Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 3nkd_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
ARG 2.A NH1    VAL 59.A O     no hydrogen  2.685  N/A
ARG 2.A NH2    VAL 59.A O     no hydrogen  2.738  N/A
ILE 6.A N      CYS 39.A O     no hydrogen  3.164  N/A
LEU 8.A N      MET 41.A O     no hydrogen  2.938  N/A
TYR 10.A N     PRO 44.A O     no hydrogen  3.322  N/A
GLY 11.A N     GLY 45.A O     no hydrogen  3.152  N/A
GLN 12.A N     ILE 23.A O     no hydrogen  2.938  N/A
ILE 13.A N     ARG 47.A O     no hydrogen  2.801  N/A
ASP 14.A N     VAL 21.A O     no hydrogen  3.200  N/A
VAL 15.A N     ASP 14.A OD1   no hydrogen  2.711  N/A
ILE 16.A N     ALA 19.A O     no hydrogen  3.058  N/A
ALA 19.A N     ILE 16.A O     no hydrogen  3.153  N/A
VAL 21.A N     ASP 14.A O     no hydrogen  3.011  N/A
LEU 22.A N     THR 30.A O     no hydrogen  2.811  N/A
ILE 23.A N     GLN 12.A O     no hydrogen  2.953  N/A
ASP 24.A N     ILE 28.A O     no hydrogen  3.072  N/A
THR 26.A N     ASP 24.A OD1   no hydrogen  2.756  N/A
GLY 27.A N     ASP 24.A O     no hydrogen  2.881  N/A
GLY 27.A N     ASP 24.A OD1   no hydrogen  3.160  N/A
ILE 28.A N     ASP 24.A OD1   no hydrogen  3.362  N/A
THR 30.A N     LEU 22.A O     no hydrogen  2.779  N/A
ILE 32.A N     PHE 20.A O     no hydrogen  2.962  N/A
VAL 34.A N     ILE 32.A O     no hydrogen  2.885  N/A
SER 36.A N     PRO 33.A O     no hydrogen  2.898  N/A
VAL 37.A N     VAL 34.A O     no hydrogen  3.427  N/A
ALA 38.A N     SER 4.A O      no hydrogen  2.836  N/A
CYS 39.A SG    LEU 62.A O     no hydrogen  3.894  N/A
ILE 40.A N     LEU 62.A O     no hydrogen  3.073  N/A
MET 41.A N     ILE 6.A O      no hydrogen  2.883  N/A
LEU 42.A N     VAL 64.A O     no hydrogen  2.841  N/A
GLU 43.A N     LEU 8.A O      no hydrogen  2.803  N/A
THR 46.A OG1   GLU 43.A O     no hydrogen  2.857  N/A
ARG 47.A N     GLY 11.A O     no hydrogen  3.124  N/A
SER 49.A N     ILE 13.A O     no hydrogen  3.108  N/A
SER 49.A OG    ILE 13.A O     no hydrogen  3.544  N/A
SER 49.A OG    ASP 14.A OD1   no hydrogen  2.797  N/A
ALA 52.A N     SER 49.A OG    no hydrogen  3.020  N/A
VAL 53.A N     SER 49.A O     no hydrogen  3.133  N/A
ARG 54.A N     HIS 50.A O     no hydrogen  3.058  N/A
LEU 55.A N     ALA 51.A O     no hydrogen  3.103  N/A
ALA 56.A N     ALA 52.A O     no hydrogen  2.939  N/A
ALA 57.A N     VAL 53.A O     no hydrogen  2.909  N/A
GLN 58.A N     ARG 54.A O     no hydrogen  2.917  N/A
VAL 59.A N     LEU 55.A O     no hydrogen  3.130  N/A
GLY 60.A N     ALA 57.A O     no hydrogen  3.183  N/A
THR 61.A N     ALA 56.A O     no hydrogen  2.967  N/A
THR 61.A OG1   VAL 34.A O     no hydrogen  2.633  N/A
THR 61.A OG1   VAL 37.A O     no hydrogen  3.213  N/A
LEU 62.A N     ALA 38.A O     no hydrogen  3.122  N/A
VAL 64.A N     ILE 40.A O     no hydrogen  3.187  N/A
TRP 65.A N     ALA 75.A O     no hydrogen  2.900  N/A
VAL 66.A N     LEU 42.A O     no hydrogen  2.917  N/A
GLY 67.A N     ARG 72.A O     no hydrogen  2.862  N/A
ALA 69.A N     GLU 43.A OE1   no hydrogen  2.864  N/A
GLY 70.A N     GLY 67.A O     no hydrogen  3.035  N/A
