Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 3ly4_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
ALA 5.A N      LYS 1.A O      no hydrogen  3.260  N/A
LYS 6.A N      ASP 2.A O      no hydrogen  2.789  N/A
LYS 6.A NZ     ASP 3.A OD1    no hydrogen  2.415  N/A
LEU 7.A N      ASP 3.A O      no hydrogen  3.029  N/A
GLU 8.A N      PHE 4.A O      no hydrogen  2.968  N/A
GLU 9.A N      ALA 5.A O      no hydrogen  2.766  N/A
GLN 10.A N     LYS 6.A O      no hydrogen  2.633  N/A
PHE 11.A N     LEU 7.A O      no hydrogen  2.932  N/A
ASP 12.A N     GLU 9.A O      no hydrogen  3.343  N/A
ALA 13.A N     GLU 8.A O      no hydrogen  3.284  N/A
LYS 14.A N     SER 232.A O    no hydrogen  2.707  N/A
LYS 14.A NZ    GLU 34.A OE2   no hydrogen  2.966  N/A
LEU 15.A N     GLU 8.A OE2    no hydrogen  2.947  N/A
GLY 16.A N     LEU 230.A O    no hydrogen  2.738  N/A
ILE 17.A N     TYR 30.A O     no hydrogen  2.737  N/A
PHE 18.A N     ALA 228.A O    no hydrogen  3.111  N/A
ALA 19.A N     VAL 28.A O     no hydrogen  2.888  N/A
LEU 20.A N     VAL 226.A O    no hydrogen  2.766  N/A
ASP 21.A N     ARG 26.A O     no hydrogen  2.715  N/A
THR 22.A N     PRO 224.A O    no hydrogen  3.018  N/A
THR 22.A OG1   PRO 224.A O    no hydrogen  2.852  N/A
GLY 23.A N     ASP 21.A OD1   no hydrogen  2.912  N/A
THR 24.A N     ASP 21.A OD1   no hydrogen  3.393  N/A
ARG 26.A N     THR 24.A OG1   no hydrogen  3.177  N/A
VAL 28.A N     ALA 19.A O     no hydrogen  3.096  N/A
TYR 30.A N     ILE 17.A O     no hydrogen  2.919  N/A
TYR 30.A OH    GLU 8.A OE1    no hydrogen  2.534  N/A
ARG 31.A NE    GLU 8.A OE2    no hydrogen  2.937  N/A
ARG 31.A NH2   GLU 8.A OE1    no hydrogen  3.077  N/A
GLU 34.A N     ARG 31.A O     no hydrogen  3.318  N/A
ARG 35.A NH1   VAL 127.A O    no hydrogen  2.878  N/A
ARG 35.A NH1   THR 148.A OG1  no hydrogen  2.887  N/A
ARG 35.A NH2   VAL 127.A O    no hydrogen  3.014  N/A
PHE 36.A N     SER 149.A O    no hydrogen  2.986  N/A
PHE 38.A N     ASP 147.A O    no hydrogen  3.055  N/A
SER 40.A OG    SER 98.A OG    no hydrogen  3.149  N/A
THR 41.A N     PHE 38.A O     no hydrogen  3.343  N/A
THR 41.A OG1   PHE 38.A O     no hydrogen  2.777  N/A
ILE 42.A N     ALA 39.A O     no hydrogen  3.352  N/A
LYS 43.A N     SER 40.A O     no hydrogen  3.104  N/A
LYS 43.A NZ    SER 40.A OG    no hydrogen  3.196  N/A
LYS 43.A NZ    SER 98.A OG    no hydrogen  2.700  N/A
LYS 43.A NZ    ASN 100.A OD1  no hydrogen  2.793  N/A
ALA 44.A N     THR 41.A O     no hydrogen  3.113  N/A
THR 46.A N     ILE 42.A O     no hydrogen  2.841  N/A
THR 46.A OG1   ILE 42.A O     no hydrogen  2.804  N/A
VAL 47.A N     LYS 43.A O     no hydrogen  3.096  N/A
GLY 48.A N     ALA 44.A O     no hydrogen  3.119  N/A
VAL 49.A N     LEU 45.A O     no hydrogen  3.032  N/A
LEU 50.A N     THR 46.A O     no hydrogen  2.946  N/A
LEU 51.A N     VAL 47.A O     no hydrogen  2.871  N/A
