Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 1ydp_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
SER 1.A OG     LEU 102.A O    no hydrogen  3.559  N/A
HIS 2.A N      LEU 102.A O    no hydrogen  3.341  N/A
HIS 2.A ND1    ASP 28.A OD1   no hydrogen  2.678  N/A
SER 3.A N      ASP 28.A OD2   no hydrogen  2.970  N/A
MET 4.A N      CYS 100.A O    no hydrogen  3.099  N/A
ARG 5.A N      TYR 26.A O     no hydrogen  2.709  N/A
ARG 5.A NH1    ASP 101.A OD1  no hydrogen  2.993  N/A
ARG 5.A NH1    TYR 112.A OH   no hydrogen  2.555  N/A
ARG 5.A NH2    ASP 101.A OD1  no hydrogen  3.194  N/A
ARG 5.A NH2    TYR 112.A OH   no hydrogen  2.701  N/A
TYR 6.A N      ILE 98.A O     no hydrogen  2.858  N/A
PHE 7.A N      MET 24.A O     no hydrogen  2.832  N/A
SER 8.A N      TRP 96.A O     no hydrogen  2.993  N/A
ALA 9.A N      ILE 22.A O     no hydrogen  2.933  N/A
ALA 10.A N     LEU 94.A O     no hydrogen  2.864  N/A
VAL 11.A N     ARG 20.A O     no hydrogen  2.865  N/A
SER 12.A N     HIS 92.A O     no hydrogen  3.061  N/A
SER 12.A OG    HIS 92.A O     no hydrogen  3.454  N/A
ARG 13.A NE    GLU 18.A O     no hydrogen  2.989  N/A
ARG 13.A NH1   ASP 38.A OD2   no hydrogen  3.038  N/A
ARG 13.A NH2   GLU 18.A O     no hydrogen  3.323  N/A
ARG 13.A NH2   ASP 38.A OD1   no hydrogen  2.737  N/A
ARG 13.A NH2   ASP 38.A OD2   no hydrogen  3.509  N/A
ARG 16.A N     ARG 13.A O     no hydrogen  2.788  N/A
ARG 20.A N     VAL 11.A O     no hydrogen  2.950  N/A
ARG 20.A NE    ASP 36.A OD1   no hydrogen  3.298  N/A
ARG 20.A NH2   ASP 36.A OD2   no hydrogen  2.779  N/A
PHE 21.A N     SER 37.A OG    no hydrogen  2.726  N/A
ILE 22.A N     ALA 9.A O      no hydrogen  2.984  N/A
ALA 23.A N     PHE 35.A O     no hydrogen  2.930  N/A
MET 24.A N     PHE 7.A O      no hydrogen  2.937  N/A
GLY 25.A N     VAL 33.A O     no hydrogen  2.995  N/A
TYR 26.A N     ARG 5.A O      no hydrogen  2.554  N/A
VAL 27.A N     THR 30.A O     no hydrogen  2.930  N/A
ASP 28.A N     SER 3.A O      no hydrogen  2.716  N/A
THR 30.A N     VAL 27.A O     no hydrogen  3.026  N/A
THR 30.A OG1   TYR 208.A OH   no hydrogen  2.824  N/A
PHE 32.A N     GLY 25.A O     no hydrogen  2.931  N/A
ARG 34.A N     GLU 45.A O     no hydrogen  2.842  N/A
PHE 35.A N     ALA 23.A O     no hydrogen  2.769  N/A
SER 37.A N     PHE 21.A O     no hydrogen  2.897  N/A
SER 37.A OG    PHE 21.A O     no hydrogen  3.409  N/A
ASP 38.A N     ASP 36.A OD1   no hydrogen  2.714  N/A
SER 39.A N     ASP 36.A O     no hydrogen  3.057  N/A
SER 39.A OG    ASP 36.A O     no hydrogen  3.029  N/A
MET 44.A N     THR 63.A OG1   no hydrogen  2.853  N/A
GLU 45.A N     ARG 34.A O     no hydrogen  2.807  N/A
ARG 47.A N     PHE 32.A O     no hydrogen  2.792  N/A
ARG 47.A NH1   GLU 45.A OE1   no hydrogen  3.464  N/A
ARG 47.A NH2   GLU 45.A OE1   no hydrogen  3.358  N/A
ARG 47.A NH2   PRO 46.A O     no hydrogen  3.039  N/A
