Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 3dna_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
ARG 6.A N      PHE 3.A O      no hydrogen  2.835  N/A
ARG 6.A NH1    ARG 6.A O      no hydrogen  2.927  N/A
ILE 7.A N      GLU 4.A O      no hydrogen  3.033  N/A
GLU 9.A N      LEU 5.A O      no hydrogen  2.775  N/A
GLY 10.A N     ARG 6.A O      no hydrogen  3.003  N/A
ARG 12.A N     GLY 26.A O     no hydrogen  3.089  N/A
ILE 15.A N     GLY 54.A O     no hydrogen  3.076  N/A
TYR 16.A N     THR 24.A O     no hydrogen  2.862  N/A
ASP 18.A N     TYR 22.A O     no hydrogen  2.757  N/A
GLU 20.A N     ASP 18.A OD1   no hydrogen  2.826  N/A
GLY 21.A N     ASP 18.A O     no hydrogen  2.940  N/A
TYR 22.A N     ASP 18.A OD1   no hydrogen  2.843  N/A
THR 24.A N     TYR 16.A O     no hydrogen  2.679  N/A
THR 24.A OG1   TYR 22.A O     no hydrogen  2.796  N/A
ILE 25.A N     HIS 29.A O     no hydrogen  2.933  N/A
GLY 26.A N     ARG 12.A O     no hydrogen  2.768  N/A
GLY 28.A N     TYR 16.A OH    no hydrogen  3.272  N/A
HIS 29.A N     ILE 25.A O     no hydrogen  2.881  N/A
HIS 29.A ND1   ASP 68.A OD2   no hydrogen  2.583  N/A
LEU 31.A N     TYR 23.A O     no hydrogen  2.850  N/A
SER 34.A N     THR 32.A OG1   no hydrogen  3.013  N/A
SER 36.A N     SER 34.A OG    no hydrogen  3.103  N/A
ALA 39.A N     SER 36.A OG    no hydrogen  2.997  N/A
ALA 40.A N     SER 36.A O     no hydrogen  3.101  N/A
LYS 41.A N     LEU 37.A O     no hydrogen  2.817  N/A
SER 42.A N     ASN 38.A O     no hydrogen  2.988  N/A
GLU 43.A N     ALA 39.A O     no hydrogen  3.037  N/A
LEU 44.A N     ALA 40.A O     no hydrogen  2.876  N/A
ASP 45.A N     LYS 41.A O     no hydrogen  2.937  N/A
LYS 46.A N     SER 42.A O     no hydrogen  2.898  N/A
LYS 46.A NZ    GLU 43.A OE1   no hydrogen  2.763  N/A
ALA 47.A N     GLU 43.A O     no hydrogen  2.852  N/A
ILE 48.A N     LEU 44.A O     no hydrogen  2.933  N/A
GLY 49.A N     ASP 45.A O     no hydrogen  2.782  N/A
ARG 50.A NE    GLU 60.A OE2   no hydrogen  2.761  N/A
ARG 50.A NH2   VAL 55.A O     no hydrogen  3.452  N/A
ARG 50.A NH2   GLU 60.A OE1   no hydrogen  2.748  N/A
ARG 50.A NH2   GLU 60.A OE2   no hydrogen  3.336  N/A
THR 52.A N     ASP 45.A OD1   no hydrogen  2.877  N/A
THR 52.A OG1   ASP 45.A OD1   no hydrogen  2.703  N/A
GLY 54.A N     THR 52.A OG1   no hydrogen  3.201  N/A
VAL 55.A N     THR 52.A O     no hydrogen  3.340  N/A
ILE 56.A N     LEU 13.A O     no hydrogen  2.891  N/A
THR 57.A N     GLU 60.A OE1   no hydrogen  3.045  N/A
GLU 60.A N     THR 57.A OG1   no hydrogen  3.170  N/A
ALA 61.A N     THR 57.A O     no hydrogen  2.924  N/A
GLU 62.A N     LYS 58.A O     no hydrogen  2.856  N/A
LYS 63.A N     ASP 59.A O     no hydrogen  2.874  N/A
