Finding intermodel H-bonds Finding intramodel H-bonds Constraints relaxed by 0.4 angstroms and 20 degrees Models used: #0 2nyd_A.cif H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): LYS 4.A N ASP 7.A OD2 no hydrogen 3.105 N/A LYS 4.A NZ ASP 35.A OD2 no hydrogen 2.950 N/A ILE 5.A N VAL 36.A O no hydrogen 2.800 N/A ALA 6.A N GLU 34.A O no hydrogen 2.881 N/A LEU 8.A N LYS 4.A O no hydrogen 3.064 N/A MET 9.A N ILE 5.A O no hydrogen 2.865 N/A THR 10.A N ALA 6.A O no hydrogen 3.149 N/A THR 10.A OG1 ALA 6.A O no hydrogen 3.086 N/A LEU 11.A N ASP 7.A O no hydrogen 3.132 N/A LEU 12.A N LEU 8.A O no hydrogen 2.879 N/A ASP 13.A N MET 9.A O no hydrogen 3.003 N/A HIS 14.A N THR 10.A O no hydrogen 2.940 N/A HIS 15.A N LEU 11.A O no hydrogen 3.146 N/A VAL 16.A N LEU 12.A O no hydrogen 2.739 N/A PHE 18.A N ASP 13.A OD1 no hydrogen 2.856 N/A THR 20.A N PRO 17.A O no hydrogen 3.015 N/A THR 20.A OG1 PRO 17.A O no hydrogen 2.689 N/A ALA 21.A N PHE 18.A O no hydrogen 3.232 N/A GLU 22.A N THR 101.A OG1 no hydrogen 2.749 N/A ASP 25.A N GLU 22.A O no hydrogen 3.081 N/A ASN 26.A N ASP 25.A OD1 no hydrogen 2.844 N/A GLY 28.A N ALA 98.A O no hydrogen 2.933 N/A LEU 30.A N LEU 96.A O no hydrogen 2.921 N/A ILE 31.A N LEU 96.A O no hydrogen 3.282 N/A ASP 33.A N ASN 95.A OD1 no hydrogen 3.109 N/A ASP 35.A N ASP 33.A OD1 no hydrogen 3.116 N/A VAL 36.A N ASP 33.A O no hydrogen 3.100 N/A VAL 38.A N MET 3.A O no hydrogen 2.899 N/A THR 39.A OG1 GLY 59.A O no hydrogen 2.992 N/A VAL 41.A N ASP 286.A O no hydrogen 2.914 N/A LEU 42.A N THR 62.A O no hydrogen 2.906 N/A THR 43.A N GLU 288.A O no hydrogen 2.824 N/A THR 43.A OG1 LYS 267.A O no hydrogen 2.728 N/A THR 43.A OG1 GLU 288.A O no hydrogen 3.545 N/A ALA 44.A N ILE 64.A O no hydrogen 2.845 N/A THR 48.A N ASP 46.A O no hydrogen 3.064 N/A VAL 51.A N THR 48.A OG1 no hydrogen 3.219 N/A VAL 52.A N THR 48.A O no hydrogen 3.042 N/A ASN 53.A N LEU 49.A O no hydrogen 2.966 N/A GLU 54.A N GLU 50.A O no hydrogen 2.904 N/A ALA 55.A N VAL 51.A O no hydrogen 2.971 N/A ILE 56.A N VAL 52.A O no hydrogen 3.066 N/A GLU 57.A N ASN 53.A O no hydrogen 3.001 N/A LYS 58.A N GLU 54.A O no hydrogen 2.889 N/A LYS 58.A NZ GLU 54.A OE1 no hydrogen 3.500 N/A GLY 59.A N ILE 56.A O no hydrogen 3.057 N/A TYR 60.A N ALA 55.A O no hydrogen 2.821 N/A TYR 60.A OH GLU 288.A OE2 no hydrogen 2.249 N/A ILE 63.A N ASN 95.A O no hydrogen 2.812 N/A ILE 64.A N LEU 42.A O no hydrogen 2.900 N/A SER 65.A N ILE 97.A O no hydrogen 2.892 N/A SER 65.A OG HIS 67.A O no hydrogen 2.748 N/A HIS 66.A N ALA 44.A O no hydrogen 3.043 N/A HIS 66.A ND1 MET 99.A O no hydrogen 2.885 N/A HIS 67.A N LEU 45.A O no hydrogen 2.929 N/A HIS 67.A ND1 ASP 46.A OD1 no hydrogen 2.815 N/A HIS 67.A NE2 GLU 263.A OE1 no hydrogen 3.228 N/A ASN 80.A N LYS 78.A O no hydrogen 2.793 N/A LEU 84.A N GLY 81.A O no hydrogen 3.174 