VAL 51.A N     ALA 48.A O     no hydrogen  3.425  N/A
GLU 52.A N     PRO 49.A O     no hydrogen  3.032  N/A
GLN 53.A NE2   TRP 50.A O     no hydrogen  3.421  N/A
GLU 54.A N     VAL 51.A O     no hydrogen  3.163  N/A
TYR 58.A N     GLY 55.A O     no hydrogen  3.205  N/A
TYR 58.A OH    TYR 170.A OH   no hydrogen  2.675  N/A
TRP 59.A N     GLY 55.A O     no hydrogen  3.493  N/A
TRP 59.A NE1   GLU 54.A O     no hydrogen  3.074  N/A
GLU 60.A N     PRO 56.A O     no hydrogen  2.869  N/A
GLU 61.A N     GLU 57.A O     no hydrogen  2.945  N/A
GLU 62.A N     TYR 58.A O     no hydrogen  2.773  N/A
THR 63.A N     TRP 59.A O     no hydrogen  2.888  N/A
THR 63.A OG1   TRP 59.A O     no hydrogen  3.096  N/A
ARG 64.A N     GLU 60.A O     no hydrogen  3.098  N/A
ASN 65.A N     GLU 61.A O     no hydrogen  3.061  N/A
THR 66.A N     GLU 62.A O     no hydrogen  2.913  N/A
THR 66.A OG1   GLU 62.A O     no hydrogen  2.751  N/A
LYS 67.A N     THR 63.A O     no hydrogen  2.927  N/A
ALA 68.A N     ARG 64.A O     no hydrogen  3.161  N/A
HIS 69.A N     ASN 65.A O     no hydrogen  2.886  N/A
ALA 70.A N     THR 66.A O     no hydrogen  3.013  N/A
GLN 71.A N     LYS 67.A O     no hydrogen  3.207  N/A
THR 72.A N     ALA 68.A O     no hydrogen  2.977  N/A
THR 72.A OG1   ALA 68.A O     no hydrogen  3.157  N/A
ASP 73.A N     HIS 69.A O     no hydrogen  2.788  N/A
ARG 74.A N     ALA 70.A O     no hydrogen  2.925  N/A
ARG 74.A NE    PRO 19.A O     no hydrogen  2.975  N/A
ARG 74.A NH1   GLN 71.A OE1   no hydrogen  2.600  N/A
ARG 74.A NH2   PRO 19.A O     no hydrogen  3.274  N/A
MET 75.A N     GLN 71.A O     no hydrogen  3.158  N/A
ASN 76.A N     THR 72.A O     no hydrogen  2.863  N/A
ASN 76.A ND2   ASP 73.A OD1   no hydrogen  3.064  N/A
LEU 77.A N     ASP 73.A O     no hydrogen  2.864  N/A
GLN 78.A N     ARG 74.A O     no hydrogen  3.232  N/A
GLN 78.A N     MET 75.A O     no hydrogen  2.844  N/A
THR 79.A N     MET 75.A O     no hydrogen  2.712  N/A
THR 79.A OG1   MET 75.A O     no hydrogen  3.075  N/A
LEU 80.A N     ASN 76.A O     no hydrogen  2.867  N/A
ARG 81.A N     LEU 77.A O     no hydrogen  3.254  N/A
ARG 81.A NH1   GLN 86.A O     no hydrogen  3.452  N/A
GLY 82.A N     GLN 78.A O     no hydrogen  3.302  N/A
TYR 83.A N     THR 79.A O     no hydrogen  2.930  N/A
TYR 84.A N     LEU 80.A O     no hydrogen  2.959  N/A
TYR 84.A OH    ASP 136.A OD1  no hydrogen  2.733  N/A
TYR 84.A OH    ASP 136.A OD2  no hydrogen  3.235  N/A
ASN 85.A N     GLY 82.A O     no hydrogen  2.905  N/A
GLN 86.A N     ARG 81.A O     no hydrogen  2.863  N/A
GLN 86.A NE2   TYR 117.A OH   no hydrogen  2.440  N/A
ALA 89.A N     SER 87.A OG    no hydrogen  2.950  N/A
SER 90.A N     SER 87.A O     no hydrogen  3.250  N/A
SER 90.A OG    SER 87.A O     no hydrogen  2.646  N/A
SER 90.A OG    HIS 92.A NE2   no hydrogen  2.794  N/A
SER 91.A OG    SER 12.A O     no hydrogen  3.218  N/A