LEU 64.A N     GLU 60.A O     no hydrogen  3.091  N/A
PHE 65.A N     ALA 61.A O     no hydrogen  2.974  N/A
ASN 66.A N     GLU 62.A O     no hydrogen  2.840  N/A
GLN 67.A N     LYS 63.A O     no hydrogen  3.028  N/A
ASP 68.A N     LEU 64.A O     no hydrogen  2.771  N/A
VAL 69.A N     PHE 65.A O     no hydrogen  2.896  N/A
ASP 70.A N     ASN 66.A O     no hydrogen  3.040  N/A
ALA 71.A N     GLN 67.A O     no hydrogen  2.832  N/A
ALA 72.A N     ASP 68.A O     no hydrogen  2.916  N/A
VAL 73.A N     VAL 69.A O     no hydrogen  3.009  N/A
ARG 74.A N     ASP 70.A O     no hydrogen  2.941  N/A
GLY 75.A N     ALA 71.A O     no hydrogen  2.821  N/A
ILE 76.A N     ALA 72.A O     no hydrogen  3.129  N/A
LEU 77.A N     VAL 73.A O     no hydrogen  3.095  N/A
ARG 78.A N     ARG 74.A O     no hydrogen  2.927  N/A
ASN 79.A N     ILE 76.A O     no hydrogen  3.055  N/A
ASN 79.A ND2   GLU 104.A OE1  no hydrogen  2.999  N/A
LYS 81.A N     ASN 79.A OD1   no hydrogen  2.988  N/A
LEU 82.A N     ASN 79.A OD1   no hydrogen  3.292  N/A
LYS 83.A N     ASN 79.A O     no hydrogen  2.851  N/A
LYS 83.A NZ    ASP 87.A OD2   no hydrogen  2.679  N/A
TYR 86.A N     LEU 82.A O     no hydrogen  2.942  N/A
ASP 87.A N     LYS 83.A O     no hydrogen  2.835  N/A
SER 88.A N     PRO 84.A O     no hydrogen  3.084  N/A
SER 88.A N     VAL 85.A O     no hydrogen  3.158  N/A
SER 88.A OG    VAL 85.A O     no hydrogen  2.612  N/A
LEU 89.A N     TYR 86.A O     no hydrogen  3.008  N/A
ARG 93.A N     ASP 90.A OD2   no hydrogen  2.999  N/A
ARG 93.A NE    PHE 148.A O    no hydrogen  2.694  N/A
ARG 93.A NH1   ASP 90.A OD1   no hydrogen  2.840  N/A
ARG 93.A NH2   PHE 148.A O    no hydrogen  3.493  N/A
ARG 93.A NH2   ARG 149.A O    no hydrogen  3.230  N/A
ARG 94.A N     ASP 90.A O     no hydrogen  2.907  N/A
ARG 94.A NE    TYR 86.A O     no hydrogen  3.083  N/A
ARG 94.A NH2   ASP 87.A O     no hydrogen  2.987  N/A
ALA 95.A N     ALA 91.A O     no hydrogen  3.209  N/A
ALA 96.A N     VAL 92.A O     no hydrogen  3.258  N/A
ALA 97.A N     ARG 93.A O     no hydrogen  2.922  N/A
ILE 98.A N     ARG 94.A O     no hydrogen  2.953  N/A
ASN 99.A N     ALA 95.A O     no hydrogen  2.908  N/A
ASN 99.A ND2   ASP 8.A OD2    no hydrogen  2.774  N/A
PHE 101.A N    ILE 98.A O     no hydrogen  2.777  N/A
GLN 102.A N    ASN 99.A O     no hydrogen  3.016  N/A
GLN 102.A NE2  THR 137.A OG1  no hydrogen  3.201  N/A
VAL 107.A N    GLY 103.A O    no hydrogen  3.086  N/A
ALA 108.A N    GLU 104.A O    no hydrogen  2.959  N/A
PHE 110.A N    VAL 107.A O    no hydrogen  2.830  N/A
THR 111.A OG1  ALA 108.A O    no hydrogen  2.944  N/A
SER 113.A OG   ASN 127.A OD1  no hydrogen  2.476  N/A
LEU 114.A N    PHE 110.A O    no hydrogen  2.876  N/A
ARG 115.A N    THR 111.A O    no hydrogen  3.097  N/A
