Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 2nud_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
LEU 4.A N      SER 54.A O     no hydrogen  3.059  N/A
GLY 6.A N      ALA 252.A O    no hydrogen  2.848  N/A
SER 8.A OG     ARG 10.A O     no hydrogen  2.816  N/A
LEU 12.A N     GLU 256.A OE2  no hydrogen  2.939  N/A
ASP 16.A N     GLU 13.A O     no hydrogen  2.868  N/A
GLN 17.A N     GLU 13.A O     no hydrogen  3.115  N/A
GLN 17.A NE2   LEU 12.A O     no hydrogen  2.787  N/A
CYS 18.A N     VAL 14.A O     no hydrogen  3.109  N/A
CYS 18.A SG    VAL 14.A O     no hydrogen  3.372  N/A
CYS 18.A SG    ARG 36.A O     no hydrogen  4.016  N/A
LEU 19.A N     ASP 16.A O     no hydrogen  2.679  N/A
ILE 20.A N     GLN 17.A O     no hydrogen  3.235  N/A
GLY 21.A N     GLU 243.A OE1  no hydrogen  3.018  N/A
ALA 22.A N     LEU 19.A O     no hydrogen  3.292  N/A
ARG 24.A NH1   PHE 260.A O    no hydrogen  2.749  N/A
ARG 24.A NH2   PHE 260.A O    no hydrogen  3.288  N/A
TRP 25.A N     ALA 23.A O     no hydrogen  3.034  N/A
ASP 28.A N     TRP 25.A O     no hydrogen  2.793  N/A
THR 32.A N     LYS 29.A O     no hydrogen  3.207  N/A
THR 32.A OG1   GLU 34.A OE1   no hydrogen  2.484  N/A
THR 32.A OG1   GLU 34.A OE2   no hydrogen  2.822  N/A
GLU 34.A N     GLU 34.A OE1   no hydrogen  2.523  N/A
ASN 35.A N     THR 32.A O     no hydrogen  3.239  N/A
ARG 36.A N     THR 32.A O     no hydrogen  3.006  N/A
ALA 37.A N     PRO 33.A O     no hydrogen  3.039  N/A
TYR 38.A N     GLU 34.A O     no hydrogen  2.966  N/A
CYS 39.A N     ASN 35.A O     no hydrogen  2.816  N/A
CYS 39.A SG    ILE 20.A O     no hydrogen  2.974  N/A
CYS 39.A SG    ASN 35.A O     no hydrogen  3.214  N/A
GLN 40.A N     ARG 36.A O     no hydrogen  2.808  N/A
GLN 40.A NE2   GLN 17.A OE1   no hydrogen  3.070  N/A
SER 41.A N     ALA 37.A O     no hydrogen  2.854  N/A
MET 42.A N     TYR 38.A O     no hydrogen  3.058  N/A
TYR 43.A N     CYS 39.A O     no hydrogen  3.002  N/A
TYR 43.A OH    GLN 11.A OE1   no hydrogen  3.133  N/A
TYR 43.A OH    GLU 256.A OE2  no hydrogen  2.490  N/A
ASN 44.A N     GLN 40.A O     no hydrogen  3.077  N/A
SER 45.A N     SER 41.A O     no hydrogen  2.880  N/A
SER 45.A OG    SER 41.A O     no hydrogen  3.071  N/A
ILE 46.A N     MET 42.A O     no hydrogen  2.873  N/A
ARG 47.A N     TYR 43.A O     no hydrogen  3.248  N/A
ARG 47.A NH1   SER 8.A O      no hydrogen  3.384  N/A
ARG 47.A NH2   SER 8.A O      no hydrogen  2.549  N/A
ARG 47.A NH2   GLU 256.A OE1  no hydrogen  3.297  N/A
ARG 47.A NH2   GLU 256.A OE2  no hydrogen  3.336  N/A
