Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 3pyd_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
VAL 2.A N      VAL 42.A O     no hydrogen  2.947  N/A
THR 3.A N      SER 297.A O    no hydrogen  2.944  N/A
VAL 4.A N      VAL 40.A O     no hydrogen  2.904  N/A
ARG 5.A N      ARG 294.A O    no hydrogen  2.873  N/A
ARG 5.A NH1    GLU 39.A OE2   no hydrogen  2.862  N/A
VAL 6.A N      ASP 38.A O     no hydrogen  2.942  N/A
GLY 8.A N      LEU 36.A O     no hydrogen  2.874  N/A
LYS 9.A N      MET 99.A O     no hydrogen  2.991  N/A
LYS 9.A NZ     ASN 11.A OD1   no hydrogen  3.272  N/A
VAL 10.A N     HIS 32.A O     no hydrogen  2.872  N/A
ASN 11.A N     SER 251.A OG   no hydrogen  2.862  N/A
LEU 12.A N     VAL 30.A O     no hydrogen  2.947  N/A
TYR 13.A OH    GLY 197.A O    no hydrogen  2.689  N/A
LEU 14.A N     GLY 219.A O    no hydrogen  3.050  N/A
ALA 15.A N     THR 28.A O     no hydrogen  2.931  N/A
VAL 16.A N     GLU 221.A OE1  no hydrogen  2.838  N/A
GLY 17.A N     GLU 26.A O     no hydrogen  2.754  N/A
ARG 20.A N     TYR 24.A O     no hydrogen  3.034  N/A
ARG 20.A NH1   GLU 26.A OE2   no hydrogen  3.359  N/A
THR 28.A N     ALA 15.A O     no hydrogen  3.174  N/A
THR 29.A N     GLY 148.A O    no hydrogen  2.902  N/A
VAL 30.A N     TYR 13.A O     no hydrogen  2.920  N/A
PHE 31.A N     ALA 146.A O    no hydrogen  2.854  N/A
HIS 32.A N     VAL 10.A O     no hydrogen  2.917  N/A
ALA 33.A N     GLY 144.A O    no hydrogen  2.863  N/A
VAL 34.A N     GLY 8.A O      no hydrogen  3.150  N/A
SER 35.A N     THR 287.A O    no hydrogen  2.855  N/A
SER 35.A OG    THR 287.A O    no hydrogen  3.375  N/A
LEU 36.A N     VAL 34.A O     no hydrogen  2.808  N/A
ASP 38.A N     VAL 6.A O      no hydrogen  2.978  N/A
GLU 39.A N     ASP 90.A O     no hydrogen  3.008  N/A
VAL 40.A N     VAL 4.A O      no hydrogen  2.889  N/A
THR 41.A N     MET 88.A O     no hydrogen  2.772  N/A
VAL 42.A N     VAL 2.A O      no hydrogen  2.787  N/A
ARG 43.A N     SER 86.A O     no hydrogen  3.051  N/A
ALA 45.A N     ASP 84.A O     no hydrogen  3.003  N/A
SER 49.A N     VAL 85.A O     no hydrogen  2.996  N/A
GLU 51.A N     ILE 87.A O     no hydrogen  2.901  N/A
VAL 53.A N     ILE 89.A O     no hydrogen  2.825  N/A
ALA 57.A N     GLY 54.A O     no hydrogen  2.973  N/A
GLN 59.A N     GLY 56.A O     no hydrogen  2.977  N/A
LEU 60.A N     ALA 57.A O     no hydrogen  3.121  N/A
ARG 65.A N     ASP 63.A OD2   no hydrogen  3.085  N/A
ARG 65.A NE    ASP 63.A OD1   no hydrogen  3.000  N/A
ARG 65.A NH2   ASP 63.A OD1   no hydrogen  2.880  N/A
ASN 66.A N     ASP 63.A O     no hydrogen  2.926  N/A
TRP 69.A N     ASN 66.A O     no hydrogen  2.857  N/A
TRP 69.A NE1   GLU 73.A OE1   no hydrogen  3.213  N/A
GLN 70.A N     ASN 66.A O     no hydrogen  3.112  N/A
GLN 70.A NE2   GLU 64.A O     no hydrogen  3.129  N/A
ALA 71.A N     LEU 67.A O     no hydrogen  2.851  N/A
ALA 72.A N     ALA 68.A O     no hydrogen  3.177  N/A
GLU 73.A N     TRP 69.A O     no hydrogen  3.178  N/A
LEU 74.A N     GLN 70.A O     no hydrogen  2.894  N/A
MET 75.A N     ALA 71.A O     no hydrogen  2.834  N/A
ALA 76.A N     ALA 72.A O     no hydrogen  3.087  N/A
GLU 77.A N     GLU 73.A O     no hydrogen  3.051  N/A
HIS 78.A N     LEU 74.A O     no hydrogen  2.819  N/A
VAL 79.A N     MET 75.A O     no hydrogen  3.385  N/A
VAL 79.A N     ALA 76.A O     no hydrogen  3.202  N/A