ARG 115.A NH1  ASN 112.A OD1  no hydrogen  2.983  N/A
GLN 117.A N    LEU 114.A O    no hydrogen  2.890  N/A
GLN 118.A N    ARG 115.A O    no hydrogen  2.975  N/A
GLN 118.A NE2  ARG 115.A O    no hydrogen  3.404  N/A
LYS 119.A N    LEU 116.A O    no hydrogen  2.969  N/A
LYS 119.A NZ   SER 88.A O     no hydrogen  2.712  N/A
ALA 124.A N    ARG 120.A O    no hydrogen  2.790  N/A
ALA 125.A N    TRP 121.A O    no hydrogen  2.963  N/A
VAL 126.A N    ASP 122.A O    no hydrogen  3.005  N/A
ASN 127.A N    GLU 123.A O    no hydrogen  2.889  N/A
LEU 128.A N    ALA 124.A O    no hydrogen  2.779  N/A
ALA 129.A N    ALA 125.A O    no hydrogen  3.323  N/A
LYS 130.A N    ASN 127.A O    no hydrogen  3.131  N/A
SER 131.A OG   LEU 128.A O    no hydrogen  2.743  N/A
ARG 132.A NH1  GLU 20.A OE2   no hydrogen  2.880  N/A
ARG 132.A NH2  GLU 20.A OE1   no hydrogen  2.957  N/A
ARG 132.A NH2  GLU 20.A OE2   no hydrogen  3.212  N/A
TRP 133.A NE1  GLN 102.A OE1  no hydrogen  2.862  N/A
TYR 134.A N    SER 131.A OG   no hydrogen  3.065  N/A
ASN 135.A N    SER 131.A O    no hydrogen  3.200  N/A
GLN 136.A N    ARG 132.A O    no hydrogen  2.803  N/A
THR 137.A N    TRP 133.A O    no hydrogen  2.915  N/A
THR 137.A OG1  TRP 133.A O    no hydrogen  3.035  N/A
ARG 140.A NE   ASN 99.A OD1   no hydrogen  3.090  N/A
ARG 140.A NH1  GLU 9.A OE2    no hydrogen  2.676  N/A
ARG 140.A NH2  GLU 9.A OE2    no hydrogen  2.834  N/A
ARG 140.A NH2  ASN 99.A OD1   no hydrogen  2.824  N/A
ALA 141.A N    THR 137.A O    no hydrogen  2.876  N/A
LYS 142.A N    PRO 138.A O    no hydrogen  2.764  N/A
ARG 143.A N    ASN 139.A O    no hydrogen  3.245  N/A
ARG 143.A NE   ASP 8.A OD1    no hydrogen  2.867  N/A
ARG 143.A NH2  ASP 8.A OD1    no hydrogen  2.844  N/A
VAL 144.A N    ARG 140.A O    no hydrogen  3.013  N/A
ILE 145.A N    ALA 141.A O    no hydrogen  2.740  N/A
THR 146.A N    LYS 142.A O    no hydrogen  2.897  N/A
THR 146.A OG1  LYS 142.A O    no hydrogen  3.048  N/A
THR 147.A N    ARG 143.A O    no hydrogen  3.074  N/A
THR 147.A OG1  ARG 143.A O    no hydrogen  2.752  N/A
PHE 148.A N    VAL 144.A O    no hydrogen  2.966  N/A
ARG 149.A N    ILE 145.A O    no hydrogen  2.741  N/A
THR 150.A N    THR 146.A O    no hydrogen  2.894  N/A
THR 150.A OG1  THR 146.A O    no hydrogen  2.770  N/A
THR 150.A OG1  THR 152.A OG1  no hydrogen  2.779  N/A
GLY 151.A N    THR 147.A O    no hydrogen  2.833  N/A
THR 152.A N    THR 150.A OG1  no hydrogen  3.127  N/A
THR 152.A OG1  THR 150.A OG1  no hydrogen  2.779  N/A
ASP 154.A N    THR 152.A OG1  no hydrogen  3.275  N/A
TYR 156.A N    TRP 153.A O    no hydrogen  2.849  N/A
TYR 156.A OH   ASP 8.A OD2    no hydrogen  2.557  N/A
LYS 157.A N    TRP 153.A O    no hydrogen  2.871  N/A