Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 3ly3_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
LYS 6.A N      ASP 2.A O      no hydrogen  2.989  N/A
LYS 6.A NZ     ASP 3.A OD1    no hydrogen  2.421  N/A
LEU 7.A N      ASP 3.A O      no hydrogen  2.883  N/A
GLU 8.A N      PHE 4.A O      no hydrogen  3.006  N/A
GLU 9.A N      ALA 5.A O      no hydrogen  2.773  N/A
GLN 10.A N     LYS 6.A O      no hydrogen  2.742  N/A
PHE 11.A N     LEU 7.A O      no hydrogen  2.835  N/A
ASP 12.A N     GLU 9.A O      no hydrogen  3.323  N/A
ALA 13.A N     GLU 8.A O      no hydrogen  3.200  N/A
LYS 14.A N     SER 232.A O    no hydrogen  2.714  N/A
LYS 14.A NZ    GLU 34.A OE2   no hydrogen  3.018  N/A
LEU 15.A N     GLU 8.A OE2    no hydrogen  2.934  N/A
GLY 16.A N     LEU 230.A O    no hydrogen  2.755  N/A
ILE 17.A N     TYR 30.A O     no hydrogen  2.803  N/A
PHE 18.A N     ALA 228.A O    no hydrogen  3.182  N/A
ALA 19.A N     VAL 28.A O     no hydrogen  2.794  N/A
LEU 20.A N     VAL 226.A O    no hydrogen  2.844  N/A
ASP 21.A N     ARG 26.A O     no hydrogen  2.760  N/A
THR 22.A N     PRO 224.A O    no hydrogen  2.989  N/A
THR 22.A OG1   PRO 224.A O    no hydrogen  2.682  N/A
GLY 23.A N     ASP 21.A OD1   no hydrogen  2.833  N/A
THR 24.A N     ASP 21.A OD1   no hydrogen  3.447  N/A
ASN 25.A N     ASP 21.A O     no hydrogen  2.712  N/A
ARG 26.A N     THR 24.A OG1   no hydrogen  3.233  N/A
VAL 28.A N     ALA 19.A O     no hydrogen  2.923  N/A
TYR 30.A N     ILE 17.A O     no hydrogen  3.015  N/A
TYR 30.A OH    GLU 8.A OE1    no hydrogen  2.470  N/A
ARG 31.A NE    GLU 8.A OE2    no hydrogen  2.862  N/A
ARG 31.A NH2   GLU 8.A OE1    no hydrogen  3.051  N/A
ARG 31.A NH2   GLU 8.A OE2    no hydrogen  3.487  N/A
GLU 34.A N     ARG 31.A O     no hydrogen  3.160  N/A
ARG 35.A NH1   VAL 127.A O    no hydrogen  2.897  N/A
ARG 35.A NH1   THR 148.A OG1  no hydrogen  2.833  N/A
ARG 35.A NH2   VAL 127.A O    no hydrogen  3.120  N/A
PHE 36.A N     SER 149.A O    no hydrogen  2.952  N/A
PHE 38.A N     ASP 147.A O    no hydrogen  3.039  N/A
SER 40.A OG    SER 98.A OG    no hydrogen  3.341  N/A
THR 41.A N     PHE 38.A O     no hydrogen  3.361  N/A
THR 41.A OG1   PHE 38.A O     no hydrogen  2.738  N/A
ILE 42.A N     ALA 39.A O     no hydrogen  3.168  N/A
LYS 43.A N     SER 40.A O     no hydrogen  2.900  N/A
LYS 43.A NZ    SER 40.A OG    no hydrogen  2.837  N/A
LYS 43.A NZ    ASN 100.A OD1  no hydrogen  3.045  N/A
ALA 44.A N     THR 41.A O     no hydrogen  3.195  N/A
THR 46.A N     ILE 42.A O     no hydrogen  2.916  N/A
THR 46.A OG1   ILE 42.A O     no hydrogen  2.805  N/A
VAL 47.A N     LYS 43.A O     no hydrogen  3.154  N/A
GLY 48.A N     ALA 44.A O     no hydrogen  3.133  N/A
VAL 49.A N     LEU 45.A O     no hydrogen  3.089  N/A
LEU 50.A N     THR 46.A O     no hydrogen  2.938  N/A
LEU 51.A N     VAL 47.A O     no hydrogen  2.832  N/A
GLN 52.A N     GLY 48.A O     no hydrogen  2.969  N/A