SER 48.A N     ASN 44.A O     no hydrogen  3.054  N/A
ALA 49.A N     SER 45.A O     no hydrogen  2.985  N/A
GLY 50.A N     ILE 46.A O     no hydrogen  2.764  N/A
ASP 51.A N     ARG 47.A O     no hydrogen  2.847  N/A
GLU 52.A N     SER 48.A O     no hydrogen  3.237  N/A
ILE 53.A N     ALA 49.A O     no hydrogen  2.842  N/A
SER 54.A N     GLY 50.A O     no hydrogen  2.952  N/A
SER 54.A OG    GLY 50.A O     no hydrogen  3.498  N/A
SER 54.A OG    ASP 51.A O     no hydrogen  2.489  N/A
ARG 55.A N     ASP 51.A O     no hydrogen  3.248  N/A
ARG 55.A N     GLU 52.A O     no hydrogen  2.932  N/A
ARG 55.A NH1   ASP 51.A O     no hydrogen  3.130  N/A
GLY 56.A N     ILE 53.A O     no hydrogen  2.978  N/A
GLY 57.A N     GLU 52.A O     no hydrogen  2.923  N/A
THR 59.A OG1   GLU 63.A OE1   no hydrogen  3.361  N/A
GLU 63.A N     SER 60.A OG    no hydrogen  2.788  N/A
LEU 64.A N     SER 60.A O     no hydrogen  3.062  N/A
TRP 65.A N     PHE 61.A O     no hydrogen  2.757  N/A
TRP 65.A NE1   ASP 234.A OD2  no hydrogen  2.846  N/A
GLY 66.A N     GLU 62.A O     no hydrogen  2.822  N/A
ARG 67.A N     GLU 63.A O     no hydrogen  3.049  N/A
ALA 68.A N     LEU 64.A O     no hydrogen  3.032  N/A
THR 69.A N     TRP 65.A O     no hydrogen  2.998  N/A
THR 69.A OG1   TRP 65.A O     no hydrogen  2.866  N/A
GLU 70.A N     GLY 66.A O     no hydrogen  3.059  N/A
TRP 71.A N     ARG 67.A O     no hydrogen  3.082  N/A
TRP 71.A NE1   SER 41.A OG    no hydrogen  3.099  N/A
ARG 72.A N     ALA 68.A O     no hydrogen  3.006  N/A
ARG 72.A NH1   ARG 72.A O     no hydrogen  2.891  N/A
LEU 73.A N     THR 69.A O     no hydrogen  2.840  N/A
SER 74.A N     GLU 70.A O     no hydrogen  3.024  N/A
SER 74.A OG    TRP 71.A O     no hydrogen  2.668  N/A
LYS 75.A N     ARG 72.A O     no hydrogen  3.175  N/A
LYS 75.A NZ    SER 41.A OG    no hydrogen  2.942  N/A
LEU 76.A N     LEU 73.A O     no hydrogen  3.058  N/A
LEU 79.A N     GLU 77.A OE2   no hydrogen  3.233  N/A
PHE 83.A N     LEU 79.A O     no hydrogen  3.313  N/A
ALA 84.A N     SER 81.A O     no hydrogen  3.309  N/A
SER 85.A OG    SER 81.A O     no hydrogen  2.597  N/A
ARG 87.A N     PRO 233.A O    no hydrogen  2.825  N/A
ARG 87.A NE    MET 232.A O    no hydrogen  2.489  N/A
ARG 87.A NH1   THR 188.A O    no hydrogen  2.876  N/A
ARG 87.A NH1   ALA 231.A O    no hydrogen  2.871  N/A
ARG 87.A NH1   MET 232.A O    no hydrogen  2.984  N/A
ARG 87.A NH2   THR 188.A O    no hydrogen  3.234  N/A
THR 88.A OG1   ASP 90.A OD1   no hydrogen  2.411  N/A
THR 91.A N     THR 88.A O     no hydrogen  3.051  N/A
