Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 1yms_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
GLN 6.A N      SER 3.A OG     no hydrogen  3.044  N/A
GLN 6.A NE2    GLN 1.A O      no hydrogen  3.270  N/A
GLN 7.A N      SER 3.A O      no hydrogen  2.885  N/A
LYS 8.A N      ALA 4.A O      no hydrogen  2.947  N/A
LEU 9.A N      VAL 5.A O      no hydrogen  2.931  N/A
ALA 10.A N     GLN 6.A O      no hydrogen  2.959  N/A
ALA 11.A N     GLN 7.A O      no hydrogen  3.032  N/A
LEU 12.A N     LYS 8.A O      no hydrogen  2.948  N/A
GLU 13.A N     LEU 9.A O      no hydrogen  2.877  N/A
LYS 14.A N     ALA 10.A O     no hydrogen  2.870  N/A
SER 15.A N     ALA 11.A O     no hydrogen  3.099  N/A
SER 15.A OG    ALA 11.A O     no hydrogen  3.148  N/A
SER 16.A N     LEU 12.A O     no hydrogen  3.023  N/A
SER 16.A N     GLU 13.A O     no hydrogen  3.042  N/A
SER 16.A OG    GLU 13.A O     no hydrogen  2.688  N/A
GLY 17.A N     GLU 13.A O     no hydrogen  3.175  N/A
GLY 18.A N     SER 16.A OG    no hydrogen  3.095  N/A
ARG 19.A N     THR 239.A O    no hydrogen  2.838  N/A
ARG 19.A NH1   GLU 39.A OE1   no hydrogen  3.044  N/A
ARG 19.A NH1   ARG 40.A O     no hydrogen  3.073  N/A
ARG 19.A NH2   ARG 40.A O     no hydrogen  2.986  N/A
LEU 20.A N     GLU 13.A OE2   no hydrogen  2.865  N/A
GLY 21.A N     TYR 237.A O    no hydrogen  2.794  N/A
VAL 22.A N     TYR 35.A O     no hydrogen  2.808  N/A
ALA 23.A N     VAL 235.A O    no hydrogen  3.067  N/A
LEU 24.A N     VAL 33.A O     no hydrogen  2.846  N/A
ILE 25.A N     VAL 233.A O    no hydrogen  2.901  N/A
ASP 26.A N     THR 31.A O     no hydrogen  2.935  N/A
THR 27.A N     PRO 231.A O    no hydrogen  3.053  N/A
THR 27.A OG1   PRO 231.A O    no hydrogen  2.647  N/A
ALA 28.A N     ASP 26.A OD1   no hydrogen  2.884  N/A
ASP 29.A N     ASP 26.A O     no hydrogen  3.303  N/A
ASN 30.A N     ASP 26.A O     no hydrogen  2.735  N/A
THR 31.A N     ASP 29.A OD1   no hydrogen  3.007  N/A
THR 31.A OG1   ASP 29.A OD1   no hydrogen  2.617  N/A
THR 31.A OG1   ASP 29.A OD2   no hydrogen  3.450  N/A
VAL 33.A N     LEU 24.A O     no hydrogen  3.095  N/A
TYR 35.A N     VAL 22.A O     no hydrogen  2.843  N/A
TYR 35.A OH    GLU 13.A OE1   no hydrogen  2.626  N/A
ARG 36.A NE    GLU 13.A OE1   no hydrogen  3.440  N/A
ARG 36.A NE    GLU 13.A OE2   no hydrogen  2.780  N/A
ARG 36.A NH1   GLU 39.A OE2   no hydrogen  2.854  N/A
ARG 36.A NH2   GLU 13.A OE1   no hydrogen  2.898  N/A
GLU 39.A N     ARG 36.A O     no hydrogen  3.206  N/A
ARG 40.A NH1   THR 134.A O    no hydrogen  3.000  N/A
ARG 40.A NH1   THR 155.A OG1  no hydrogen  2.990  N/A