GLN 52.A N     GLY 48.A O     no hydrogen  3.000  N/A
GLN 53.A N     VAL 49.A O     no hydrogen  3.124  N/A
GLN 53.A N     LEU 50.A O     no hydrogen  2.993  N/A
SER 55.A N     ASP 58.A OD2   no hydrogen  2.977  N/A
ASP 58.A N     SER 55.A OG    no hydrogen  2.922  N/A
LEU 59.A N     ILE 56.A O     no hydrogen  3.040  N/A
ASN 60.A N     GLU 57.A O     no hydrogen  3.037  N/A
ASN 60.A ND2   GLU 57.A OE2   no hydrogen  3.389  N/A
GLN 61.A N     ASP 58.A O     no hydrogen  3.102  N/A
ARG 62.A NH1   THR 83.A O     no hydrogen  3.394  N/A
ILE 63.A N     MET 85.A O     no hydrogen  2.734  N/A
TYR 65.A OH    THR 77.A O     no hydrogen  2.669  N/A
THR 66.A N     ASP 69.A OD2   no hydrogen  3.007  N/A
ASP 68.A N     THR 66.A OG1   no hydrogen  3.072  N/A
ASP 69.A N     THR 66.A O     no hydrogen  3.031  N/A
LEU 70.A N     ARG 67.A O     no hydrogen  3.126  N/A
ILE 76.A N     ASP 99.A OD2   no hydrogen  2.834  N/A
THR 77.A N     ASP 99.A OD2   no hydrogen  2.823  N/A
GLU 78.A N     ASN 74.A O     no hydrogen  3.057  N/A
LYS 79.A N     ILE 76.A O     no hydrogen  2.942  N/A
HIS 80.A N     THR 77.A O     no hydrogen  3.373  N/A
THR 83.A N     HIS 80.A O     no hydrogen  3.216  N/A
THR 83.A OG1   HIS 80.A O     no hydrogen  3.550  N/A
THR 83.A OG1   GLY 84.A O     no hydrogen  2.822  N/A
GLY 84.A N     HIS 80.A O     no hydrogen  2.739  N/A
MET 85.A N     ILE 63.A O     no hydrogen  3.017  N/A
THR 86.A N     GLU 89.A OE1   no hydrogen  3.050  N/A
LEU 87.A N     GLN 61.A O     no hydrogen  2.983  N/A
LYS 88.A N     LEU 59.A O     no hydrogen  2.880  N/A
GLU 89.A N     THR 86.A OG1   no hydrogen  3.168  N/A
LEU 90.A N     THR 86.A O     no hydrogen  2.829  N/A
ALA 91.A N     LEU 87.A O     no hydrogen  2.840  N/A
ASP 92.A N     LYS 88.A O     no hydrogen  3.111  N/A
ALA 93.A N     GLU 89.A O     no hydrogen  3.018  N/A
SER 94.A N     LEU 90.A O     no hydrogen  2.853  N/A
LEU 95.A N     ALA 91.A O     no hydrogen  2.931  N/A
ARG 96.A N     ASP 92.A O     no hydrogen  2.813  N/A
ARG 96.A NE    ASP 92.A OD1   no hydrogen  2.845  N/A
ARG 96.A NE    ASP 92.A OD2   no hydrogen  3.528  N/A
ARG 96.A NH1   ARG 181.A O    no hydrogen  3.076  N/A
ARG 96.A NH2   ASP 92.A OD1   no hydrogen  3.092  N/A
TYR 97.A N     ALA 93.A O     no hydrogen  2.918  N/A
ASP 99.A N     ALA 93.A O     no hydrogen  3.284  N/A
ASN 100.A N    TYR 73.A O     no hydrogen  3.106  N/A
ALA 101.A N    ASN 74.A OD1   no hydrogen  3.064  N/A
ALA 102.A N    ASP 99.A OD1   no hydrogen  2.917  N/A
GLN 103.A N    ASP 99.A O     no hydrogen  3.115  N/A
GLN 103.A NE2  THR 46.A OG1   no hydrogen  2.957  N/A
ASN 104.A N    ASN 100.A O    no hydrogen  2.976  N/A
LEU 105.A N    ALA 101.A O    no hydrogen  2.944  N/A
ILE 106.A N    ALA 102.A O    no hydrogen  2.939  N/A
LEU 107.A N    GLN 103.A O    no hydrogen  2.850  N/A
LYS 108.A N    ASN 104.A O    no hydrogen  3.038  N/A
