Finding intermodel H-bonds Finding intramodel H-bonds Constraints relaxed by 0.4 angstroms and 20 degrees Models used: #0 3nyd_A.cif H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): ALA 2.A N GLU 1.A O no hydrogen 2.232 N/A SER 5.A OG ALA 38.A O no hydrogen 3.328 N/A SER 5.A OG ASP 39.A O no hydrogen 3.419 N/A VAL 6.A N TYR 294.A OH no hydrogen 3.226 N/A ASP 7.A N ASP 39.A O no hydrogen 3.088 N/A GLN 8.A N SER 5.A OG no hydrogen 2.992 N/A LEU 9.A N SER 5.A O no hydrogen 2.946 N/A ILE 10.A N VAL 6.A O no hydrogen 2.881 N/A LYS 11.A N ASP 7.A O no hydrogen 2.994 N/A LYS 11.A NZ ASP 7.A OD1 no hydrogen 3.072 N/A LYS 11.A NZ ASP 7.A OD2 no hydrogen 2.835 N/A LYS 11.A NZ VAL 16.A O no hydrogen 2.825 N/A ALA 12.A N GLN 8.A O no hydrogen 3.065 N/A ARG 13.A N LEU 9.A O no hydrogen 3.306 N/A ARG 13.A N ILE 10.A O no hydrogen 3.105 N/A ARG 13.A NE LEU 301.A O no hydrogen 2.754 N/A ARG 13.A NH2 LEU 301.A O no hydrogen 3.567 N/A ARG 13.A NH2 GLN 302.A O no hydrogen 2.976 N/A GLY 14.A N LYS 11.A O no hydrogen 2.965 N/A LYS 15.A N ILE 10.A O no hydrogen 3.132 N/A LYS 15.A NZ CYS 255.A O no hydrogen 2.876 N/A LYS 15.A NZ VAL 258.A O no hydrogen 2.879 N/A LYS 15.A NZ CYS 261.A O no hydrogen 2.806 N/A VAL 16.A N VAL 262.A O no hydrogen 2.817 N/A TYR 17.A N VAL 262.A O no hydrogen 3.443 N/A PHE 18.A N ASP 7.A OD1 no hydrogen 2.810 N/A GLY 19.A N ILE 264.A O no hydrogen 2.729 N/A VAL 20.A N MET 42.A O no hydrogen 2.985 N/A ALA 21.A N VAL 266.A O no hydrogen 3.138 N/A THR 22.A N TRP 44.A O no hydrogen 2.848 N/A ARG 26.A N ASP 23.A O no hydrogen 3.016 N/A ARG 26.A NE GLU 46.A OE2 no hydrogen 2.952 N/A ARG 26.A NH2 GLU 46.A OE1 no hydrogen 2.904 N/A LEU 27.A N ASP 23.A O no hydrogen 3.088 N/A THR 28.A N GLN 24.A O no hydrogen 3.169 N/A THR 28.A OG1 GLN 24.A O no hydrogen 3.131 N/A THR 29.A N ARG 26.A O no hydrogen 3.299 N/A THR 29.A OG1 ASN 25.A O no hydrogen 2.610 N/A ASN 32.A ND2 ARG 26.A O no hydrogen 2.960 N/A ASN 32.A ND2 THR 29.A O no hydrogen 3.120 N/A ILE 35.A N LYS 31.A O no hydrogen 3.037 N/A ILE 36.A N ASN 32.A O no hydrogen 2.869 N/A GLN 37.A N ALA 33.A O no hydrogen 2.886 N/A GLN 37.A NE2.A ALA 33.A O no hydrogen 3.395 N/A ALA 38.A N ALA 34.A O no hydrogen 3.033 N/A ASP 39.A N ILE 35.A O no hydrogen 2.824 N/A PHE 40.A N ILE 36.A O no hydrogen 3.176 N/A GLY 41.A N PHE 18.A O no hydrogen 2.888 N/A VAL 43.A N LEU 79.A O no hydrogen 2.884 N/A TRP 44.A N VAL 20.A O no hydrogen 3.065 N/A TRP 44.A NE1 SER 265.A OG.A no hydrogen 