HIS 92.A N     SER 12.A OG    no hydrogen  2.823  N/A
HIS 92.A ND1   ASP 118.A OD2  no hydrogen  2.718  N/A
HIS 92.A NE2   SER 90.A OG    no hydrogen  2.794  N/A
THR 93.A N     ASP 118.A OD1  no hydrogen  2.895  N/A
LEU 94.A N     ALA 10.A O     no hydrogen  2.904  N/A
GLN 95.A N     ALA 116.A O    no hydrogen  2.797  N/A
TRP 96.A N     SER 8.A O      no hydrogen  2.949  N/A
TRP 96.A NE1   GLU 113.A OE2  no hydrogen  2.927  N/A
MET 97.A N     ARG 114.A O    no hydrogen  3.022  N/A
ILE 98.A N     TYR 6.A O      no hydrogen  2.982  N/A
CYS 100.A N    MET 4.A O      no hydrogen  3.046  N/A
ASP 101.A N    ARG 110.A O    no hydrogen  2.777  N/A
LEU 102.A N    HIS 2.A O      no hydrogen  2.766  N/A
GLY 103.A N    ARG 107.A O    no hydrogen  3.054  N/A
GLY 106.A N    GLY 103.A O    no hydrogen  3.270  N/A
ARG 107.A N    ASP 105.A OD1  no hydrogen  3.259  N/A
ARG 107.A NH2  ASP 105.A O    no hydrogen  2.814  N/A
ILE 109.A N    ASP 101.A O    no hydrogen  2.943  N/A
ARG 110.A NE   ASP 101.A OD2  no hydrogen  1.979  N/A
TYR 112.A N    GLY 99.A O     no hydrogen  2.998  N/A
TYR 112.A OH   ASP 101.A OD1  no hydrogen  2.340  N/A
ARG 114.A N    MET 97.A O     no hydrogen  2.835  N/A
TYR 115.A N    LEU 123.A O    no hydrogen  2.666  N/A
TYR 115.A OH   GLU 113.A OE2  no hydrogen  2.597  N/A
ALA 116.A N    GLN 95.A O     no hydrogen  2.903  N/A
TYR 117.A N    LYS 120.A O    no hydrogen  2.822  N/A
ASP 118.A N    THR 93.A O     no hydrogen  2.687  N/A
LYS 120.A N    TYR 117.A O    no hydrogen  3.036  N/A
TYR 122.A N    TYR 115.A O    no hydrogen  2.795  N/A
TYR 122.A OH   SER 142.A OG   no hydrogen  2.712  N/A
LEU 123.A N    TYR 115.A O    no hydrogen  3.329  N/A
ALA 124.A N    THR 133.A O    no hydrogen  3.056  N/A
LEU 125.A N    GLU 113.A O    no hydrogen  2.827  N/A
ASN 126.A N    SER 131.A O    no hydrogen  2.873  N/A
ASN 126.A ND2  THR 133.A OG1  no hydrogen  2.567  N/A
LEU 129.A N    ASN 126.A O    no hydrogen  2.705  N/A
ARG 130.A N    ASP 128.A OD1  no hydrogen  3.365  N/A
ARG 130.A NH1  ASP 128.A O    no hydrogen  3.003  N/A
SER 131.A OG   ASN 126.A OD1  no hydrogen  2.793  N/A
SER 131.A OG   ASP 128.A OD1  no hydrogen  2.812  N/A
SER 131.A OG   ASP 128.A OD2  no hydrogen  3.271  N/A
THR 133.A N    ALA 124.A O    no hydrogen  2.861  N/A
ALA 135.A N    TYR 122.A O    no hydrogen  2.864  N/A
ALA 139.A N    ASP 136.A OD2  no hydrogen  2.856  N/A
GLN 140.A N    ASP 136.A O    no hydrogen  3.104  N/A
GLN 140.A NE2  ASP 136.A O    no hydrogen  3.614  N/A
ILE 141.A N    ALA 138.A O    no hydrogen  2.770  N/A
SER 142.A OG   TYR 122.A OH   no hydrogen  2.712  N/A
LYS 143.A N    ALA 139.A O    no hydrogen  2.734  N/A
LYS 143.A NZ   TRP 132.A O    no hydrogen  3.312  N/A
ARG 144.A N    GLN 140.A O    no hydrogen  2.887  N/A
LYS 145.A N    ILE 141.A O    no hydrogen  2.951  N/A
CYS 146.A N    SER 142.A O    no hydrogen  2.851  N/A
CYS 146.A SG   SER 142.A O    no hydrogen  3.404  N/A