ARG 40.A NH2   THR 134.A O    no hydrogen  2.910  N/A
PHE 41.A N     THR 156.A O    no hydrogen  2.924  N/A
MET 43.A N     ASP 154.A O    no hydrogen  3.046  N/A
SER 45.A OG    SER 105.A OG   no hydrogen  3.078  N/A
THR 46.A N     MET 43.A O     no hydrogen  3.142  N/A
THR 46.A OG1   MET 43.A O     no hydrogen  2.787  N/A
THR 46.A OG1   TYR 237.A OH   no hydrogen  2.713  N/A
SER 47.A N     CYS 44.A O     no hydrogen  3.116  N/A
SER 47.A OG    CYS 44.A O     no hydrogen  2.786  N/A
LYS 48.A N     SER 45.A O     no hydrogen  3.024  N/A
LYS 48.A NZ    SER 45.A OG    no hydrogen  3.086  N/A
LYS 48.A NZ    SER 105.A OG   no hydrogen  2.940  N/A
LYS 48.A NZ    ASP 106.A O    no hydrogen  3.503  N/A
LYS 48.A NZ    ASN 107.A OD1  no hydrogen  2.754  N/A
VAL 49.A N     THR 46.A O     no hydrogen  3.297  N/A
ALA 51.A N     SER 47.A O     no hydrogen  3.305  N/A
ALA 52.A N     LYS 48.A O     no hydrogen  2.877  N/A
ALA 53.A N     VAL 49.A O     no hydrogen  2.884  N/A
ALA 54.A N     MET 50.A O     no hydrogen  2.950  N/A
VAL 55.A N     ALA 51.A O     no hydrogen  3.224  N/A
LEU 56.A N     ALA 52.A O     no hydrogen  2.950  N/A
LYS 57.A N     ALA 53.A O     no hydrogen  2.869  N/A
LYS 57.A NZ    GLU 60.A OE1   no hydrogen  2.972  N/A
LYS 57.A NZ    GLU 60.A OE2   no hydrogen  3.257  N/A
LYS 57.A NZ    ALA 173.A O    no hydrogen  2.969  N/A
GLN 58.A N     ALA 54.A O     no hydrogen  3.088  N/A
SER 59.A N     VAL 55.A O     no hydrogen  2.947  N/A
SER 59.A OG    LEU 56.A O     no hydrogen  2.571  N/A
GLU 60.A N     LYS 57.A O     no hydrogen  3.064  N/A
THR 61.A N     GLN 58.A O     no hydrogen  3.201  N/A
THR 61.A OG1   GLN 58.A O     no hydrogen  3.383  N/A
GLN 62.A N     SER 59.A O     no hydrogen  3.252  N/A
LEU 65.A N     GLN 62.A O     no hydrogen  2.997  N/A
ASN 67.A N     GLN 64.A O     no hydrogen  3.014  N/A
ASN 67.A ND2   GLN 64.A OE1   no hydrogen  3.270  N/A
GLN 68.A N     LEU 65.A O     no hydrogen  2.909  N/A
VAL 70.A N     MET 92.A O     no hydrogen  2.723  N/A
ILE 72.A N     GLY 90.A O     no hydrogen  3.037  N/A
LYS 73.A N     ASP 76.A OD2   no hydrogen  2.714  N/A
ASP 76.A N     LYS 73.A O     no hydrogen  2.790  N/A
LEU 77.A N     PRO 74.A O     no hydrogen  3.269  N/A
VAL 78.A N     ASN 81.A OD1   no hydrogen  2.799  N/A
ASN 81.A ND2   VAL 78.A O     no hydrogen  3.575  N/A
ILE 83.A N     ASP 106.A OD2  no hydrogen  2.921  N/A
ALA 84.A N     ASP 106.A OD2  no hydrogen  2.867  N/A
GLU 85.A N     ASN 81.A O     no hydrogen  3.154  N/A
LYS 86.A N     ILE 83.A O     no hydrogen  3.073  N/A
HIS 87.A N     ALA 84.A O     no hydrogen  2.877  N/A