VAL 71.A N     GLU 68.A O     no hydrogen  3.181  N/A
ARG 72.A NH1   TYR 74.A OH    no hydrogen  2.803  N/A
TYR 74.A N     TRP 65.A O     no hydrogen  2.738  N/A
ALA 75.A N     TRP 65.A O     no hydrogen  3.433  N/A
SER 76.A OG    GLY 77.A O     no hydrogen  3.232  N/A
GLY 77.A N     LEU 63.A O     no hydrogen  2.786  N/A
GLY 81.A N     GLN 78.A O     no hydrogen  2.955  N/A
ARG 83.A NE    ASP 85.A OD1   no hydrogen  3.112  N/A
ARG 83.A NH2   ASP 85.A OD1   no hydrogen  3.531  N/A
ARG 83.A NH2   ASP 85.A OD2   no hydrogen  2.816  N/A
LYS 86.A N     ASP 85.A OD1   no hydrogen  2.732  N/A
LEU 87.A N     ARG 83.A O     no hydrogen  3.202  N/A
LEU 88.A N     SER 84.A O     no hydrogen  2.886  N/A
TYR 89.A N     ASP 85.A O     no hydrogen  2.931  N/A
GLN 90.A N     LYS 86.A O     no hydrogen  3.051  N/A
ALA 91.A N     LEU 87.A O     no hydrogen  3.040  N/A
LYS 92.A N     LEU 88.A O     no hydrogen  3.025  N/A
LEU 93.A N     TYR 89.A O     no hydrogen  3.171  N/A
ALA 94.A N     GLN 90.A O     no hydrogen  2.966  N/A
LEU 95.A N     ALA 91.A O     no hydrogen  2.933  N/A
ASP 96.A N     LYS 92.A O     no hydrogen  3.320  N/A
LEU 99.A N     ASP 96.A OD1   no hydrogen  2.995  N/A
ARG 100.A N    ASP 96.A O     no hydrogen  2.780  N/A
ARG 100.A NE   PHE 188.A O    no hydrogen  2.893  N/A
ARG 100.A NH1  GLU 97.A OE1   no hydrogen  3.232  N/A
ARG 100.A NH1  GLU 97.A OE2   no hydrogen  3.544  N/A
ARG 100.A NH2  PHE 188.A O    no hydrogen  2.918  N/A
LEU 101.A N    GLU 97.A O     no hydrogen  3.068  N/A
LYS 102.A N    ASP 98.A O     no hydrogen  3.209  N/A
VAL 103.A N    LEU 99.A O     no hydrogen  3.088  N/A
VAL 104.A N    ARG 100.A O    no hydrogen  2.956  N/A
ARG 105.A N    LEU 101.A O    no hydrogen  2.851  N/A
ARG 105.A NH1  PRO 117.A O    no hydrogen  3.004  N/A
ARG 105.A NH2  ALA 116.A O    no hydrogen  3.114  N/A
LYS 106.A N    LYS 102.A O    no hydrogen  3.055  N/A
MET 107.A N    VAL 103.A O    no hydrogen  2.913  N/A
PHE 108.A N    VAL 104.A O    no hydrogen  2.874  N/A
GLU 109.A N    ARG 105.A O    no hydrogen  3.048  N/A
LEU 110.A N    LYS 106.A O    no hydrogen  3.015  N/A
ARG 111.A N    MET 107.A O    no hydrogen  3.128  N/A
ARG 111.A NH1  THR 136.A OG1  no hydrogen  3.224  N/A
ARG 111.A NH2  ARG 111.A O    no hydrogen  2.987  N/A
ARG 111.A NH2  THR 136.A OG1  no hydrogen  3.186  N/A
PHE 112.A N    PHE 108.A O    no hydrogen  2.896  N/A
GLY 113.A N    GLU 109.A O    no hydrogen  2.887  N/A
ARG 120.A NH1  ARG 119.A O    no hydrogen  3.095  N/A
SER 121.A N    GLN 124.A OE1  no hydrogen  2.912  N/A
GLN 124.A N    SER 121.A OG   no hydrogen  3.116  N/A
LEU 125.A N    SER 121.A O    no hydrogen  2.984  N/A
ARG 126.A N    VAL 122.A O    no hydrogen  3.149  N/A
GLY 127.A N    GLU 123.A O    no hydrogen  3.129  N/A
ILE 128.A N    GLN 124.A O    no hydrogen  2.944  N/A
GLU 129.A N    LEU 125.A O    no hydrogen  2.906  N/A
GLY 130.A N    ARG 126.A O    no hydrogen  3.079  N/A
SER 131.A N    GLY 127.A O    no hydrogen  2.860  N/A
SER 131.A OG   GLY 127.A O    no hydrogen  3.539  N/A
ARG 132.A N    GLU 129.A O    no hydrogen  3.243  N/A