GLN 53.A N     VAL 49.A O     no hydrogen  3.011  N/A
GLN 53.A N     LEU 50.A O     no hydrogen  3.099  N/A
LYS 54.A N     LEU 50.A O     no hydrogen  3.245  N/A
LYS 54.A NZ    GLN 109.A OE1  no hydrogen  3.448  N/A
SER 55.A N     ASP 58.A OD2   no hydrogen  3.100  N/A
ASP 58.A N     SER 55.A OG    no hydrogen  2.957  N/A
LEU 59.A N     ILE 56.A O     no hydrogen  3.018  N/A
ASN 60.A N     GLU 57.A O     no hydrogen  3.036  N/A
GLN 61.A N     ASP 58.A O     no hydrogen  3.224  N/A
ARG 62.A NH1   THR 83.A O     no hydrogen  3.365  N/A
ILE 63.A N     MET 85.A O     no hydrogen  2.814  N/A
TYR 65.A OH    THR 77.A O     no hydrogen  2.657  N/A
THR 66.A N     ASP 69.A OD2   no hydrogen  2.923  N/A
ASP 68.A N     THR 66.A OG1   no hydrogen  2.958  N/A
ASP 69.A N     THR 66.A O     no hydrogen  2.988  N/A
LEU 70.A N     ARG 67.A O     no hydrogen  3.280  N/A
ASN 74.A ND2   VAL 71.A O     no hydrogen  3.050  N/A
ASN 74.A ND2   ASN 72.A O     no hydrogen  3.519  N/A
ILE 76.A N     ASP 99.A OD2   no hydrogen  2.849  N/A
THR 77.A N     ASP 99.A OD2   no hydrogen  2.954  N/A
GLU 78.A N     ASN 74.A O     no hydrogen  3.109  N/A
LYS 79.A N     ILE 76.A O     no hydrogen  2.929  N/A
HIS 80.A N     THR 77.A O     no hydrogen  3.152  N/A
THR 83.A OG1   HIS 80.A O     no hydrogen  3.553  N/A
THR 83.A OG1   GLY 84.A O     no hydrogen  2.833  N/A
GLY 84.A N     HIS 80.A O     no hydrogen  2.715  N/A
MET 85.A N     ILE 63.A O     no hydrogen  2.995  N/A
THR 86.A N     GLU 89.A OE1   no hydrogen  2.935  N/A
LEU 87.A N     GLN 61.A O     no hydrogen  3.077  N/A
LYS 88.A N     LEU 59.A O     no hydrogen  2.879  N/A
GLU 89.A N     THR 86.A OG1   no hydrogen  3.138  N/A
LEU 90.A N     THR 86.A O     no hydrogen  2.803  N/A
ALA 91.A N     LEU 87.A O     no hydrogen  2.913  N/A
ASP 92.A N     LYS 88.A O     no hydrogen  3.025  N/A
ALA 93.A N     GLU 89.A O     no hydrogen  3.051  N/A
SER 94.A N     LEU 90.A O     no hydrogen  2.849  N/A
LEU 95.A N     ALA 91.A O     no hydrogen  2.920  N/A
ARG 96.A N     ASP 92.A O     no hydrogen  2.851  N/A
ARG 96.A NE    ASP 92.A OD1   no hydrogen  2.838  N/A
ARG 96.A NE    ASP 92.A OD2   no hydrogen  3.393  N/A
ARG 96.A NH1   ARG 181.A O    no hydrogen  3.236  N/A
ARG 96.A NH2   ASP 92.A OD1   no hydrogen  2.935  N/A
TYR 97.A N     ALA 93.A O     no hydrogen  2.992  N/A
ASP 99.A N     ALA 93.A O     no hydrogen  3.208  N/A
ALA 101.A N    ASN 74.A OD1   no hydrogen  2.856  N/A
ALA 102.A N    ASP 99.A OD1   no hydrogen  2.839  N/A
GLN 103.A N    ASP 99.A O     no hydrogen  3.000  N/A
GLN 103.A NE2  THR 46.A OG1   no hydrogen  2.970  N/A
ASN 104.A N    ASN 100.A O    no hydrogen  2.962  N/A
LEU 105.A N    ALA 101.A O    no hydrogen  3.045  N/A
ILE 106.A N    ALA 102.A O    no hydrogen  3.040  N/A
LEU 107.A N    GLN 103.A O    no hydrogen  2.869  N/A
LYS 108.A N    ASN 104.A O    no hydrogen  2.961  N/A
GLN 109.A N    LEU 105.A O    no hydrogen  3.036  N/A