ASN 89.A N     ILE 72.A O     no hydrogen  2.713  N/A
GLY 90.A N     HIS 87.A O     no hydrogen  2.786  N/A
MET 92.A N     VAL 70.A O     no hydrogen  2.923  N/A
THR 93.A N     GLU 96.A OE2   no hydrogen  2.968  N/A
THR 93.A OG1   LEU 66.A O     no hydrogen  3.516  N/A
LEU 94.A N     GLN 68.A O     no hydrogen  3.136  N/A
ALA 95.A N     LEU 66.A O     no hydrogen  2.962  N/A
GLU 96.A N     THR 93.A OG1   no hydrogen  3.075  N/A
LEU 97.A N     THR 93.A O     no hydrogen  2.859  N/A
SER 98.A N     LEU 94.A O     no hydrogen  2.907  N/A
SER 98.A OG    LEU 94.A O     no hydrogen  2.819  N/A
ALA 99.A N     ALA 95.A O     no hydrogen  2.894  N/A
ALA 100.A N    GLU 96.A O     no hydrogen  2.945  N/A
ALA 101.A N    LEU 97.A O     no hydrogen  2.899  N/A
LEU 102.A N    SER 98.A O     no hydrogen  2.940  N/A
GLN 103.A N    ALA 99.A O     no hydrogen  2.853  N/A
GLN 103.A NE2  TRP 185.A O    no hydrogen  2.875  N/A
TYR 104.A N    ALA 100.A O    no hydrogen  3.131  N/A
ASP 106.A N    ALA 100.A O    no hydrogen  3.139  N/A
ASN 107.A N    TYR 80.A O     no hydrogen  2.866  N/A
ASN 107.A ND2  ASN 79.A OD1   no hydrogen  2.847  N/A
THR 108.A OG1  ASP 76.A O     no hydrogen  3.144  N/A
THR 108.A OG1  ASN 81.A OD1   no hydrogen  2.970  N/A
ALA 109.A N    ASP 106.A OD1  no hydrogen  2.832  N/A
MET 110.A N    ASP 106.A O    no hydrogen  3.268  N/A
ASN 111.A N    ASN 107.A O    no hydrogen  2.985  N/A
ASN 111.A ND2  GLU 141.A O    no hydrogen  2.998  N/A
LYS 112.A N    THR 108.A O    no hydrogen  3.089  N/A
LYS 112.A NZ   GLU 71.A O     no hydrogen  3.246  N/A
LYS 112.A NZ   ASP 76.A OD2   no hydrogen  2.869  N/A
LEU 113.A N    ALA 109.A O    no hydrogen  3.062  N/A
ILE 114.A N    MET 110.A O    no hydrogen  2.875  N/A
ALA 115.A N    ASN 111.A O    no hydrogen  2.934  N/A
GLN 116.A N    LYS 112.A O    no hydrogen  2.982  N/A
LEU 117.A N    LEU 113.A O    no hydrogen  3.178  N/A
LEU 117.A N    ILE 114.A O    no hydrogen  3.035  N/A
GLY 118.A N    ALA 115.A O    no hydrogen  2.988  N/A
GLY 119.A N    ILE 114.A O    no hydrogen  2.910  N/A
GLY 122.A N    GLY 119.A O    no hydrogen  2.849  N/A
VAL 123.A N    PRO 120.A O    no hydrogen  2.905  N/A
THR 124.A N    PRO 120.A O    no hydrogen  3.236  N/A
THR 124.A OG1  LEU 137.A O    no hydrogen  3.225  N/A
ALA 125.A N    GLY 121.A O    no hydrogen  2.864  N/A
PHE 126.A N    GLY 122.A O    no hydrogen  3.212  N/A
ALA 127.A N    VAL 123.A O    no hydrogen  3.029  N/A
ARG 128.A N    THR 124.A O    no hydrogen  2.914  N/A
ARG 128.A NH1  ASP 132.A O    no hydrogen  2.872  N/A
ARG 128.A NH1  PHE 135.A O    no hydrogen  2.780  N/A