THR 136.A N    ARG 132.A O    no hydrogen  3.268  N/A
THR 136.A OG1  ARG 132.A O    no hydrogen  3.361  N/A
TYR 137.A N    VAL 133.A O    no hydrogen  3.345  N/A
ALA 138.A N    ARG 134.A O    no hydrogen  3.237  N/A
LEU 139.A N    ALA 135.A O    no hydrogen  2.831  N/A
LEU 140.A N    THR 136.A O    no hydrogen  3.055  N/A
ALA 141.A N    TYR 137.A O    no hydrogen  2.878  N/A
LYS 142.A N    ALA 138.A O    no hydrogen  3.205  N/A
GLN 143.A N    LEU 139.A O    no hydrogen  2.989  N/A
TYR 144.A N    LEU 140.A O    no hydrogen  3.087  N/A
VAL 146.A N    ALA 141.A O    no hydrogen  2.880  N/A
ARG 151.A NH1  ASN 159.A O    no hydrogen  3.101  N/A
ARG 151.A NH1  ASN 159.A OD1  no hydrogen  2.812  N/A
ARG 151.A NH1  SER 163.A OG   no hydrogen  3.384  N/A
ARG 151.A NH2  SER 163.A OG   no hydrogen  2.980  N/A
ARG 152.A N    ASN 159.A OD1  no hydrogen  2.885  N/A
ASN 159.A ND2  GLY 150.A O    no hydrogen  3.088  N/A
GLN 160.A N    ASP 156.A O    no hydrogen  2.962  N/A
CYS 161.A N    THR 157.A O    no hydrogen  3.048  N/A
CYS 161.A SG   ALA 214.A O    no hydrogen  3.585  N/A
ILE 162.A N    ILE 158.A O    no hydrogen  2.819  N/A
SER 163.A N    ASN 159.A O    no hydrogen  3.207  N/A
SER 163.A OG   ASN 159.A O    no hydrogen  2.948  N/A
ALA 164.A N    GLN 160.A O    no hydrogen  2.896  N/A
ALA 165.A N    CYS 161.A O    no hydrogen  2.776  N/A
THR 166.A N    ILE 162.A O    no hydrogen  3.063  N/A
THR 166.A N    SER 163.A O    no hydrogen  3.266  N/A
THR 166.A OG1  ILE 162.A O    no hydrogen  3.124  N/A
SER 167.A N    ALA 164.A O    no hydrogen  3.123  N/A
SER 167.A OG   ALA 164.A O    no hydrogen  2.672  N/A
CYS 168.A SG   ALA 69.A O     no hydrogen  3.491  N/A
CYS 168.A SG   SER 167.A OG   no hydrogen  3.565  N/A
CYS 168.A SG   ARG 234.A O    no hydrogen  3.855  N/A
LEU 169.A N    THR 166.A O    no hydrogen  3.157  N/A
VAL 172.A N    CYS 168.A O    no hydrogen  2.993  N/A
THR 173.A N    LEU 169.A O    no hydrogen  3.008  N/A
THR 173.A OG1  LEU 169.A O    no hydrogen  2.727  N/A
GLU 174.A N    TYR 170.A O    no hydrogen  2.988  N/A
ALA 175.A N    GLY 171.A O    no hydrogen  2.896  N/A
ALA 176.A N    VAL 172.A O    no hydrogen  2.861  N/A
ILE 177.A N    THR 173.A O    no hydrogen  3.003  N/A
LEU 178.A N    GLU 174.A O    no hydrogen  3.024  N/A
ALA 179.A N    ALA 175.A O    no hydrogen  2.864  N/A
ALA 180.A N    ALA 176.A O    no hydrogen  2.854  N/A
GLY 181.A N    ILE 177.A O    no hydrogen  3.023  N/A
GLY 181.A N    LEU 178.A O    no hydrogen  3.138  N/A
TYR 182.A N    ILE 177.A O    no hydrogen  2.894  N/A
TYR 182.A OH   GLU 251.A OE1  no hydrogen  3.163  N/A
TYR 182.A OH   GLU 251.A OE2  no hydrogen  2.870  N/A
ILE 186.A N    ALA 183.A O    no hydrogen  3.302  N/A
PHE 188.A N    ASP 200.A OD2  no hydrogen  2.674  N/A
VAL 189.A N    ASP 200.A OD1  no hydrogen  3.315  N/A
VAL 189.A N    ASP 200.A OD2  no hydrogen  3.134  N/A
HIS 190.A N    ASP 200.A OD1  no hydrogen  2.775  N/A
HIS 190.A ND1  ASP 200.A OD1  no hydrogen  2.700  N/A
LYS 193.A N    SER 196.A OG   no hydrogen  2.831  N/A
SER 196.A N    LYS 193.A O    no hydrogen  3.322  N/A