THR 91.A OG1   THR 88.A O     no hydrogen  2.753  N/A
THR 95.A N     ILE 185.A O    no hydrogen  3.009  N/A
THR 95.A OG1   HIS 187.A NE2  no hydrogen  2.631  N/A
LEU 97.A N     ASP 183.A O    no hydrogen  2.774  N/A
VAL 98.A N     PRO 96.A O     no hydrogen  2.818  N/A
TYR 101.A N    VAL 98.A O     no hydrogen  2.749  N/A
VAL 104.A N    TYR 101.A O    no hydrogen  2.784  N/A
LEU 105.A N    LYS 102.A O    no hydrogen  3.102  N/A
ARG 107.A NH1  GLU 269.A OE1  no hydrogen  3.540  N/A
ARG 107.A NH1  GLU 269.A OE2  no hydrogen  2.980  N/A
ARG 107.A NH2  GLU 269.A OE1  no hydrogen  2.920  N/A
VAL 108.A N    VAL 104.A O    no hydrogen  2.943  N/A
VAL 108.A N    LEU 105.A O    no hydrogen  3.208  N/A
VAL 109.A N    LEU 105.A O    no hydrogen  3.030  N/A
ASP 110.A N    ALA 106.A O    no hydrogen  2.969  N/A
HIS 111.A N    VAL 108.A O    no hydrogen  3.267  N/A
HIS 111.A NE2  LEU 272.A O    no hydrogen  2.906  N/A
ASP 113.A N    HIS 111.A ND1  no hydrogen  2.733  N/A
ALA 114.A N    HIS 111.A O    no hydrogen  3.160  N/A
HIS 115.A N    VAL 131.A O    no hydrogen  3.023  N/A
GLU 117.A N    VAL 129.A O    no hydrogen  3.154  N/A
MET 119.A N    LEU 127.A O    no hydrogen  2.690  N/A
ASP 121.A N    GLY 125.A O    no hydrogen  2.774  N/A
LEU 123.A N    ASP 121.A OD2  no hydrogen  2.949  N/A
PHE 124.A N    ASP 121.A OD2  no hydrogen  2.732  N/A
GLY 125.A N    ASP 121.A O    no hydrogen  2.658  N/A
LEU 127.A N    MET 119.A O    no hydrogen  2.663  N/A
ASN 128.A N    ASP 153.A OD2  no hydrogen  3.357  N/A
VAL 129.A N    GLU 117.A O    no hydrogen  3.131  N/A
LYS 130.A N    VAL 150.A O    no hydrogen  2.842  N/A
LYS 130.A NZ   ASP 116.A OD2  no hydrogen  2.556  N/A
VAL 131.A N    HIS 115.A O    no hydrogen  2.731  N/A
TYR 132.A N    PHE 148.A O    no hydrogen  3.115  N/A
ARG 133.A NE   GLU 117.A OE1  no hydrogen  2.639  N/A
ARG 133.A NH2  GLU 117.A OE1  no hydrogen  3.267  N/A
ARG 133.A NH2  GLU 117.A OE2  no hydrogen  2.864  N/A
GLN 134.A N    ASN 146.A O    no hydrogen  2.821  N/A
ALA 136.A N    ILE 143.A O    no hydrogen  2.954  N/A
LEU 138.A N    ASN 141.A O    no hydrogen  3.112  N/A
ASN 141.A N    LEU 138.A O    no hydrogen  3.308  N/A
ILE 143.A N    ALA 136.A O    no hydrogen  2.914  N/A
LEU 145.A N    GLN 134.A O    no hydrogen  2.687  N/A
ASN 146.A ND2  SER 230.A O    no hydrogen  2.770  N/A
THR 147.A N    ASP 186.A O    no hydrogen  2.907  N/A
PHE 148.A N    TYR 132.A O    no hydrogen  2.870  N/A
ARG 149.A N    ARG 184.A O    no hydrogen  2.844  N/A