GLN 109.A N    LEU 105.A O    no hydrogen  3.142  N/A
ILE 110.A N    ILE 106.A O    no hydrogen  2.985  N/A
GLY 111.A N    LYS 108.A O    no hydrogen  2.849  N/A
GLY 112.A N    LEU 107.A O    no hydrogen  2.558  N/A
SER 115.A OG   ILE 110.A O    no hydrogen  2.563  N/A
LEU 116.A N    GLY 112.A O    no hydrogen  3.070  N/A
LYS 117.A N    PRO 113.A O    no hydrogen  2.935  N/A
LYS 117.A NZ   GLU 131.A OE1  no hydrogen  3.196  N/A
LYS 118.A N    GLU 114.A O    no hydrogen  3.000  N/A
GLU 119.A N    SER 115.A O    no hydrogen  2.910  N/A
LEU 120.A N    LEU 116.A O    no hydrogen  3.006  N/A
ARG 121.A N    LYS 117.A O    no hydrogen  2.859  N/A
ARG 121.A NH1  ASP 125.A O    no hydrogen  2.746  N/A
ARG 121.A NH1  THR 128.A O    no hydrogen  2.879  N/A
ARG 121.A NH2  THR 128.A O    no hydrogen  3.336  N/A
ARG 121.A NH2  ASN 129.A OD1  no hydrogen  2.853  N/A
LYS 122.A N    LYS 118.A O    no hydrogen  3.061  N/A
LYS 122.A NZ   GLU 119.A OE1  no hydrogen  3.055  N/A
ILE 123.A N    GLU 119.A O    no hydrogen  3.124  N/A
GLY 124.A N    ARG 121.A O    no hydrogen  3.012  N/A
ASP 125.A N    LEU 120.A O    no hydrogen  2.897  N/A
VAL 127.A N    ASP 125.A OD1  no hydrogen  2.798  N/A
THR 128.A N    ASP 125.A OD1  no hydrogen  2.831  N/A
THR 128.A OG1  ASP 125.A OD1  no hydrogen  3.384  N/A
THR 128.A OG1  ASP 125.A OD2  no hydrogen  2.555  N/A
THR 128.A OG1  SER 149.A OG   no hydrogen  2.682  N/A
ASN 129.A N    THR 148.A O    no hydrogen  2.922  N/A
ASN 129.A ND2  THR 145.A O    no hydrogen  3.221  N/A
GLU 131.A N    ASP 147.A OD1  no hydrogen  2.854  N/A
ARG 132.A N    ASP 147.A OD1  no hydrogen  3.229  N/A
GLU 136.A N    GLU 136.A OE2  no hydrogen  3.106  N/A
LEU 137.A N    CYS 134.A O    no hydrogen  2.647  N/A
ASN 138.A N    PRO 135.A O    no hydrogen  3.035  N/A
ASN 141.A N    GLU 144.A OE1  no hydrogen  3.095  N/A
ASN 141.A ND2  GLU 144.A OE2  no hydrogen  3.185  N/A
GLU 144.A N    ASN 141.A O    no hydrogen  2.819  N/A
GLN 146.A N    GLN 146.A OE1  no hydrogen  3.057  N/A
GLN 146.A NE2  GLU 144.A OE1  no hydrogen  2.646  N/A
ASP 147.A N    ASN 129.A O    no hydrogen  2.740  N/A
THR 148.A OG1  THR 145.A O    no hydrogen  2.751  N/A
SER 149.A N    PHE 36.A O     no hydrogen  3.032  N/A
SER 149.A OG   THR 128.A OG1  no hydrogen  2.682  N/A
THR 150.A N    SER 149.A OG   no hydrogen  2.731  N/A
THR 150.A OG1  PRO 32.A O     no hydrogen  3.475  N/A
ARG 152.A N    PRO 32.A O     no hydrogen  3.110  N/A
ARG 152.A NE   ASP 33.A OD1   no hydrogen  2.893  N/A
ARG 152.A NH2  ASP 33.A OD2   no hydrogen  2.989  N/A
ALA 153.A N    THR 150.A OG1  no hydrogen  3.087  N/A
LEU 154.A N    THR 150.A O    no hydrogen  2.934  N/A
VAL 155.A N    ALA 151.A O    no hydrogen  2.926  N/A
THR 156.A N    ARG 152.A O    no hydrogen  3.103  N/A
THR 156.A OG1  ARG 152.A O    no hydrogen  2.656  N/A