GLU 147.A N    LYS 143.A O    no hydrogen  2.916  N/A
ALA 148.A N    ARG 144.A O    no hydrogen  2.956  N/A
ALA 149.A N    LYS 145.A O    no hydrogen  3.213  N/A
ALA 149.A N    CYS 146.A O    no hydrogen  3.198  N/A
ASN 150.A N    GLU 147.A O    no hydrogen  3.154  N/A
VAL 151.A N    CYS 146.A O    no hydrogen  3.281  N/A
GLU 153.A N    ASN 150.A O    no hydrogen  3.306  N/A
GLN 154.A N    VAL 151.A O    no hydrogen  2.836  N/A
ARG 155.A N    VAL 151.A O    no hydrogen  3.155  N/A
ARG 155.A NE   GLU 113.A OE1  no hydrogen  2.768  N/A
ARG 155.A NE   GLU 113.A OE2  no hydrogen  3.262  N/A
ARG 155.A NH2  GLU 113.A OE2  no hydrogen  2.682  N/A
ARG 156.A N    ALA 152.A O    no hydrogen  2.830  N/A
ARG 156.A NH1  LEU 129.A O    no hydrogen  2.768  N/A
ALA 157.A N    GLU 153.A O    no hydrogen  3.088  N/A
TYR 158.A N    GLN 154.A O    no hydrogen  3.271  N/A
LEU 159.A N    ARG 155.A O    no hydrogen  2.989  N/A
GLU 160.A N    ARG 156.A O    no hydrogen  2.833  N/A
GLY 161.A N    ALA 157.A O    no hydrogen  2.898  N/A
CYS 163.A N    TYR 158.A O    no hydrogen  2.748  N/A
GLU 165.A N    GLY 161.A O    no hydrogen  2.938  N/A
TRP 166.A N    THR 162.A O    no hydrogen  2.896  N/A
LEU 167.A N    CYS 163.A O    no hydrogen  2.972  N/A
HIS 168.A N    VAL 164.A O    no hydrogen  3.006  N/A
HIS 168.A NE2  GLY 106.A O    no hydrogen  2.772  N/A
ARG 169.A N    GLU 165.A O    no hydrogen  3.096  N/A
ARG 169.A NE   GLU 54.A OE2   no hydrogen  3.129  N/A
ARG 169.A NH2  GLU 54.A OE2   no hydrogen  3.402  N/A
TYR 170.A N    TRP 166.A O    no hydrogen  2.846  N/A
TYR 170.A OH   TYR 58.A OH    no hydrogen  2.675  N/A
LEU 171.A N    LEU 167.A O    no hydrogen  2.869  N/A
GLU 172.A N    HIS 168.A O    no hydrogen  3.202  N/A
ASN 173.A N    ARG 169.A O    no hydrogen  2.926  N/A
GLY 174.A N    TYR 170.A O    no hydrogen  2.808  N/A
LYS 175.A N    GLU 172.A O    no hydrogen  3.237  N/A
MET 177.A N    GLY 174.A O    no hydrogen  2.926  N/A
LEU 178.A N    GLY 174.A O    no hydrogen  2.687  N/A
GLN 179.A N    LYS 175.A O    no hydrogen  3.176  N/A
LYS 185.A N    LEU 205.A O    no hydrogen  2.705  N/A
HIS 187.A N    TRP 203.A O    no hydrogen  3.432  N/A
THR 189.A N    ARG 201.A O    no hydrogen  2.833  N/A
THR 189.A OG1  HIS 191.A NE2  no hydrogen  2.738  N/A
HIS 191.A N    THR 199.A O    no hydrogen  2.946  N/A
HIS 191.A NE2  THR 189.A OG1  no hydrogen  2.738  N/A
ALA 198.A N    VAL 248.A O    no hydrogen  2.892  N/A
THR 199.A N    HIS 191.A O    no hydrogen  2.921  N/A
LEU 200.A N    VAL 246.A O    no hydrogen  2.851  N/A
ARG 201.A N    THR 189.A O    no hydrogen  3.396  N/A
CYS 202.A N    ALA 244.A O    no hydrogen  2.779  N/A
TRP 203.A N    HIS 187.A O    no hydrogen  2.886  N/A
ALA 204.A N    LYS 242.A O    no hydrogen  2.935  N/A
LEU 205.A N    LYS 185.A O    no hydrogen  2.892  N/A
PHE 207.A N    PHE 240.A O    no hydrogen  3.291  N/A