VAL 150.A N    LYS 130.A O    no hydrogen  3.057  N/A
ALA 151.A N    ASP 183.A OD1  no hydrogen  2.900  N/A
THR 152.A N    ASN 128.A O    no hydrogen  3.300  N/A
THR 154.A N    THR 152.A O    no hydrogen  2.581  N/A
THR 154.A OG1  THR 152.A O    no hydrogen  3.288  N/A
TYR 156.A OH   PHE 124.A O    no hydrogen  2.936  N/A
LEU 157.A N    ASP 153.A O    no hydrogen  3.259  N/A
ARG 158.A N    THR 154.A O    no hydrogen  3.167  N/A
ASP 159.A N    GLU 155.A O    no hydrogen  3.356  N/A
ARG 160.A N    TYR 156.A O    no hydrogen  2.864  N/A
ARG 160.A NE   LEU 123.A O    no hydrogen  3.061  N/A
ARG 160.A NH2  LEU 123.A O    no hydrogen  3.088  N/A
VAL 161.A N    LEU 157.A O    no hydrogen  2.679  N/A
HIS 163.A N    ASP 159.A O    no hydrogen  3.347  N/A
LEU 164.A N    ARG 160.A O    no hydrogen  3.212  N/A
ARG 165.A N    VAL 161.A O    no hydrogen  3.182  N/A
THR 166.A OG1  HIS 163.A O    no hydrogen  2.979  N/A
GLU 167.A N    HIS 163.A O    no hydrogen  2.902  N/A
LEU 168.A N    LEU 164.A O    no hydrogen  2.766  N/A
LEU 173.A N    GLY 169.A O    no hydrogen  2.902  N/A
LYS 174.A N    ALA 170.A O    no hydrogen  2.792  N/A
GLN 175.A N    LYS 171.A O    no hydrogen  3.041  N/A
HIS 176.A N    ALA 172.A O    no hydrogen  3.039  N/A
LEU 177.A N    LEU 173.A O    no hydrogen  2.712  N/A
GLN 178.A N    LYS 174.A O    no hydrogen  2.836  N/A
GLN 178.A NE2  GLN 178.A O    no hydrogen  3.479  N/A
ARG 179.A N    HIS 176.A O    no hydrogen  3.082  N/A
TYR 180.A N    HIS 176.A O    no hydrogen  2.732  N/A
ASP 183.A N    ASN 181.A OD1  no hydrogen  3.195  N/A
ARG 184.A N    ARG 149.A O    no hydrogen  2.964  N/A
ARG 184.A NH1  ASN 181.A O    no hydrogen  2.842  N/A
ILE 185.A N    THR 95.A O     no hydrogen  2.799  N/A
ASP 186.A N    THR 147.A O    no hydrogen  2.815  N/A
HIS 187.A N    ALA 93.A O     no hydrogen  2.962  N/A
HIS 187.A ND1  ASN 146.A OD1  no hydrogen  2.745  N/A
HIS 187.A NE2  THR 95.A OG1   no hydrogen  2.631  N/A
THR 188.A N    ASN 146.A OD1  no hydrogen  3.277  N/A
THR 188.A OG1  SER 230.A O    no hydrogen  2.814  N/A
SER 191.A N    ASN 189.A OD1  no hydrogen  2.958  N/A
SER 191.A OG   ASN 189.A OD1  no hydrogen  3.067  N/A
TYR 192.A N    ASN 189.A O    no hydrogen  2.946  N/A
LEU 193.A N    ALA 190.A O    no hydrogen  2.985  N/A
ILE 196.A N    TYR 192.A O    no hydrogen  2.948  N/A
LYS 197.A N    LEU 193.A O    no hydrogen  2.740  N/A
LYS 197.A NZ   GLU 86.A OE2   no hydrogen  3.523  N/A
ASP 198.A N    PRO 194.A O    no hydrogen  3.244  N/A
HIS 199.A N    ILE 195.A O    no hydrogen  3.260  N/A