N/A ILE 86.A N TYR 82.A O no hydrogen 3.117 N/A ARG 87.A N GLY 83.A O no hydrogen 2.867 N/A ARG 87.A NH2 LEU 77.A O no hydrogen 3.368 N/A LYS 88.A N LEU 84.A O no hydrogen 2.916 N/A LYS 88.A NZ ASN 53.A OD1 no hydrogen 2.820 N/A LEU 89.A N ILE 85.A O no hydrogen 2.942 N/A ILE 90.A N ILE 86.A O no hydrogen 3.152 N/A GLN 91.A N ARG 87.A O no hydrogen 2.853 N/A HIS 92.A N LYS 88.A O no hydrogen 3.011 N/A HIS 92.A N LEU 89.A O no hydrogen 3.169 N/A ASP 93.A N ILE 90.A O no hydrogen 3.005 N/A ILE 94.A N LEU 89.A O no hydrogen 2.731 N/A ASN 95.A N ASN 61.A O no hydrogen 2.780 N/A ASN 95.A ND2 ASN 61.A O no hydrogen 2.949 N/A LEU 96.A N ILE 31.A O no hydrogen 2.744 N/A ILE 97.A N ILE 63.A O no hydrogen 2.849 N/A ALA 98.A N GLY 28.A O no hydrogen 2.852 N/A MET 99.A N SER 65.A O no hydrogen 2.996 N/A HIS 100.A ND1 ASP 25.A OD1 no hydrogen 2.865 N/A THR 101.A N ASP 25.A OD2 no hydrogen 2.852 N/A THR 101.A OG1 ASP 25.A OD2 no hydrogen 2.513 N/A ASN 102.A ND2 VAL 16.A O no hydrogen 2.903 N/A LEU 103.A N HIS 100.A O no hydrogen 2.820 N/A ASP 104.A N HIS 100.A O no hydrogen 3.195 N/A VAL 105.A N THR 101.A O no hydrogen 3.103 N/A ASN 106.A N LEU 103.A O no hydrogen 3.389 N/A ASN 106.A ND2 HIS 15.A O no hydrogen 3.171 N/A TYR 108.A N ASN 106.A OD1 no hydrogen 2.900 N/A GLY 109.A N ASN 106.A O no hydrogen 2.841 N/A VAL 110.A N LEU 103.A O no hydrogen 3.063 N/A ASN 111.A ND2 ASP 104.A O no hydrogen 3.241 N/A MET 113.A N GLY 109.A O no hydrogen 2.904 N/A LEU 114.A N VAL 110.A O no hydrogen 2.827 N/A ALA 115.A N ASN 111.A O no hydrogen 2.938 N/A LYS 116.A N MET 112.A O no hydrogen 2.767 N/A VAL 117.A N MET 113.A O no hydrogen 3.039 N/A MET 118.A N LEU 114.A O no hydrogen 3.035 N/A GLY 119.A N LYS 116.A O no hydrogen 2.924 N/A LEU 120.A N ALA 115.A O no hydrogen 2.969 N/A LYS 121.A N GLU 177.A O no hydrogen 2.959 N/A LYS 121.A NZ ASP 179.A OD2 no hydrogen 2.764 N/A ASN 122.A ND2 GLU 177.A OE2 no hydrogen 2.797 N/A SER 124.A N MET 175.A O no hydrogen 2.858 N/A ILE 126.A N GLY 173.A O no hydrogen 2.990 N/A ASN 127.A ND2 LEU 172.A O no hydrogen 2.856 N/A ASN 128.A ND2 ILE 125.A O no hydrogen 3.567 N/A GLN 129.A N TYR 170.A O no hydrogen 2.759 N/A GLN 129.A NE2 THR 20.A O no hydrogen 2.935 N/A ASP 131.A N GLN 166.A O no hydrogen 2.680 N/A TYR 133.A N ILE 164.A O no hydrogen 2.911 N/A TYR 134.A N ILE 141.A O no hydrogen 3.089 N/A LYS 135.A N ILE 162.A O no hydrogen 2.850 N/A VAL 136.A N PHE 139.A O no hydrogen 2.848 N/A GLN 137.A N ASP 160.A O no hydrogen 2.786 N/A GLN 137.A NE2 GLU 138.A OE1 no hydrogen 3.528 N/A PHE 139.A N VAL 136.A O no hydrogen 3.182 N/A ILE 141.A N TYR 134.A O no hydrogen 2.888 N/A SER 147.A N TYR 144.A O no hydrogen 3.432 N/A ALA 149.A N GLN 145.A O no hydrogen 3.069 N/A GLU 150.A N SER 147.A O no hydrogen 3.219 N/A GLN 151.A N SER 147.A O no hydrogen 3.090 N/A LEU 152.A