2.874 N/A GLU 46.A N THR 22.A O no hydrogen 2.867 N/A ASN 47.A N ASP 23.A OD2 no hydrogen 2.820 N/A SER 48.A N ASP 23.A OD2 no hydrogen 3.064 N/A SER 48.A OG ASP 23.A OD1 no hydrogen 2.741 N/A LYS 50.A N ASN 47.A O no hydrogen 3.088 N/A LYS 50.A NZ GLU 46.A O no hydrogen 3.049 N/A LYS 50.A NZ ASN 47.A OD1 no hydrogen 2.874 N/A ASP 52.A N GLN 90.A O.A no hydrogen 2.914 N/A ALA 53.A N LYS 50.A O no hydrogen 3.041 N/A THR 54.A N LYS 50.A O no hydrogen 2.931 N/A THR 54.A N TRP 51.A O no hydrogen 3.212 N/A THR 54.A OG1 LYS 50.A O no hydrogen 2.843 N/A GLU 55.A N TRP 51.A O no hydrogen 2.846 N/A GLY 59.A N GLU 55.A OE2 no hydrogen 2.791 N/A ASN 60.A N SER 57.A O no hydrogen 2.992 N/A ASN 62.A N THR 54.A O no hydrogen 2.753 N/A ASP 67.A N PHE 63.A O.A no hydrogen 2.773 N/A ASP 67.A N PHE 63.A O.B no hydrogen 2.793 N/A TYR 68.A N ALA 64.A O no hydrogen 3.075 N/A LEU 69.A N GLY 65.A O no hydrogen 3.247 N/A VAL 70.A N ALA 66.A O no hydrogen 2.915 N/A ASN 71.A N ASP 67.A O no hydrogen 2.908 N/A TRP 72.A N TYR 68.A O no hydrogen 2.918 N/A ALA 73.A N LEU 69.A O no hydrogen 2.901 N/A GLN 74.A N VAL 70.A O no hydrogen 2.969 N/A GLN 75.A N ASN 71.A O no hydrogen 2.906 N/A ASN 76.A N TRP 72.A O no hydrogen 2.942 N/A ASN 76.A N ALA 73.A O no hydrogen 3.214 N/A ASN 76.A ND2 TRP 72.A O no hydrogen 2.891 N/A GLY 77.A N GLN 74.A O no hydrogen 3.290 N/A LYS 78.A N ALA 73.A O no hydrogen 2.929 N/A LYS 78.A NZ ILE 36.A O no hydrogen 3.226 N/A LYS 78.A NZ GLN 37.A O no hydrogen 2.866 N/A LYS 78.A NZ PHE 40.A O no hydrogen 2.739 N/A LEU 79.A N GLY 41.A O no hydrogen 3.029 N/A GLY 81.A N VAL 43.A O no hydrogen 2.943 N/A GLY 82.A N ALA 125.A O no hydrogen 2.977 N/A LEU 85.A N ASP 127.A O no hydrogen 2.982 N/A VAL 86.A N VAL 128.A O no hydrogen 2.862 N/A TRP 87.A NE1 GLU 131.A OE1 no hydrogen 2.856 N/A SER 89.A OG.B GLU 131.A OE1 no hydrogen 3.544 N/A LEU 91.A N.B HIS 88.A O no hydrogen 3.293 N/A TRP 94.A NE1 GLU 55.A O no hydrogen 2.953 N/A VAL 95.A N PRO 92.A O no hydrogen 2.912 N/A SER 96.A N PRO 92.A O no hydrogen 3.378 N/A SER 96.A OG SER 93.A O.A no hydrogen 3.459 N/A SER 97.A N SER 93.A O.A no hydrogen 2.917 N/A SER 97.A N SER 93.A O.B no hydrogen 3.054 N/A SER 97.A OG.A SER 93.A O.A no hydrogen 3.023 N/A SER 97.A OG.A SER 93.A O.B no hydrogen 2.756 N/A SER 97.A OG.B SER 93.A O.A no hydrogen 3.425 N/A SER 97.A OG.B SER 93.A O.B no hydrogen 3.322 N/A SER 97.A OG.B TRP 94.A O no hydrogen 3.320 N/A ILE 98.A N VAL 95.A O no hydrogen 3.056 N/A LYS 