LEU 200.A N    ILE 196.A O    no hydrogen  2.873  N/A
ASN 201.A N    LYS 197.A O    no hydrogen  3.043  N/A
ASN 201.A N    ASP 198.A O    no hydrogen  3.203  N/A
ASP 202.A N    ASP 198.A O    no hydrogen  3.246  N/A
LEU 203.A N    HIS 199.A O    no hydrogen  3.017  N/A
TYR 204.A N    LEU 200.A O    no hydrogen  2.931  N/A
TYR 204.A OH   ILE 58.A O     no hydrogen  2.453  N/A
ARG 205.A N    ASN 201.A O    no hydrogen  2.894  N/A
GLN 206.A N    ASP 202.A O    no hydrogen  3.049  N/A
GLN 206.A NE2  ASP 202.A O    no hydrogen  3.509  N/A
ALA 207.A N    LEU 203.A O    no hydrogen  2.858  N/A
ILE 208.A N    ARG 205.A O    no hydrogen  3.392  N/A
SER 209.A N    GLN 206.A O    no hydrogen  3.171  N/A
SER 209.A OG   GLN 206.A O    no hydrogen  3.289  N/A
SER 213.A N    GLU 216.A OE1  no hydrogen  2.794  N/A
GLU 216.A N    SER 213.A OG   no hydrogen  3.046  N/A
LEU 217.A N    SER 213.A O    no hydrogen  2.955  N/A
ILE 218.A N    GLN 214.A O    no hydrogen  2.849  N/A
SER 219.A N    ALA 215.A O    no hydrogen  3.065  N/A
SER 219.A OG   ALA 215.A O    no hydrogen  3.347  N/A
LEU 220.A N    GLU 216.A O    no hydrogen  2.881  N/A
ILE 221.A N    LEU 217.A O    no hydrogen  3.003  N/A
ALA 222.A N    ILE 218.A O    no hydrogen  2.898  N/A
ARG 223.A N    SER 219.A O    no hydrogen  2.892  N/A
ARG 223.A NH1  GLU 275.A OE2  no hydrogen  2.755  N/A
ARG 223.A NH1  GLU 276.A OE2  no hydrogen  2.566  N/A
ARG 223.A NH2  GLU 276.A OE1  no hydrogen  2.855  N/A
ARG 223.A NH2  GLU 276.A OE2  no hydrogen  2.867  N/A
THR 224.A N    LEU 220.A O    no hydrogen  2.976  N/A
THR 224.A OG1  LEU 220.A O    no hydrogen  2.928  N/A
HIS 225.A N    ILE 221.A O    no hydrogen  2.899  N/A
TRP 226.A N    ALA 222.A O    no hydrogen  2.893  N/A
TRP 226.A NE1  SER 273.A O    no hydrogen  3.097  N/A
TRP 227.A N    ARG 223.A O    no hydrogen  2.935  N/A
TRP 227.A NE1  GLU 275.A OE2  no hydrogen  3.225  N/A
ALA 228.A N    THR 224.A O    no hydrogen  2.960  N/A
ALA 229.A N    HIS 225.A O    no hydrogen  2.960  N/A
SER 230.A N    TRP 226.A O    no hydrogen  2.870  N/A
SER 230.A OG   GLN 134.A OE1  no hydrogen  2.853  N/A
SER 230.A OG   TRP 226.A O    no hydrogen  2.828  N/A
ALA 231.A N    TRP 227.A O    no hydrogen  2.977  N/A
MET 232.A N    ALA 228.A O    no hydrogen  3.173  N/A
ASP 234.A N    SER 238.A OG   no hydrogen  3.007  N/A
GLN 235.A N    SER 85.A O     no hydrogen  2.968  N/A
GLN 235.A NE2  GLU 86.A O     no hydrogen  3.338  N/A
SER 238.A OG   ASP 234.A O    no hydrogen  3.217  N/A
LYS 241.A N    GLY 237.A O    no hydrogen  3.069  N/A