N ARG 148.A O no hydrogen 2.573 N/A ILE 153.A N ALA 149.A O no hydrogen 2.781 N/A LYS 154.A N GLU 150.A O no hydrogen 2.879 N/A ASP 160.A N GLN 137.A O no hydrogen 2.704 N/A ILE 162.A N LYS 135.A O no hydrogen 2.976 N/A ILE 164.A N TYR 133.A O no hydrogen 2.755 N/A GLN 166.A N ASP 131.A O no hydrogen 2.789 N/A THR 167.A OG1 GLN 130.A OE1 no hydrogen 3.435 N/A SER 168.A N GLN 129.A O no hydrogen 2.825 N/A SER 168.A OG ASP 131.A OD1 no hydrogen 3.379 N/A SER 168.A OG ASP 131.A OD2 no hydrogen 3.543 N/A TYR 170.A N SER 168.A OG no hydrogen 3.029 N/A GLY 171.A N VAL 105.A O no hydrogen 2.986 N/A VAL 174.A N ILE 215.A O no hydrogen 3.199 N/A MET 175.A N SER 124.A O no hydrogen 2.753 N/A ALA 176.A N ILE 213.A O no hydrogen 2.892 N/A GLU 177.A N LYS 121.A O no hydrogen 2.864 N/A VAL 178.A N LYS 211.A O no hydrogen 3.131 N/A MET 182.A N ILE 210.A O no hydrogen 3.137 N/A LEU 184.A N GLN 208.A O no hydrogen 2.745 N/A GLU 185.A N SER 206.A O no hydrogen 3.103 N/A ASP 186.A N THR 183.A OG1 no hydrogen 3.180 N/A PHE 187.A N THR 183.A O no hydrogen 2.838 N/A ALA 188.A N LEU 184.A O no hydrogen 2.942 N/A ALA 189.A N GLU 185.A O no hydrogen 2.982 N/A ASP 190.A N ASP 186.A O no hydrogen 2.785 N/A ILE 191.A N PHE 187.A O no hydrogen 2.955 N/A LYS 192.A N ALA 188.A O no hydrogen 2.935 N/A LYS 192.A NZ PRO 198.A O no hydrogen 3.494 N/A SER 193.A N ALA 189.A O no hydrogen 3.105 N/A LYS 194.A N ASP 190.A O no hydrogen 2.946 N/A LYS 194.A NZ MET 118.A O no hydrogen 2.964 N/A LYS 194.A NZ ASP 190.A OD2 no hydrogen 2.884 N/A LEU 195.A N ILE 191.A O no hydrogen 2.842 N/A ASN 196.A N SER 193.A O no hydrogen 3.168 N/A ILE 197.A N LYS 192.A O no hydrogen 2.823 N/A ARG 201.A N ASP 257.A O no hydrogen 3.412 N/A ARG 201.A NE ASP 257.A OD2 no hydrogen 3.000 N/A ARG 201.A NH2 ASP 257.A OD2 no hydrogen 3.053 N/A VAL 203.A N LEU 255.A O no hydrogen 2.832 N/A GLN 208.A N GLU 205.A O no hydrogen 3.068 N/A ILE 210.A N MET 182.A O no hydrogen 2.764 N/A LYS 211.A N ASP 233.A OD2 no hydrogen 2.839 N/A LYS 211.A NZ VAL 178.A O no hydrogen 2.907 N/A ARG 212.A N ASP 233.A OD2 no hydrogen 2.897 N/A ILE 213.A N ALA 176.A O no hydrogen 2.764 N/A ALA 214.A N VAL 234.A O no hydrogen 3.035 N/A ILE 215.A N VAL 174.A O no hydrogen 3.001 N/A ILE 216.A N VAL 236.A O no hydrogen 2.949 N/A GLY 217.A N ASN 111.A OD1 no hydrogen 2.626 N/A GLY 220.A N THR 237.A OG1 no hydrogen 2.710 N/A GLY 222.A N GLU 224.A OE1 no hydrogen 2.791 N/A TYR 223.A N GLY 220.A O no hydrogen 3.188 N/A GLU 224.A N GLU 224.A OE1 no hydrogen 2.642 N/A ALA 227.A N TYR 223.A O no hydrogen 3.080 N/A VAL 228.A N GLU 224.A O no hydrogen 3.198 N/A GLN 229.A N.A TYR 225.A O no hydrogen 3.008 N/A GLN 229.A N.B TYR 225.A O no hydrogen 3.043 N/A GLN 230.A N GLN 226.A O no hydrogen 2.766 N/A GLN 230.A NE2 ASN 127.A OD1 no hydrogen 2.948 N/A GLY 231.A N VAL 228.A