101.A NZ ILE 148.A O no hydrogen 3.458 N/A THR 103.A N ASP 100.A OD2 no hydrogen 2.966 N/A THR 103.A OG1 ASP 100.A OD2 no hydrogen 2.841 N/A LEU 104.A N ASP 100.A O no hydrogen 2.901 N/A THR 105.A N LYS 101.A O no hydrogen 2.876 N/A THR 105.A OG1 LYS 101.A O no hydrogen 2.777 N/A ASN 106.A N ASN 102.A O no hydrogen 3.030 N/A VAL 107.A N THR 103.A O no hydrogen 2.848 N/A MET 108.A N LEU 104.A O no hydrogen 2.863 N/A LYS 109.A N THR 105.A O no hydrogen 2.896 N/A ASN 110.A N ASN 106.A O no hydrogen 2.752 N/A HIS 111.A N VAL 107.A O no hydrogen 2.962 N/A HIS 111.A ND1 GLU 55.A OE1 no hydrogen 2.636 N/A ILE 112.A N MET 108.A O no hydrogen 2.989 N/A THR 113.A N LYS 109.A O no hydrogen 2.765 N/A THR 113.A OG1 LYS 109.A O no hydrogen 2.872 N/A THR 114.A N ASN 110.A O no hydrogen 2.822 N/A THR 114.A OG1 ASN 110.A O no hydrogen 2.777 N/A LEU 115.A N.A HIS 111.A O no hydrogen 3.224 N/A LEU 115.A N.B HIS 111.A O no hydrogen 3.217 N/A MET 116.A N ILE 112.A O no hydrogen 2.998 N/A THR 117.A N THR 113.A O no hydrogen 2.892 N/A THR 117.A OG1 THR 113.A O no hydrogen 2.723 N/A ARG 118.A N THR 114.A O no hydrogen 3.105 N/A ARG 118.A NE ASP 67.A OD1 no hydrogen 2.981 N/A ARG 118.A NH2 ASP 67.A OD1 no hydrogen 3.536 N/A ARG 118.A NH2 ASP 67.A OD2 no hydrogen 2.737 N/A TYR 119.A OH ASP 67.A OD1 no hydrogen 2.668 N/A LYS 120.A N THR 117.A O no hydrogen 3.177 N/A GLY 121.A N ASP 164.A OD2 no hydrogen 2.913 N/A LYS 122.A N TYR 119.A O no hydrogen 2.856 N/A ARG 124.A N ILE 80.A O no hydrogen 2.837 N/A ARG 124.A NH1 GLU 232.A OE1 no hydrogen 2.913 N/A ARG 124.A NH1 GLU 232.A OE2 no hydrogen 3.529 N/A ARG 124.A NH2 GLU 232.A OE2 no hydrogen 2.813 N/A TRP 126.A N LYS 168.A O no hydrogen 2.917 N/A ASP 127.A N GLY 82.A O no hydrogen 2.920 N/A VAL 128.A N TYR 170.A O no hydrogen 2.868 N/A GLY 130.A N VAL 86.A O no hydrogen 2.952 N/A GLU 131.A N MET 172.A O no hydrogen 2.870 N/A PHE 133.A N ASP 173.A OD2 no hydrogen 3.159 N/A ASN 134.A N SER 138.A O no hydrogen 2.756 N/A ASN 134.A ND2 SER 138.A OG no hydrogen 2.931 N/A GLY 137.A N ASN 134.A O no hydrogen 2.941 N/A SER 138.A N ASP 136.A OD1 no hydrogen 2.916 N/A SER 138.A OG ASP 136.A OD1 no hydrogen 2.614 N/A ARG 140.A N ALA 132.A O no hydrogen 2.744 N/A ARG 140.A NE GLU 131.A O no hydrogen 2.793 N/A ARG 140.A NH2 TYR 174.A OH no hydrogen 3.065 N/A THR 142.A N ARG 140.A O no hydrogen 2.918 N/A LEU 145.A N THR 142.A OG1 no hydrogen 3.361 N/A ASN 146.A N THR 142.A O no hydrogen 2.844 N/A ASN 146.A ND2 