TYR 208.A N    ASP 182.A O    no hydrogen  3.449  N/A
TYR 208.A OH   THR 30.A OG1   no hydrogen  2.824  N/A
ALA 210.A N    ASP 29.A OD2   no hydrogen  3.412  N/A
ILE 213.A N    GLN 261.A O    no hydrogen  3.191  N/A
THR 215.A N    HIS 259.A O    no hydrogen  3.005  N/A
THR 215.A OG1  HIS 259.A O    no hydrogen  3.442  N/A
TRP 216.A NE1  ALA 244.A O    no hydrogen  2.928  N/A
GLN 217.A N    THR 257.A O    no hydrogen  2.422  N/A
ARG 218.A N    GLU 221.A O    no hydrogen  2.941  N/A
ARG 218.A NH2  GLU 252.A OE1  no hydrogen  2.839  N/A
ARG 218.A NH2  TYR 256.A OH   no hydrogen  2.923  N/A
ASP 219.A N    ARG 255.A O    no hydrogen  2.635  N/A
GLN 223.A N    TRP 216.A O    no hydrogen  3.091  N/A
GLN 223.A NE2  GLU 221.A O    no hydrogen  2.904  N/A
GLN 223.A NE2  GLU 221.A OE1  no hydrogen  3.469  N/A
ASP 226.A N    GLN 223.A O    no hydrogen  2.815  N/A
VAL 227.A N    THR 224.A O    no hydrogen  3.274  N/A
GLU 228.A N    ALA 245.A O    no hydrogen  3.034  N/A
VAL 230.A N    TRP 243.A O    no hydrogen  3.366  N/A
ARG 233.A N    GLN 241.A O    no hydrogen  3.007  N/A
ARG 233.A NE   GLN 241.A OE1  no hydrogen  3.218  N/A
ALA 235.A N    THR 239.A O    no hydrogen  2.786  N/A
THR 239.A N    ASP 237.A OD1  no hydrogen  3.085  N/A
THR 239.A OG1  ASP 237.A OD1  no hydrogen  2.625  N/A
PHE 240.A N    PHE 207.A O    no hydrogen  2.767  N/A
GLN 241.A N    ARG 233.A O    no hydrogen  2.827  N/A
LYS 242.A N    ALA 204.A O    no hydrogen  3.080  N/A
LYS 242.A NZ   VAL 230.A O    no hydrogen  2.798  N/A
LYS 242.A NZ   THR 232.A OG1  no hydrogen  3.131  N/A
ALA 244.A N    CYS 202.A O    no hydrogen  2.971  N/A
ALA 245.A N    GLU 228.A O    no hydrogen  2.973  N/A
VAL 246.A N    LEU 200.A O    no hydrogen  2.913  N/A
VAL 248.A N    ALA 198.A O    no hydrogen  2.796  N/A
SER 250.A N    TYR 196.A O    no hydrogen  2.588  N/A
GLY 251.A N    GLU 253.A OE2  no hydrogen  2.710  N/A
GLU 252.A N    PRO 249.A O    no hydrogen  3.086  N/A
ARG 255.A N    GLU 252.A O    no hydrogen  3.022  N/A
ARG 255.A NH1  ASP 219.A OD2  no hydrogen  3.357  N/A
TYR 256.A N    GLU 253.A O    no hydrogen  2.925  N/A
THR 257.A N    GLN 217.A O    no hydrogen  2.360  N/A
THR 257.A OG1  GLN 217.A O    no hydrogen  3.507  N/A
CYS 258.A N    LEU 271.A O    no hydrogen  2.827  N/A
CYS 258.A SG   THR 215.A O    no hydrogen  3.908  N/A
HIS 259.A N    THR 215.A O    no hydrogen  2.596  N/A
VAL 260.A N    LEU 269.A O    no hydrogen  3.169  N/A
GLN 261.A N    ILE 213.A O    no hydrogen  2.989  N/A
HIS 262.A ND1  GLU 211.A O    no hydrogen  2.954  N/A
HIS 262.A NE2  TYR 208.A O    no hydrogen  3.099  N/A
LEU 265.A N    HIS 262.A O    no hydrogen  2.796  N/A
LEU 269.A N    VAL 260.A O    no hydrogen  3.314  N/A
LEU 271.A N    CYS 258.A O    no hydrogen  2.936  N/A
ARG 272.A NE   GLN 254.A O    no hydrogen  2.797  N/A
ARG 272.A NH2  GLN 254.A O    no hydrogen  3.529  N/A