ILE 110.A N    ILE 106.A O    no hydrogen  3.083  N/A
GLY 111.A N    LYS 108.A O    no hydrogen  3.123  N/A
GLY 112.A N    LEU 107.A O    no hydrogen  2.699  N/A
GLU 114.A N    GLU 114.A OE1  no hydrogen  2.884  N/A
SER 115.A OG   ILE 110.A O    no hydrogen  2.595  N/A
LEU 116.A N    GLY 112.A O    no hydrogen  3.025  N/A
LYS 117.A N    PRO 113.A O    no hydrogen  2.919  N/A
LYS 117.A NZ   GLU 131.A OE1  no hydrogen  2.935  N/A
LYS 118.A N    GLU 114.A O    no hydrogen  3.049  N/A
GLU 119.A N    SER 115.A O    no hydrogen  3.029  N/A
LEU 120.A N    LEU 116.A O    no hydrogen  2.955  N/A
ARG 121.A N    LYS 117.A O    no hydrogen  2.734  N/A
ARG 121.A NH1  ASP 125.A O    no hydrogen  2.856  N/A
ARG 121.A NH1  THR 128.A O    no hydrogen  2.793  N/A
ARG 121.A NH2  THR 128.A O    no hydrogen  3.341  N/A
ARG 121.A NH2  ASN 129.A OD1  no hydrogen  2.864  N/A
LYS 122.A N    LYS 118.A O    no hydrogen  2.915  N/A
LYS 122.A NZ   GLU 119.A OE1  no hydrogen  2.820  N/A
LYS 122.A NZ   GLU 119.A OE2  no hydrogen  3.479  N/A
ILE 123.A N    GLU 119.A O    no hydrogen  3.244  N/A
ILE 123.A N    LEU 120.A O    no hydrogen  2.947  N/A
GLY 124.A N    ARG 121.A O    no hydrogen  3.147  N/A
ASP 125.A N    LEU 120.A O    no hydrogen  2.973  N/A
VAL 127.A N    ASP 125.A OD1  no hydrogen  2.864  N/A
THR 128.A N    ASP 125.A OD1  no hydrogen  2.737  N/A
THR 128.A OG1  ASP 125.A OD1  no hydrogen  3.348  N/A
THR 128.A OG1  ASP 125.A OD2  no hydrogen  2.598  N/A
THR 128.A OG1  SER 149.A OG   no hydrogen  2.519  N/A
ASN 129.A N    THR 148.A O    no hydrogen  2.904  N/A
ASN 129.A ND2  GLU 131.A OE1  no hydrogen  3.312  N/A
GLU 131.A N    ASP 147.A OD1  no hydrogen  2.720  N/A
ARG 132.A N    ASP 147.A OD1  no hydrogen  3.110  N/A
ARG 132.A NE   ASP 147.A OD2  no hydrogen  2.736  N/A
ARG 132.A NH2  GLU 144.A OE1  no hydrogen  3.366  N/A
ARG 132.A NH2  ASP 147.A OD2  no hydrogen  2.683  N/A
LEU 137.A N    CYS 134.A O    no hydrogen  2.984  N/A
ASN 138.A N    PRO 135.A O    no hydrogen  2.844  N/A
VAL 140.A N    ASN 138.A O    no hydrogen  2.940  N/A
ASN 141.A N    GLU 144.A OE2  no hydrogen  3.084  N/A
ASN 141.A ND2  GLU 139.A O    no hydrogen  3.007  N/A
GLU 144.A N    ASN 141.A O    no hydrogen  3.284  N/A
ASP 147.A N    ASN 129.A O    no hydrogen  2.784  N/A
THR 148.A N    THR 145.A O    no hydrogen  3.289  N/A
THR 148.A OG1  THR 145.A O    no hydrogen  2.553  N/A
SER 149.A N    PHE 36.A O     no hydrogen  3.035  N/A
SER 149.A OG   THR 128.A OG1  no hydrogen  2.519  N/A
THR 150.A OG1  PRO 32.A O     no hydrogen  3.520  N/A
ARG 152.A N    PRO 32.A O     no hydrogen  3.074  N/A
ARG 152.A NE   ASP 33.A OD1   no hydrogen  2.793  N/A
ARG 152.A NH2  ASP 33.A OD2   no hydrogen  2.849  N/A
ALA 153.A N    THR 150.A OG1  no hydrogen  3.018  N/A
LEU 154.A N    THR 150.A O    no hydrogen  2.980  N/A
VAL 155.A N    ALA 151.A O    no hydrogen  3.010  N/A
THR 156.A N    ARG 152.A O    no hydrogen  3.073  N/A