GLN 141.A O no hydrogen 3.367 N/A VAL 147.A N VAL 143.A O no hydrogen 2.910 N/A ILE 148.A N PHE 144.A O no hydrogen 2.919 N/A GLY 149.A N LEU 145.A O no hydrogen 2.806 N/A TYR 152.A N GLY 149.A O no hydrogen 3.067 N/A ILE 153.A N GLU 150.A O no hydrogen 3.453 N/A ILE 155.A N ASP 151.A O no hydrogen 2.984 N/A ALA 156.A N TYR 152.A O no hydrogen 2.882 N/A PHE 157.A N ILE 153.A O no hydrogen 3.076 N/A GLN 158.A N PRO 154.A O no hydrogen 2.893 N/A THR 159.A N ILE 155.A O no hydrogen 2.860 N/A THR 159.A OG1 ILE 155.A O no hydrogen 2.741 N/A ALA 160.A N ALA 156.A O no hydrogen 3.001 N/A ARG 161.A N PHE 157.A O no hydrogen 2.925 N/A ARG 161.A NH1 ASP 202.A OD2 no hydrogen 2.870 N/A ARG 161.A NH2 ASP 202.A OD1 no hydrogen 2.977 N/A ARG 161.A NH2 ASP 202.A OD2 no hydrogen 3.559 N/A ALA 162.A N GLN 158.A O no hydrogen 3.188 N/A ALA 163.A N THR 159.A O no hydrogen 3.016 N/A ASP 164.A N ALA 160.A O no hydrogen 3.089 N/A ASN 166.A N ASP 164.A OD1 no hydrogen 3.045 N/A ALA 167.A N ASP 164.A O no hydrogen 3.243 N/A LYS 168.A N ARG 124.A O no hydrogen 2.899 N/A LEU 169.A N ASP 202.A OD2 no hydrogen 2.861 N/A TYR 170.A N TRP 126.A O no hydrogen 2.877 N/A TYR 170.A OH GLU 232.A OE1 no hydrogen 2.599 N/A ILE 171.A N GLY 203.A O no hydrogen 3.031 N/A MET 172.A N VAL 129.A O no hydrogen 2.991 N/A ASP 173.A N GLY 205.A O no hydrogen 3.120 N/A TYR 174.A N ASP 173.A OD1 no hydrogen 2.861 N/A SER 180.A N SER 178.A OG no hydrogen 3.356 N/A SER 180.A OG SER 178.A OG no hydrogen 3.334 N/A TYR 181.A N SER 178.A O no hydrogen 3.214 N/A TYR 181.A OH GLU 135.A OE2 no hydrogen 2.601 N/A LYS 183.A NZ GLU 135.A OE1 no hydrogen 2.748 N/A LYS 183.A NZ ASP 173.A OD1 no hydrogen 3.227 N/A LYS 183.A NZ TYR 174.A O no hydrogen 2.904 N/A THR 184.A OG1 SER 178.A O no hydrogen 2.795 N/A GLN 185.A N TYR 181.A O no hydrogen 3.233 N/A GLN 185.A NE2 ALA 179.A O no hydrogen 2.760 N/A ALA 186.A N PRO 182.A O no hydrogen 2.854 N/A ILE 187.A N LYS 183.A O no hydrogen 3.044 N/A VAL 188.A N THR 184.A O no hydrogen 3.342 N/A ASN 189.A N GLN 185.A O no hydrogen 3.055 N/A ARG 190.A N ALA 186.A O no hydrogen 2.909 N/A VAL 191.A N ILE 187.A O no hydrogen 2.927 N/A LYS 192.A N VAL 188.A O no hydrogen 2.969 N/A GLN 193.A N ASN 189.A O no hydrogen 3.111 N/A TRP 194.A N ARG 190.A O no hydrogen 2.849 N/A ARG 195.A N VAL 191.A O no hydrogen 2.879 N/A ARG 195.A NH1 ILE 201.A O no hydrogen 2.770 N/A ALA 196.A N LYS 192.A O no hydrogen 2.944 N/A ALA 197.A N GLN 193.A O no hydrogen 3.123 