SER 157.A N    ALA 153.A O    no hydrogen  2.883  N/A
SER 157.A OG   ASP 125.A OD2  no hydrogen  2.749  N/A
SER 157.A OG   ALA 153.A O    no hydrogen  3.390  N/A
LEU 158.A N    LEU 154.A O    no hydrogen  2.966  N/A
ARG 159.A N    VAL 155.A O    no hydrogen  2.862  N/A
ALA 160.A N    THR 156.A O    no hydrogen  3.006  N/A
PHE 161.A N    SER 157.A O    no hydrogen  3.204  N/A
ALA 162.A N    LEU 158.A O    no hydrogen  2.890  N/A
LEU 163.A N    ARG 159.A O    no hydrogen  2.803  N/A
GLU 164.A N    ARG 159.A O    no hydrogen  3.080  N/A
GLU 164.A N    ALA 160.A O    no hydrogen  3.344  N/A
LYS 166.A N    ALA 160.A O    no hydrogen  3.431  N/A
LYS 171.A NZ   LEU 51.A O     no hydrogen  3.021  N/A
LYS 171.A NZ   LYS 54.A O     no hydrogen  2.792  N/A
ARG 172.A N    PRO 168.A O    no hydrogen  3.024  N/A
ARG 172.A NH2  LEU 167.A O    no hydrogen  2.785  N/A
GLU 173.A N    SER 169.A O    no hydrogen  2.972  N/A
LEU 174.A N    GLU 170.A O    no hydrogen  3.291  N/A
LEU 175.A N    LYS 171.A O    no hydrogen  3.181  N/A
ILE 176.A N    ARG 172.A O    no hydrogen  3.015  N/A
ASP 177.A N    GLU 173.A O    no hydrogen  2.950  N/A
TRP 178.A N    LEU 174.A O    no hydrogen  3.035  N/A
MET 179.A N    LEU 175.A O    no hydrogen  2.998  N/A
LYS 180.A N    ILE 176.A O    no hydrogen  2.831  N/A
LYS 180.A NZ   GLU 198.A OE1  no hydrogen  3.398  N/A
ARG 181.A N    ASP 177.A O    no hydrogen  3.021  N/A
ARG 181.A N    TRP 178.A O    no hydrogen  3.023  N/A
ARG 181.A NE   ASP 177.A OD1  no hydrogen  3.257  N/A
ARG 181.A NE   ASP 177.A OD2  no hydrogen  2.906  N/A
ARG 181.A NH2  ASP 92.A OD2   no hydrogen  3.502  N/A
ARG 181.A NH2  ASP 177.A OD2  no hydrogen  3.152  N/A
ASN 182.A N    MET 179.A O    no hydrogen  3.190  N/A
ASN 182.A ND2  THR 184.A OG1  no hydrogen  2.951  N/A
ASN 182.A ND2  ASP 201.A OD1  no hydrogen  3.069  N/A
ASN 182.A ND2  ASP 201.A OD2  no hydrogen  3.184  N/A
THR 183.A N    ARG 96.A O     no hydrogen  2.987  N/A
THR 183.A OG1  ARG 96.A O     no hydrogen  2.708  N/A
THR 184.A N    ASN 182.A OD1  no hydrogen  3.106  N/A
THR 184.A OG1  ASN 182.A OD1  no hydrogen  3.094  N/A
THR 184.A OG1  THR 203.A OG1  no hydrogen  2.682  N/A
LEU 188.A N    GLY 185.A O    no hydrogen  3.112  N/A
ILE 189.A N    ASP 213.A OD2  no hydrogen  3.002  N/A
ARG 190.A NE   ASP 201.A OD1  no hydrogen  2.803  N/A
ARG 190.A NH1  LYS 180.A O    no hydrogen  3.491  N/A
ARG 190.A NH2  LYS 180.A O    no hydrogen  3.227  N/A
ARG 190.A NH2  ASP 201.A OD1  no hydrogen  2.876  N/A
ALA 191.A N    LEU 188.A O    no hydrogen  2.854  N/A
GLY 192.A N    ILE 189.A O    no hydrogen  2.995  N/A
ALA 200.A N    ILE 216.A O    no hydrogen  2.718  N/A
ASP 201.A N    MET 179.A O    no hydrogen  3.100  N/A
LYS 202.A N    ILE 214.A O    no hydrogen  2.832  N/A
LYS 202.A NZ   SER 98.A OG    no hydrogen  3.032  N/A
LYS 202.A NZ   THR 203.A O    no hydrogen  2.831  N/A
