.A O no hydrogen 2.946 N/A TYR 193.A N PHE 189.A O no hydrogen 2.978 N/A TYR 193.A OH GLU 121.A OE2 no hydrogen 2.512 N/A ALA 194.A N ASP 190.A O no hydrogen 3.091 N/A SER 195.A N ALA 191.A O no hydrogen 2.919 N/A VAL 196.A N VAL 192.A O no hydrogen 2.783 N/A ARG 197.A N TYR 193.A O no hydrogen 2.948 N/A ARG 197.A NE GLU 121.A OE1 no hydrogen 2.609 N/A GLY 198.A N ALA 194.A O no hydrogen 3.055 N/A LEU 199.A N SER 195.A O no hydrogen 2.905 N/A LEU 200.A N VAL 196.A O no hydrogen 2.954 N/A LEU 201.A N ARG 197.A O no hydrogen 3.120 N/A LYS 202.A N GLY 198.A O no hydrogen 2.934 N/A LYS 202.A NZ GLU 206.A OE1 no hydrogen 2.789 N/A LYS 202.A NZ GLU 206.A OE2 no hydrogen 3.520 N/A ALA 203.A N LEU 199.A O no hydrogen 2.951 N/A PHE 204.A N LEU 200.A O no hydrogen 2.971 N/A ALA 205.A N LEU 201.A O no hydrogen 3.022 N/A GLU 206.A N LYS 202.A O no hydrogen 2.856 N/A THR 207.A N ALA 203.A O no hydrogen 3.147 N/A THR 207.A OG1 ALA 203.A O no hydrogen 2.528 N/A HIS 208.A NE2 GLU 152.A OE2 no hydrogen 2.629 N/A SER 209.A N GLY 150.A O no hydrogen 3.323 N/A SER 209.A OG ALA 211.A O no hydrogen 2.935 N/A SER 209.A OG THR 215.A OG1 no hydrogen 2.753 N/A GLN 213.A N GLN 213.A OE1 no hydrogen 2.717 N/A GLN 214.A N ALA 211.A O no hydrogen 3.021 N/A GLN 214.A NE2 HIS 208.A O no hydrogen 3.542 N/A THR 215.A N ALA 211.A O no hydrogen 3.147 N/A THR 215.A OG1 SER 209.A OG no hydrogen 2.753 N/A MET 216.A N LEU 212.A O no hydrogen 2.891 N/A TYR 217.A N GLN 213.A O no hydrogen 2.969 N/A GLU 218.A N GLN 214.A O no hydrogen 2.989 N/A MET 219.A N THR 215.A O no hydrogen 3.058 N/A GLY 220.A N MET 216.A O no hydrogen 2.963 N/A ARG 221.A N TYR 217.A O no hydrogen 2.868 N/A ALA 222.A N GLU 218.A O no hydrogen 3.164 N/A ILE 224.A N GLY 220.A O no hydrogen 3.087 N/A GLU 225.A N ARG 221.A O no hydrogen 2.847 N/A THR 226.A N ALA 222.A O no hydrogen 3.195 N/A THR 226.A N VAL 223.A O no hydrogen 3.101 N/A THR 226.A OG1 ALA 222.A O no hydrogen 2.861 N/A HIS 227.A N VAL 223.A O no hydrogen 2.925 N/A ILE 230.A N HIS 227.A O no hydrogen 3.013 N/A ASP 231.A N ARG 181.A O no hydrogen 2.980 N/A ILE 233.A N ILE 273.A O no hydrogen 2.895 N/A LYS 234.A N ARG 179.A O no hydrogen 2.658 N/A MET 235.A N ALA 271.A O no hydrogen 2.956 N/A SER 236.A N SER 177.A O no hydrogen 3.073 N/A SER 236.A OG GLU 270.A OE1 no hydrogen 2.676 N/A LEU 237.A N ILE 269.A O no hydrogen 2.768 N/A ASN 239.A N GLY 267.A O no hydrogen 2.567 N/A LYS 240.A N ALA 173.A O no hydrogen 2.976 N/A LYS 240.A NZ ASP 175.A OD1 no hydrogen 2.673 N/A HIS 242.A ND1 LYS 240.A O no hydrogen 2.899 N/A PHE 243.A N TYR 260.A O no hydrogen 2.900 N/A VAL 245.A N VAL 258.A O no hydrogen 3.002 N/A GLN 248.A N ASP 246.A OD1 no hydrogen 3.131 N/A PHE 250.A N LEU 247.A O no hydrogen 2.783 N/A GLY 251.A N GLN 248.A O no hydrogen 2.804 N/A GLN 252.A N LEU 247.A O no hydrogen 3.249 N/A ASN 254.A ND2 VAL 245.A O no hydrogen 2.777 N/A ASN 254.A ND2 VAL 258.A O no hydrogen 2.881 N/A ASN 256.A N ASN 254.A O no hydrogen 2.748 N/A GLU 257.A N ASN 254.A OD1 no hydrogen 3.049 N/A VAL 258.A N ASN 254.A OD1 no hydrogen 2.911 N/A TYR 260.A N PHE 243.A O no hydrogen 2.844 N/A ALA 262.A N HIS 241.A O no hydrogen 3.096 N/A GLY 267.A N ASN 239.A O no hydrogen 3.337 N/A ILE 269.A N LEU 237.A O no hydrogen 2.849 N/A ALA 271.A N MET 235.A O no hydrogen 3.070 N/A ILE 273.A N ILE 233.A O no hydrogen 2.916 N/A ARG 275.A N ASP 231.A O no hydrogen 2.829 N/A ARG 275.A NE ILE 230.A O no hydrogen 3.264 N/A ARG 275.A NH2 ILE 224.A O no hydrogen 2.985 N/A ARG 275.A NH2 ILE 230.A O no hydrogen 3.043 N/A SER 278.A N ARG 275.A O no hydrogen 3.046 N/A SER 278.A OG ASP 231.A O no hydrogen 3.496 N/A SER 278.A OG ARG 275.A O no hydrogen 2.672 N/A TRP 285.A N HIS 282.A O no hydrogen 3.125 N/A TRP 285.A NE1 GLU 232.A OE1 no hydrogen 2.708 N/A SER 286.A N PRO 283.A O no hydrogen 2.960 N/A