ARG 128.A NH2  PHE 135.A O    no hydrogen  3.053  N/A
ALA 129.A N    ALA 125.A O    no hydrogen  3.001  N/A
ILE 130.A N    PHE 126.A O    no hydrogen  3.097  N/A
ILE 130.A N    ALA 127.A O    no hydrogen  3.164  N/A
GLY 131.A N    ARG 128.A O    no hydrogen  3.087  N/A
ASP 132.A N    ALA 127.A O    no hydrogen  2.895  N/A
THR 134.A N    ASP 132.A OD1  no hydrogen  2.909  N/A
PHE 135.A N    ASP 132.A OD1  no hydrogen  2.851  N/A
ARG 136.A N    THR 155.A O    no hydrogen  3.178  N/A
ARG 136.A NE   ASP 138.A OD2  no hydrogen  2.912  N/A
ARG 136.A NH2  ASP 138.A OD1  no hydrogen  3.016  N/A
LEU 137.A N    THR 124.A OG1  no hydrogen  3.004  N/A
ASP 138.A N    ASP 154.A OD1  no hydrogen  2.684  N/A
ARG 139.A N    ASP 154.A OD1  no hydrogen  3.059  N/A
ARG 139.A NE   ASP 154.A OD2  no hydrogen  2.779  N/A
ARG 139.A NH1  THR 146.A OG1  no hydrogen  2.962  N/A
ARG 139.A NH2  THR 146.A OG1  no hydrogen  3.095  N/A
ARG 139.A NH2  ASP 154.A OD2  no hydrogen  2.881  N/A
GLU 141.A N    ASN 111.A OD1  no hydrogen  2.774  N/A
THR 143.A OG1  THR 140.A O    no hydrogen  3.494  N/A
LEU 144.A N    THR 140.A O    no hydrogen  2.978  N/A
ASN 145.A N    PRO 142.A O    no hydrogen  3.126  N/A
ASN 145.A ND2  GLU 141.A OE2  no hydrogen  2.751  N/A
ASN 145.A ND2  PRO 142.A O    no hydrogen  3.008  N/A
THR 146.A N    THR 143.A O    no hydrogen  3.150  N/A
THR 146.A OG1  THR 143.A O    no hydrogen  3.312  N/A
ASP 151.A N    ILE 148.A O    no hydrogen  3.048  N/A
ARG 153.A N    ASP 151.A OD1  no hydrogen  3.069  N/A
ARG 153.A NE   ASP 151.A OD1  no hydrogen  3.078  N/A
ARG 153.A NE   ASP 151.A OD2  no hydrogen  3.097  N/A
ARG 153.A NH2  ASP 151.A OD2  no hydrogen  2.712  N/A
ASP 154.A N    ASP 138.A OD2  no hydrogen  2.896  N/A
THR 155.A OG1  PRO 152.A O    no hydrogen  2.658  N/A
THR 156.A N    PHE 41.A O     no hydrogen  3.196  N/A
ARG 159.A N    GLY 37.A O     no hydrogen  3.029  N/A
ARG 159.A NE   ASP 38.A OD1   no hydrogen  2.716  N/A
ARG 159.A NE   ASP 38.A OD2   no hydrogen  3.468  N/A
ARG 159.A NH2  ASP 38.A OD2   no hydrogen  2.947  N/A
ALA 160.A N    THR 157.A OG1  no hydrogen  3.117  N/A
MET 161.A N    THR 157.A O    no hydrogen  3.030  N/A
ALA 162.A N    PRO 158.A O    no hydrogen  2.930  N/A
GLN 163.A N    ARG 159.A O    no hydrogen  3.098  N/A
THR 164.A N    ALA 160.A O    no hydrogen  2.977  N/A
THR 164.A OG1  ASP 132.A OD2  no hydrogen  2.627  N/A
THR 164.A OG1  ALA 160.A O    no hydrogen  3.273  N/A
LEU 165.A N    MET 161.A O    no hydrogen  2.871  N/A
ARG 166.A N    ALA 162.A O    no hydrogen  3.009  N/A
ARG 166.A NH1  ASN 30.A OD1   no hydrogen  3.206  N/A
ARG 166.A NH2  ASN 30.A OD1   no hydrogen  2.971  N/A