THR 203.A OG1  THR 184.A OG1  no hydrogen  2.682  N/A
GLY 204.A N    ASN 212.A O    no hydrogen  3.067  N/A
ALA 206.A N    THR 210.A O    no hydrogen  3.252  N/A
TYR 208.A N    LYS 236.A O    no hydrogen  2.810  N/A
TYR 208.A OH   ASN 141.A OD1  no hydrogen  2.889  N/A
THR 210.A N    ALA 206.A O    no hydrogen  3.164  N/A
THR 210.A N    SER 207.A O    no hydrogen  3.299  N/A
THR 210.A OG1  SER 207.A O    no hydrogen  2.954  N/A
ARG 211.A N    SER 231.A O    no hydrogen  2.900  N/A
ARG 211.A NE   ASP 242.A OD1  no hydrogen  2.821  N/A
ARG 211.A NH1  GLY 204.A O    no hydrogen  3.001  N/A
ARG 211.A NH2  ASP 242.A OD1  no hydrogen  3.024  N/A
ASN 212.A N    GLY 204.A O    no hydrogen  3.103  N/A
ASN 212.A ND2  ALA 37.A O     no hydrogen  2.848  N/A
ASN 212.A ND2  PHE 38.A O     no hydrogen  3.142  N/A
ASP 213.A N    VAL 229.A O    no hydrogen  2.900  N/A
ILE 214.A N    LYS 202.A O    no hydrogen  2.948  N/A
ALA 215.A N    LEU 227.A O    no hydrogen  2.802  N/A
ILE 216.A N    ALA 200.A O    no hydrogen  2.824  N/A
ILE 217.A N    VAL 225.A O    no hydrogen  2.844  N/A
TRP 218.A N    GLU 198.A O    no hydrogen  2.894  N/A
VAL 225.A N    ILE 217.A O    no hydrogen  2.694  N/A
VAL 226.A N    LEU 20.A O     no hydrogen  2.917  N/A
LEU 227.A N    ALA 215.A O    no hydrogen  2.852  N/A
ALA 228.A N    PHE 18.A O     no hydrogen  2.820  N/A
VAL 229.A N    ASP 213.A O    no hydrogen  2.938  N/A
LEU 230.A N    GLY 16.A O     no hydrogen  2.753  N/A
SER 231.A N    ASN 212.A OD1  no hydrogen  3.256  N/A
SER 231.A OG   ARG 211.A O    no hydrogen  2.654  N/A
SER 232.A N    LYS 14.A O     no hydrogen  2.968  N/A
ARG 233.A N    TYR 208.A O    no hydrogen  2.857  N/A
ARG 233.A NE   ASP 12.A O     no hydrogen  2.826  N/A
ARG 233.A NH1  LYS 239.A O    no hydrogen  3.170  N/A
ARG 233.A NH2  ASP 12.A O     no hydrogen  3.217  N/A
LYS 236.A NZ   GLU 139.A OE2  no hydrogen  3.102  N/A
ALA 238.A N    LYS 235.A O    no hydrogen  2.909  N/A
LYS 243.A N    ASP 241.A OD1  no hydrogen  3.157  N/A
LEU 244.A N    ASP 241.A O    no hydrogen  2.912  N/A
ALA 246.A N    ASP 242.A O    no hydrogen  3.087  N/A
GLU 247.A N    LYS 243.A O    no hydrogen  2.775  N/A
ALA 248.A N    LEU 244.A O    no hydrogen  2.829  N/A
THR 249.A N    ILE 245.A O    no hydrogen  2.930  N/A
THR 249.A OG1  ILE 245.A O    no hydrogen  2.841  N/A
LYS 250.A N    ALA 246.A O    no hydrogen  2.984  N/A
LYS 250.A NZ   GLU 247.A OE2  no hydrogen  3.563  N/A
VAL 251.A N    GLU 247.A O    no hydrogen  3.189  N/A
VAL 252.A N    ALA 248.A O    no hydrogen  3.139  N/A
MET 253.A N    THR 249.A O    no hydrogen  2.839  N/A
LYS 254.A N    LYS 250.A O    no hydrogen  2.888  N/A
ALA 255.A N    VAL 251.A O    no hydrogen  2.980  N/A
LEU 256.A N    VAL 252.A O    no hydrogen  2.873  N/A
LEU 256.A N    MET 253.A O    no hydrogen  3.260  N/A
ASN 257.A N    LYS 254.A O    no hydrogen  2.841  N/A