THR 156.A OG1  ARG 152.A O    no hydrogen  2.657  N/A
SER 157.A N    ALA 153.A O    no hydrogen  2.906  N/A
SER 157.A OG   ASP 125.A OD2  no hydrogen  2.779  N/A
SER 157.A OG   ALA 153.A O    no hydrogen  3.437  N/A
LEU 158.A N    LEU 154.A O    no hydrogen  2.898  N/A
ARG 159.A N    VAL 155.A O    no hydrogen  2.807  N/A
ALA 160.A N    THR 156.A O    no hydrogen  2.951  N/A
PHE 161.A N    SER 157.A O    no hydrogen  3.161  N/A
ALA 162.A N    LEU 158.A O    no hydrogen  2.832  N/A
LEU 163.A N    ARG 159.A O    no hydrogen  2.834  N/A
GLU 164.A N    ARG 159.A O    no hydrogen  3.004  N/A
LYS 166.A N    ALA 160.A O    no hydrogen  3.323  N/A
LYS 171.A N    PRO 168.A O    no hydrogen  3.161  N/A
LYS 171.A NZ   LEU 51.A O     no hydrogen  3.103  N/A
LYS 171.A NZ   LYS 54.A O     no hydrogen  2.760  N/A
ARG 172.A N    PRO 168.A O    no hydrogen  3.014  N/A
ARG 172.A NH2  LEU 167.A O    no hydrogen  2.876  N/A
GLU 173.A N    SER 169.A O    no hydrogen  2.993  N/A
LEU 174.A N    GLU 170.A O    no hydrogen  3.294  N/A
LEU 175.A N    LYS 171.A O    no hydrogen  3.139  N/A
ILE 176.A N    ARG 172.A O    no hydrogen  2.879  N/A
ASP 177.A N    GLU 173.A O    no hydrogen  2.946  N/A
TRP 178.A N    LEU 174.A O    no hydrogen  2.995  N/A
MET 179.A N    LEU 175.A O    no hydrogen  3.108  N/A
LYS 180.A N    ILE 176.A O    no hydrogen  2.833  N/A
LYS 180.A NZ   GLU 198.A OE1  no hydrogen  3.346  N/A
LYS 180.A NZ   GLU 198.A OE2  no hydrogen  3.337  N/A
ARG 181.A N    ASP 177.A O    no hydrogen  3.117  N/A
ARG 181.A N    TRP 178.A O    no hydrogen  3.125  N/A
ARG 181.A NE   ASP 177.A OD1  no hydrogen  3.107  N/A
ARG 181.A NE   ASP 177.A OD2  no hydrogen  2.995  N/A
ARG 181.A NH2  ASP 92.A OD2   no hydrogen  3.494  N/A
ARG 181.A NH2  ASP 177.A OD2  no hydrogen  3.106  N/A
ASN 182.A N    MET 179.A O    no hydrogen  3.230  N/A
ASN 182.A ND2  THR 184.A OG1  no hydrogen  3.044  N/A
ASN 182.A ND2  ASP 201.A OD1  no hydrogen  3.062  N/A
ASN 182.A ND2  ASP 201.A OD2  no hydrogen  3.380  N/A
THR 183.A N    ARG 96.A O     no hydrogen  2.991  N/A
THR 183.A OG1  ARG 96.A O     no hydrogen  2.659  N/A
THR 184.A N    ASN 182.A OD1  no hydrogen  3.171  N/A
THR 184.A OG1  ASN 182.A OD1  no hydrogen  3.126  N/A
THR 184.A OG1  THR 203.A OG1  no hydrogen  2.726  N/A
LEU 188.A N    GLY 185.A O    no hydrogen  3.165  N/A
ILE 189.A N    ASP 213.A OD2  no hydrogen  3.094  N/A
ARG 190.A NE   ASP 201.A OD1  no hydrogen  2.907  N/A
ARG 190.A NH1  LYS 180.A O    no hydrogen  3.418  N/A
ARG 190.A NH2  LYS 180.A O    no hydrogen  2.992  N/A
ARG 190.A NH2  ASP 201.A OD1  no hydrogen  3.057  N/A
ALA 191.A N    LEU 188.A O    no hydrogen  3.040  N/A
GLY 192.A N    ILE 189.A O    no hydrogen  2.906  N/A
ALA 200.A N    ILE 216.A O    no hydrogen  2.794  N/A
ASP 201.A N    MET 179.A O    no hydrogen  3.078  N/A
LYS 202.A N    ILE 214.A O    no hydrogen  2.915  N/A
LYS 202.A NZ   SER 98.A OG    no hydrogen  2.899  N/A