SER 196.A OG   LYS 193.A O    no hydrogen  3.078  N/A
PHE 197.A N    PRO 184.A O    no hydrogen  2.948  N/A
TYR 199.A N    LEU 195.A O    no hydrogen  2.992  N/A
ASP 200.A N    SER 196.A O    no hydrogen  3.179  N/A
ILE 201.A N    PHE 197.A O    no hydrogen  3.158  N/A
ALA 202.A N    VAL 198.A O    no hydrogen  2.811  N/A
ASP 203.A N    TYR 199.A O    no hydrogen  3.080  N/A
ILE 205.A N    ILE 201.A O    no hydrogen  3.044  N/A
LYS 206.A N    ALA 202.A O    no hydrogen  2.827  N/A
LYS 206.A NZ   TYR 137.A OH   no hydrogen  3.502  N/A
ASP 208.A N    ILE 204.A O    no hydrogen  2.948  N/A
VAL 210.A N    ILE 205.A O    no hydrogen  3.164  N/A
VAL 211.A N    LYS 206.A O    no hydrogen  2.912  N/A
LYS 213.A N    THR 209.A O    no hydrogen  3.034  N/A
LYS 213.A NZ   ILE 236.A O    no hydrogen  3.409  N/A
LYS 213.A NZ   THR 242.A OG1  no hydrogen  2.969  N/A
ALA 214.A N    VAL 210.A O    no hydrogen  2.895  N/A
PHE 215.A N    VAL 211.A O    no hydrogen  2.943  N/A
GLU 216.A N    PRO 212.A O    no hydrogen  2.899  N/A
ILE 217.A N    LYS 213.A O    no hydrogen  2.986  N/A
ALA 218.A N    ALA 214.A O    no hydrogen  2.905  N/A
ARG 219.A N    PHE 215.A O    no hydrogen  2.878  N/A
ARG 220.A N    GLU 216.A O    no hydrogen  3.095  N/A
ASN 221.A N    ILE 217.A O    no hydrogen  3.264  N/A
GLU 224.A N    ASN 221.A OD1  no hydrogen  2.814  N/A
VAL 229.A N    PRO 225.A O    no hydrogen  3.168  N/A
ARG 230.A N    ASP 226.A O    no hydrogen  2.949  N/A
ARG 230.A NH1  GLN 160.A OE1  no hydrogen  3.464  N/A
LEU 231.A N    ARG 227.A O    no hydrogen  3.171  N/A
ALA 232.A N    GLU 228.A O    no hydrogen  2.985  N/A
CYS 233.A N    VAL 229.A O    no hydrogen  2.930  N/A
CYS 233.A SG   VAL 229.A O    no hydrogen  3.177  N/A
ARG 234.A N    ARG 230.A O    no hydrogen  2.961  N/A
ASP 235.A N    LEU 231.A O    no hydrogen  3.179  N/A
ILE 236.A N    CYS 233.A O    no hydrogen  3.394  N/A
ARG 238.A N    ASP 235.A O    no hydrogen  3.047  N/A
ARG 238.A NE   ASP 235.A OD1  no hydrogen  3.401  N/A
ARG 238.A NH1  GLU 43.A OE2   no hydrogen  2.956  N/A
ARG 238.A NH2  GLU 43.A OE1   no hydrogen  2.813  N/A
ARG 238.A NH2  GLU 43.A OE2   no hydrogen  3.561  N/A
SER 239.A OG   THR 242.A OG1  no hydrogen  3.294  N/A
THR 242.A N    SER 239.A OG   no hydrogen  3.138  N/A
THR 242.A OG1  SER 239.A OG   no hydrogen  3.294  N/A
LEU 243.A N    SER 239.A O    no hydrogen  3.002  N/A
ALA 244.A N    SER 240.A O    no hydrogen  2.995  N/A
LYS 245.A N    THR 242.A O    no hydrogen  3.143  N/A
LEU 246.A N    LEU 243.A O    no hydrogen  3.174  N/A
LEU 249.A N    LYS 245.A O    no hydrogen  3.049  N/A
ILE 250.A N    LEU 246.A O    no hydrogen  3.065  N/A
GLU 251.A N    ILE 247.A O    no hydrogen  2.961  N/A
ASP 252.A N    PRO 248.A O    no hydrogen  2.844  N/A
VAL 253.A N    LEU 249.A O    no hydrogen  2.877  N/A
LEU 254.A N    ILE 250.A O    no hydrogen  3.168  N/A
ALA 255.A N    GLU 251.A O    no hydrogen  2.852  N/A
ALA 256.A N    VAL 253.A O    no hydrogen  3.401  N/A
GLY 257.A N    LEU 254.A O    no hydrogen  3.146  N/A
GLU 258.A N    ALA 255.A O    no hydrogen  3.055  N/A