GLN 167.A N    GLN 163.A O    no hydrogen  3.025  N/A
LEU 168.A N    THR 164.A O    no hydrogen  2.908  N/A
THR 169.A N    LEU 165.A O    no hydrogen  2.913  N/A
THR 169.A OG1  LEU 165.A O    no hydrogen  2.747  N/A
LEU 170.A N    ARG 166.A O    no hydrogen  2.845  N/A
GLY 171.A N    ARG 166.A O    no hydrogen  2.921  N/A
ALA 173.A N    GLN 167.A O    no hydrogen  3.292  N/A
GLY 175.A N    GLU 60.A OE2   no hydrogen  2.765  N/A
ARG 179.A N    GLY 175.A O    no hydrogen  2.832  N/A
ARG 179.A NE   GLU 176.A OE2  no hydrogen  3.462  N/A
ARG 179.A NH1  GLY 171.A O    no hydrogen  3.028  N/A
ALA 180.A N    GLU 176.A O    no hydrogen  3.009  N/A
GLN 181.A N    THR 177.A O    no hydrogen  3.006  N/A
LEU 182.A N    GLN 178.A O    no hydrogen  2.916  N/A
VAL 183.A N    ARG 179.A O    no hydrogen  2.995  N/A
THR 184.A N    ALA 180.A O    no hydrogen  2.926  N/A
THR 184.A OG1  ALA 180.A O    no hydrogen  3.054  N/A
TRP 185.A N    GLN 181.A O    no hydrogen  2.989  N/A
LEU 186.A N    LEU 182.A O    no hydrogen  2.936  N/A
LYS 187.A N    VAL 183.A O    no hydrogen  2.871  N/A
GLY 188.A N    THR 184.A O    no hydrogen  3.150  N/A
GLY 188.A N    TRP 185.A O    no hydrogen  3.011  N/A
ASN 189.A N    LEU 186.A O    no hydrogen  3.092  N/A
ASN 189.A ND2  THR 191.A OG1  no hydrogen  3.113  N/A
ASN 189.A ND2  ASP 208.A OD1  no hydrogen  2.944  N/A
THR 190.A N    GLN 103.A O    no hydrogen  3.101  N/A
THR 190.A OG1  GLN 103.A O    no hydrogen  2.678  N/A
THR 191.A N    ASN 189.A OD1  no hydrogen  3.192  N/A
THR 191.A OG1  ASN 189.A OD1  no hydrogen  3.246  N/A
THR 191.A OG1  THR 210.A OG1  no hydrogen  2.759  N/A
SER 195.A N    GLY 192.A O    no hydrogen  3.147  N/A
ILE 196.A N    ASP 220.A OD2  no hydrogen  2.958  N/A
ALA 198.A N    SER 195.A O    no hydrogen  3.051  N/A
GLY 199.A N    ILE 196.A O    no hydrogen  2.898  N/A
LEU 200.A N    ARG 197.A O    no hydrogen  3.151  N/A
TRP 204.A N    PRO 201.A O    no hydrogen  3.147  N/A
THR 205.A N    TRP 225.A O    no hydrogen  3.213  N/A
GLY 207.A N    VAL 223.A O    no hydrogen  2.988  N/A
ASP 208.A N    LEU 186.A O    no hydrogen  3.290  N/A
LYS 209.A N    ILE 221.A O    no hydrogen  2.965  N/A
LYS 209.A NZ   SER 105.A OG   no hydrogen  2.869  N/A
LYS 209.A NZ   THR 210.A O    no hydrogen  2.900  N/A
THR 210.A OG1  THR 191.A OG1  no hydrogen  2.759  N/A
GLY 211.A N    ASN 219.A O    no hydrogen  2.919  N/A
GLY 213.A N    THR 217.A O    no hydrogen  3.127  N/A
ASP 214.A N    ASN 145.A O    no hydrogen  3.135  N/A
TYR 215.A N    GLN 243.A O    no hydrogen  2.843  N/A
THR 217.A N    ASP 214.A O    no hydrogen  3.090  N/A