N/A GLY 198.A N ARG 195.A O no hydrogen 2.842 N/A VAL 199.A N TRP 194.A O no hydrogen 2.905 N/A ILE 201.A N VAL 199.A O no hydrogen 2.888 N/A ASP 202.A N LEU 169.A O no hydrogen 2.786 N/A GLY 203.A N LEU 169.A O no hydrogen 3.042 N/A ILE 204.A N GLU 232.A O no hydrogen 3.268 N/A GLY 205.A N ILE 171.A O no hydrogen 2.844 N/A SER 206.A N SER 234.A O no hydrogen 2.908 N/A GLN 207.A N ASP 173.A O no hydrogen 2.816 N/A GLN 207.A NE2 GLU 131.A OE2 no hydrogen 2.816 N/A THR 208.A N LEU 236.A O.A no hydrogen 3.015 N/A THR 208.A N LEU 236.A O.B no hydrogen 3.023 N/A THR 208.A OG1 SER 206.A O no hydrogen 2.879 N/A HIS 209.A ND1 ASP 239.A OD1 no hydrogen 2.807 N/A HIS 209.A NE2 GLN 207.A OE1 no hydrogen 2.884 N/A LEU 210.A N ASP 239.A O no hydrogen 2.991 N/A SER 211.A N GLN 214.A OE1 no hydrogen 2.825 N/A GLY 213.A N ASP 247.A OD2 no hydrogen 2.908 N/A GLN 214.A N SER 211.A O no hydrogen 3.039 N/A GLY 215.A N ASP 247.A OD1 no hydrogen 2.902 N/A GLY 217.A N GLN 214.A O no hydrogen 3.310 N/A VAL 218.A N GLY 215.A O no hydrogen 2.988 N/A LEU 219.A N ALA 216.A O no hydrogen 3.041 N/A GLN 220.A N GLY 217.A O no hydrogen 2.989 N/A ALA 221.A N GLY 217.A O no hydrogen 2.942 N/A LEU 222.A N VAL 218.A O no hydrogen 2.908 N/A LEU 224.A N GLN 220.A O no hydrogen 3.437 N/A LEU 225.A N ALA 221.A O no hydrogen 2.933 N/A ALA 226.A N LEU 222.A O no hydrogen 2.875 N/A SER 227.A N PRO 223.A O no hydrogen 3.103 N/A SER 227.A N LEU 224.A O no hydrogen 2.942 N/A SER 227.A OG LEU 224.A O no hydrogen 2.673 N/A ALA 228.A N LEU 225.A O no hydrogen 3.153 N/A GLY 229.A N ALA 226.A O no hydrogen 3.224 N/A THR 230.A OG1 GLU 232.A O no hydrogen 2.637 N/A GLU 232.A N ASP 202.A O no hydrogen 3.036 N/A VAL 233.A N SER 260.A O no hydrogen 2.928 N/A SER 234.A N ILE 204.A O no hydrogen 3.011 N/A ILE 235.A N GLY 263.A O no hydrogen 3.208 N/A LEU 236.A N.A SER 206.A O no hydrogen 2.884 N/A LEU 236.A N.B SER 206.A O no hydrogen 2.888 N/A LEU 238.A N SER 265.A O no hydrogen 2.878 N/A ASP 239.A N THR 208.A O no hydrogen 3.106 N/A VAL 240.A N PRO 281.A O no hydrogen 3.038 N/A ALA 241.A N LEU 210.A O no hydrogen 2.905 N/A GLY 242.A N THR 279.A O no hydrogen 2.877 N/A ALA 243.A N VAL 240.A O no hydrogen 2.834 N/A SER 244.A OG.A ASP 247.A OD2 no hydrogen 3.085 N/A ASP 247.A N SER 244.A OG.A no hydrogen 2.916 N/A TYR 248.A N SER 244.A O no hydrogen 3.089 N/A TYR 248.A OH PRO 281.A O no hydrogen 2.686 N/A VAL 249.A N PRO 245.A O no hydrogen 2.830 N/A ASN 250.A N THR 246.A O no