LYS 241.A NZ   PHE 83.A O     no hydrogen  2.928  N/A
LYS 241.A NZ   ASP 234.A OD2  no hydrogen  2.951  N/A
LYS 241.A NZ   ARG 236.A O    no hydrogen  2.476  N/A
ALA 242.A N    SER 238.A O    no hydrogen  2.796  N/A
GLU 243.A N    ALA 239.A O    no hydrogen  3.003  N/A
PHE 244.A N    ALA 240.A O    no hydrogen  2.998  N/A
ALA 245.A N    LYS 241.A O    no hydrogen  2.924  N/A
ALA 246.A N    ALA 242.A O    no hydrogen  3.055  N/A
ARG 247.A N    GLU 243.A O    no hydrogen  2.994  N/A
ALA 248.A N    PHE 244.A O    no hydrogen  2.820  N/A
ILE 249.A N    ALA 245.A O    no hydrogen  3.091  N/A
ALA 250.A N    ALA 246.A O    no hydrogen  3.097  N/A
SER 251.A N    ARG 247.A O    no hydrogen  2.723  N/A
ALA 252.A N    ALA 248.A O    no hydrogen  2.892  N/A
ALA 252.A N    ILE 249.A O    no hydrogen  3.268  N/A
HIS 253.A N    ALA 250.A O    no hydrogen  2.947  N/A
HIS 253.A NE2  ALA 207.A O    no hydrogen  2.562  N/A
GLY 254.A N    SER 251.A O    no hydrogen  3.152  N/A
ILE 255.A N    ALA 250.A O    no hydrogen  3.161  N/A
ARG 261.A N    LEU 285.A O    no hydrogen  2.828  N/A
ARG 261.A NE   SER 284.A O    no hydrogen  2.870  N/A
ARG 261.A NH1  ASP 289.A OD2  no hydrogen  2.749  N/A
ARG 261.A NH2  ASP 289.A OD1  no hydrogen  3.384  N/A
ARG 261.A NH2  ASP 289.A OD2  no hydrogen  3.034  N/A
GLY 263.A N    ARG 24.A O     no hydrogen  2.709  N/A
ASN 264.A N    ARG 261.A O    no hydrogen  3.172  N/A
GLU 269.A N    VAL 265.A O    no hydrogen  2.887  N/A
ALA 270.A N    SER 266.A O    no hydrogen  2.997  N/A
MET 271.A N    ASP 267.A O    no hydrogen  2.990  N/A
LEU 272.A N    ILE 268.A O    no hydrogen  3.110  N/A
SER 273.A N    ALA 270.A O    no hydrogen  3.134  N/A
SER 273.A OG   GLU 269.A O    no hydrogen  3.368  N/A
SER 273.A OG   ALA 270.A O    no hydrogen  3.524  N/A
SER 273.A OG   GLY 274.A O    no hydrogen  3.536  N/A
GLY 274.A N    GLU 277.A OE1  no hydrogen  3.356  N/A
PHE 278.A N    GLY 274.A O    no hydrogen  3.060  N/A
VAL 279.A N    GLU 275.A O    no hydrogen  2.977  N/A
GLU 280.A N    GLU 276.A O    no hydrogen  2.937  N/A
LYS 281.A N    GLU 277.A O    no hydrogen  3.246  N/A
LYS 281.A NZ   GLU 277.A OE2  no hydrogen  3.513  N/A
TYR 282.A N    PHE 278.A O    no hydrogen  2.897  N/A
SER 284.A OG   LYS 281.A O    no hydrogen  2.483  N/A
LEU 285.A N    LYS 281.A O    no hydrogen  3.204  N/A
LEU 285.A N    TYR 282.A O    no hydrogen  2.907  N/A
LEU 286.A N    ARG 283.A O    no hydrogen  3.171  N/A
ASP 287.A N    PRO 259.A O    no hydrogen  3.021  N/A
ASP 289.A N    ASP 287.A OD1  no hydrogen  3.451  N/A