O no hydrogen 3.070 N/A ALA 232.A N ALA 227.A O no hydrogen 2.969 N/A ASP 233.A N ARG 212.A O no hydrogen 2.756 N/A PHE 235.A N ASN 254.A O no hydrogen 2.961 N/A VAL 236.A N ALA 214.A O no hydrogen 2.738 N/A THR 237.A N ILE 256.A O no hydrogen 3.036 N/A THR 237.A OG1 ILE 216.A O no hydrogen 2.588 N/A ILE 240.A N ASP 257.A OD2 no hydrogen 3.118 N/A ALA 245.A N LYS 241.A O no hydrogen 2.898 N/A LEU 246.A N HIS 242.A O no hydrogen 2.848 N/A ASP 247.A N HIS 243.A O no hydrogen 3.037 N/A ALA 248.A N ASP 244.A O no hydrogen 3.146 N/A LYS 249.A N ALA 245.A O no hydrogen 2.869 N/A LYS 249.A NZ GLU 205.A OE2 no hydrogen 3.387 N/A ILE 250.A N LEU 246.A O no hydrogen 3.004 N/A HIS 251.A N ASP 247.A O no hydrogen 2.905 N/A GLY 252.A N LYS 249.A O no hydrogen 3.044 N/A VAL 253.A N ALA 248.A O no hydrogen 2.765 N/A ASN 254.A ND2 ASP 233.A O no hydrogen 2.998 N/A LEU 255.A N VAL 203.A O no hydrogen 3.082 N/A ILE 256.A N PHE 235.A O no hydrogen 2.947 N/A ASP 257.A N ARG 201.A O no hydrogen 2.855 N/A ILE 258.A N THR 237.A O no hydrogen 2.857 N/A ASN 259.A N ASP 257.A OD1 no hydrogen 2.859 N/A ASN 259.A ND2 SER 199.A O no hydrogen 2.951 N/A HIS 260.A ND1 ASP 239.A OD2 no hydrogen 2.690 N/A SER 262.A N ASN 259.A O no hydrogen 3.021 N/A SER 262.A OG ILE 258.A O no hydrogen 2.671 N/A GLU 263.A N HIS 260.A O no hydrogen 3.000 N/A TYR 264.A N TYR 261.A O no hydrogen 2.799 N/A TYR 264.A OH LEU 195.A O no hydrogen 2.585 N/A VAL 265.A N SER 262.A O no hydrogen 3.364 N/A MET 266.A N GLU 263.A O no hydrogen 2.966 N/A LYS 267.A N TYR 264.A O no hydrogen 2.974 N/A LYS 267.A NZ SER 290.A O no hydrogen 2.949 N/A GLY 269.A N VAL 265.A O no hydrogen 3.063 N/A LEU 270.A N MET 266.A O no hydrogen 2.650 N/A LYS 271.A N LYS 267.A O no hydrogen 2.995 N/A LYS 271.A NZ VAL 287.A O no hydrogen 3.389 N/A THR 272.A N GLU 268.A O no hydrogen 3.033 N/A THR 272.A OG1 GLU 268.A O no hydrogen 3.153 N/A LEU 273.A N GLY 269.A O no hydrogen 3.154 N/A LEU 274.A N LEU 270.A O no hydrogen 2.917 N/A MET 275.A N LYS 271.A O no hydrogen 2.961 N/A ASN 276.A N THR 272.A O no hydrogen 3.130 N/A TRP 277.A N LEU 273.A O no hydrogen 2.960 N/A PHE 278.A N LEU 274.A O no hydrogen 2.960 N/A ASN 279.A N MET 275.A O no hydrogen 2.887 N/A ILE 280.A N ASN 276.A O no hydrogen 3.049 N/A GLU 281.A N TRP 277.A O no hydrogen 3.264 N/A LYS 282.A N ASN 279.A O no hydrogen 2.916 N/A ILE 283.A N PHE 278.A O no hydrogen 2.905 N/A GLU 288.A N VAL 41.A O no hydrogen 2.879 N/A SER 290.A N THR 43.A O no hydrogen 2.910 N/A SER 290.A OG GLU 54.A OE2 no hydrogen 2.419 N/A THR 291.A N GLU 54.A OE1 no hydrogen 3.071 N/A THR 291.A OG1 GLU 54.A OE1 no hydrogen 3.564 N/A ILE 292.A N SER 290.A OG no hydrogen 3.368 N/A THR 294.A N TYR 261.A OH no hydrogen 3.115 N/A ASP 295.A N ASN 293.A OD1 no hydrogen 3.001 N/A PHE 297.A N ASP 295.A OD1 no hydrogen 3.028 N/A