LYS 202.A NZ   THR 203.A O    no hydrogen  2.833  N/A
THR 203.A OG1  THR 184.A OG1  no hydrogen  2.726  N/A
GLY 204.A N    ASN 212.A O    no hydrogen  2.854  N/A
ALA 206.A N    THR 210.A O    no hydrogen  3.158  N/A
TYR 208.A N    LYS 236.A O    no hydrogen  2.738  N/A
TYR 208.A OH   ASN 141.A OD1  no hydrogen  2.724  N/A
THR 210.A N    ALA 206.A O    no hydrogen  2.999  N/A
THR 210.A N    SER 207.A O    no hydrogen  2.928  N/A
THR 210.A OG1  SER 207.A O    no hydrogen  2.750  N/A
ARG 211.A N    SER 231.A O    no hydrogen  3.060  N/A
ARG 211.A NE   ASP 242.A OD1  no hydrogen  2.933  N/A
ARG 211.A NH1  GLY 204.A O    no hydrogen  3.248  N/A
ARG 211.A NH2  ASP 242.A OD1  no hydrogen  3.214  N/A
ASN 212.A N    GLY 204.A O    no hydrogen  2.875  N/A
ASN 212.A ND2  ALA 37.A O     no hydrogen  2.849  N/A
ASN 212.A ND2  PHE 38.A O     no hydrogen  3.181  N/A
ASP 213.A N    VAL 229.A O    no hydrogen  2.985  N/A
ILE 214.A N    LYS 202.A O    no hydrogen  3.009  N/A
ALA 215.A N    LEU 227.A O    no hydrogen  2.825  N/A
ILE 216.A N    ALA 200.A O    no hydrogen  2.832  N/A
ILE 217.A N    VAL 225.A O    no hydrogen  2.850  N/A
TRP 218.A N    GLU 198.A O    no hydrogen  2.898  N/A
VAL 225.A N    ILE 217.A O    no hydrogen  2.810  N/A
VAL 226.A N    LEU 20.A O     no hydrogen  2.927  N/A
LEU 227.A N    ALA 215.A O    no hydrogen  2.906  N/A
ALA 228.A N    PHE 18.A O     no hydrogen  2.829  N/A
VAL 229.A N    ASP 213.A O    no hydrogen  2.912  N/A
LEU 230.A N    GLY 16.A O     no hydrogen  2.736  N/A
SER 231.A N    ASN 212.A OD1  no hydrogen  3.322  N/A
SER 231.A OG   ARG 211.A O    no hydrogen  2.758  N/A
SER 232.A N    LYS 14.A O     no hydrogen  2.999  N/A
ARG 233.A N    TYR 208.A O    no hydrogen  2.871  N/A
ARG 233.A NE   ASP 12.A O     no hydrogen  2.875  N/A
ARG 233.A NH1  LYS 239.A O    no hydrogen  3.021  N/A
ARG 233.A NH2  ASP 12.A O     no hydrogen  3.409  N/A
ARG 233.A NH2  ASP 12.A OD2   no hydrogen  2.959  N/A
ALA 238.A N    LYS 235.A O    no hydrogen  2.832  N/A
LYS 243.A N    ASP 241.A OD1  no hydrogen  3.078  N/A
LEU 244.A N    ASP 241.A O    no hydrogen  3.007  N/A
ALA 246.A N    ASP 242.A O    no hydrogen  3.179  N/A
GLU 247.A N    LYS 243.A O    no hydrogen  2.854  N/A
ALA 248.A N    LEU 244.A O    no hydrogen  2.846  N/A
THR 249.A N    ILE 245.A O    no hydrogen  3.025  N/A
THR 249.A OG1  ILE 245.A O    no hydrogen  2.954  N/A
LYS 250.A N    ALA 246.A O    no hydrogen  3.105  N/A
LYS 250.A NZ   GLU 247.A OE2  no hydrogen  3.422  N/A
VAL 251.A N    GLU 247.A O    no hydrogen  3.237  N/A
VAL 252.A N    ALA 248.A O    no hydrogen  3.126  N/A
MET 253.A N    THR 249.A O    no hydrogen  2.926  N/A
LYS 254.A N    LYS 250.A O    no hydrogen  2.985  N/A
ALA 255.A N    VAL 251.A O    no hydrogen  2.954  N/A
LEU 256.A N    VAL 252.A O    no hydrogen  2.815  N/A
ASN 257.A N    LYS 254.A O    no hydrogen  2.808  N/A
MET 258.A N    MET 253.A O    no hydrogen  2.585  N/A