hydrogen 2.957 N/A VAL 251.A N ASP 247.A O no hydrogen 3.148 N/A VAL 252.A N TYR 248.A O no hydrogen 3.039 N/A ASN 253.A N VAL 249.A O no hydrogen 2.865 N/A ASN 253.A ND2 ASP 300.A OD1 no hydrogen 3.260 N/A ALA 254.A N ASN 250.A O no hydrogen 2.938 N/A CYS 255.A N VAL 251.A O no hydrogen 3.159 N/A LEU 256.A N VAL 252.A O no hydrogen 2.953 N/A ASN 257.A N ASN 253.A O no hydrogen 2.823 N/A VAL 258.A N CYS 255.A O no hydrogen 3.182 N/A CYS 261.A N VAL 258.A O no hydrogen 2.973 N/A CYS 261.A SG VAL 233.A O no hydrogen 3.890 N/A CYS 261.A SG GLY 263.A O no hydrogen 3.576 N/A VAL 262.A N VAL 233.A O no hydrogen 3.049 N/A ILE 264.A N TYR 17.A O no hydrogen 3.419 N/A SER 265.A N ILE 235.A O no hydrogen 2.887 N/A VAL 266.A N GLY 19.A O no hydrogen 2.949 N/A PHE 267.A N LEU 238.A O no hydrogen 2.932 N/A ASP 271.A N PHE 284.A O no hydrogen 2.941 N/A ASP 273.A N ALA 270.A O no hydrogen 2.924 N/A SER 274.A N ASP 271.A O no hydrogen 3.057 N/A TRP 275.A NE1.A ASP 239.A OD2 no hydrogen 2.864 N/A TRP 275.A NE1.B ASP 239.A OD2 no hydrogen 2.854 N/A ARG 276.A N SER 274.A OG no hydrogen 2.847 N/A ARG 276.A NH1 LEU 210.A O no hydrogen 3.503 N/A ARG 276.A NH2 LEU 210.A O no hydrogen 2.869 N/A ARG 276.A NH2 ASP 239.A OD1 no hydrogen 2.694 N/A THR 279.A N ARG 276.A O no hydrogen 2.980 N/A THR 279.A OG1 ARG 276.A O no hydrogen 2.769 N/A THR 280.A N ALA 277.A O no hydrogen 2.918 N/A LEU 282.A N ASP 271.A OD1 no hydrogen 2.877 N/A ASP 285.A N ASN 289.A O no hydrogen 2.949 N/A ASN 287.A N ASP 285.A OD1 no hydrogen 2.928 N/A PHE 288.A N ASP 285.A O no hydrogen 2.880 N/A ASN 289.A N ASP 285.A OD1 no hydrogen 2.955 N/A LYS 291.A N LEU 283.A O no hydrogen 2.881 N/A LYS 291.A NZ ASP 271.A OD1 no hydrogen 3.174 N/A LYS 291.A NZ ASP 271.A OD2 no hydrogen 2.823 N/A LYS 291.A NZ THR 280.A O no hydrogen 2.867 N/A LYS 291.A NZ LEU 282.A O no hydrogen 2.859 N/A TYR 294.A OH GLN 4.A O no hydrogen 2.608 N/A ASN 295.A N LYS 291.A O no hydrogen 3.230 N/A ALA 296.A N PRO 292.A O no hydrogen 2.826 N/A ILE 297.A N ALA 293.A O no hydrogen 2.997 N/A VAL 298.A N TYR 294.A O no hydrogen 3.005 N/A GLN 299.A N ASN 295.A O no hydrogen 2.981 N/A GLN 299.A NE2 GLN 302.A OE1.A no hydrogen 3.254 N/A ASP 300.A N ALA 296.A O no hydrogen 2.917 N/A LEU 301.A N ILE 297.A O no hydrogen 2.887 N/A GLN 302.A N VAL 298.A O no hydrogen 2.859 N/A GLN 302.A NE2.A ALA 3.A O no hydrogen 2.710 N/A GLN 303.A N GLN 302.A OE1.B no hydrogen 3.201 N/A GLN 303.A NE2 ALA 12.A O no hydrogen 3.151 N/A