THR 217.A OG1  ASP 214.A O    no hydrogen  2.730  N/A
THR 217.A OG1  TYR 215.A O    no hydrogen  3.492  N/A
THR 217.A OG1  THR 239.A OG1  no hydrogen  2.859  N/A
THR 218.A N    PHE 238.A O    no hydrogen  2.833  N/A
THR 218.A OG1  GLY 216.A O    no hydrogen  2.900  N/A
ASN 219.A N    GLY 211.A O    no hydrogen  2.845  N/A
ASN 219.A ND2  PRO 42.A O     no hydrogen  2.848  N/A
ASN 219.A ND2  MET 43.A O     no hydrogen  3.031  N/A
ASP 220.A N    THR 236.A O    no hydrogen  2.979  N/A
ILE 221.A N    LYS 209.A O    no hydrogen  3.047  N/A
ALA 222.A N    LEU 234.A O    no hydrogen  2.764  N/A
VAL 223.A N    GLY 207.A O    no hydrogen  2.869  N/A
ILE 224.A N    LEU 232.A O    no hydrogen  2.727  N/A
TRP 225.A N    THR 205.A O    no hydrogen  2.891  N/A
ARG 229.A N    PRO 226.A O    no hydrogen  3.449  N/A
LEU 232.A N    ILE 224.A O    no hydrogen  2.807  N/A
VAL 233.A N    ILE 25.A O     no hydrogen  3.010  N/A
LEU 234.A N    ALA 222.A O    no hydrogen  2.863  N/A
VAL 235.A N    ALA 23.A O     no hydrogen  2.869  N/A
THR 236.A N    ASP 220.A O    no hydrogen  2.913  N/A
THR 236.A OG1  ASP 220.A O    no hydrogen  3.389  N/A
TYR 237.A N    GLY 21.A O     no hydrogen  2.796  N/A
TYR 237.A OH   THR 46.A OG1   no hydrogen  2.713  N/A
PHE 238.A N    ASN 219.A OD1  no hydrogen  3.206  N/A
THR 239.A N    ARG 19.A O     no hydrogen  3.044  N/A
THR 239.A OG1  TYR 215.A O    no hydrogen  3.470  N/A
THR 239.A OG1  THR 217.A OG1  no hydrogen  2.859  N/A
GLN 240.A N    TYR 215.A O    no hydrogen  2.829  N/A
GLN 240.A NE2  GLY 216.A O    no hydrogen  2.950  N/A
GLN 240.A NE2  GLU 246.A O    no hydrogen  2.791  N/A
ALA 245.A N    GLN 242.A O    no hydrogen  3.083  N/A
ARG 248.A N    THR 218.A OG1  no hydrogen  3.088  N/A
ARG 248.A NE   ASP 250.A OD1  no hydrogen  2.896  N/A
ARG 248.A NH2  ASP 250.A OD2  no hydrogen  2.946  N/A
VAL 251.A N    ARG 248.A O    no hydrogen  3.013  N/A
ALA 253.A N    ARG 249.A O    no hydrogen  3.060  N/A
SER 254.A N    ASP 250.A O    no hydrogen  2.856  N/A
SER 254.A OG   ASP 250.A O    no hydrogen  3.120  N/A
ALA 255.A N    VAL 251.A O    no hydrogen  2.916  N/A
ALA 256.A N    LEU 252.A O    no hydrogen  2.929  N/A
ARG 257.A N    ALA 253.A O    no hydrogen  2.857  N/A
ILE 258.A N    SER 254.A O    no hydrogen  3.107  N/A
ILE 259.A N    ALA 255.A O    no hydrogen  2.972  N/A
ALA 260.A N    ALA 256.A O    no hydrogen  2.858  N/A
GLU 261.A N    ARG 257.A O    no hydrogen  2.927  N/A
GLY 262.A N    ILE 258.A O    no hydrogen  3.050  N/A
GLY 262.A N    ILE 259.A O    no hydrogen  3.117  N/A
LEU 263.A N    ALA 260.A O    no hydrogen  3.207  N/A