GLY 80.A N     GLU 77.A O     no hydrogen  3.072  N/A
ARG 81.A N     ALA 76.A O     no hydrogen  2.850  N/A
ASP 84.A N     ALA 82.A O     no hydrogen  2.697  N/A
VAL 85.A N     PRO 83.A O     no hydrogen  2.798  N/A
SER 86.A N     ARG 43.A O     no hydrogen  2.787  N/A
ILE 87.A N     SER 49.A O     no hydrogen  2.765  N/A
MET 88.A N     THR 41.A O     no hydrogen  2.752  N/A
ILE 89.A N     GLU 51.A O     no hydrogen  2.773  N/A
ASP 90.A N     GLU 39.A O     no hydrogen  2.835  N/A
LYS 91.A N     VAL 53.A O     no hydrogen  2.868  N/A
LYS 91.A NZ    ASP 38.A OD2   no hydrogen  2.882  N/A
LYS 91.A NZ    ASP 105.A OD1  no hydrogen  3.230  N/A
SER 92.A N     VAL 37.A O     no hydrogen  3.091  N/A
SER 92.A N     ASP 38.A OD1   no hydrogen  3.116  N/A
ILE 93.A N     ASP 38.A OD1   no hydrogen  3.009  N/A
ALA 104.A N    ALA 100.A O    no hydrogen  2.900  N/A
ASP 105.A N    GLY 101.A O    no hydrogen  2.992  N/A
ALA 106.A N    GLY 102.A O    no hydrogen  3.081  N/A
ALA 107.A N    SER 103.A O    no hydrogen  2.998  N/A
ALA 108.A N    ALA 104.A O    no hydrogen  2.954  N/A
VAL 109.A N    ASP 105.A O    no hydrogen  2.933  N/A
LEU 110.A N    ALA 106.A O    no hydrogen  3.084  N/A
VAL 111.A N    ALA 107.A O    no hydrogen  3.171  N/A
ALA 112.A N    ALA 108.A O    no hydrogen  2.858  N/A
MET 113.A N    VAL 109.A O    no hydrogen  2.985  N/A
ASN 114.A N    LEU 110.A O    no hydrogen  2.888  N/A
ASN 114.A ND2  VAL 121.A O    no hydrogen  2.960  N/A
SER 115.A N    VAL 111.A O    no hydrogen  3.016  N/A
LEU 116.A N    ALA 112.A O    no hydrogen  2.613  N/A
TRP 117.A N    MET 113.A O    no hydrogen  2.848  N/A
TRP 117.A NE1  ASN 44.A OD1   no hydrogen  3.098  N/A
GLU 118.A N    SER 115.A O    no hydrogen  2.960  N/A
LEU 119.A N    ASN 114.A O    no hydrogen  2.981  N/A
ASN 120.A N    ASN 114.A O    no hydrogen  3.100  N/A
VAL 121.A N    ASN 114.A OD1  no hydrogen  2.810  N/A
ARG 123.A NH1  ALA 293.A O    no hydrogen  3.146  N/A
ARG 123.A NH2  ALA 293.A O    no hydrogen  2.837  N/A
ASP 125.A N    PRO 122.A O    no hydrogen  2.929  N/A
LEU 126.A N    PRO 122.A O    no hydrogen  3.332  N/A
ARG 127.A N    ARG 123.A O    no hydrogen  3.011  N/A
MET 128.A N    ARG 124.A O    no hydrogen  3.078  N/A
LEU 129.A N    ASP 125.A O    no hydrogen  2.983  N/A
ALA 130.A N    LEU 126.A O    no hydrogen  2.782  N/A
ALA 131.A N    ARG 127.A O    no hydrogen  3.055  N/A
ARG 132.A N    LEU 129.A O    no hydrogen  2.991  N/A
LEU 133.A N    ALA 130.A O    no hydrogen  2.998  N/A
GLY 134.A N    ALA 130.A O    no hydrogen  3.207  N/A
VAL 137.A N    GLY 134.A O    no hydrogen  3.216  N/A
ALA 140.A N    ASP 136.A O    no hydrogen  3.366  N/A
LEU 141.A N    VAL 137.A O    no hydrogen  3.203  N/A
HIS 142.A N    PRO 138.A O    no hydrogen  2.944  N/A
HIS 142.A ND1  GLY 143.A O    no hydrogen  2.643  N/A
HIS 142.A NE2  THR 157.A OG1  no hydrogen  2.823  N/A
GLY 143.A N    PHE 139.A O    no hydrogen  2.662  N/A
GLY 144.A N    VAL 290.A O    no hydrogen  2.892  N/A
ALA 146.A N    PHE 31.A O     no hydrogen  2.967  N/A
LEU 147.A N    ALA 156.A O    no hydrogen  2.875  N/A
GLY 148.A N    THR 29.A O     no hydrogen  2.824  N/A
ARG 151.A NE   TYR 24.A OH    no hydrogen  3.323  N/A
ARG 151.A NH2  TYR 24.A OH    no hydrogen  3.152  N/A
GLU 153.A N    GLY 150.A O    no hydrogen  3.139  N/A
ALA 156.A N    LEU 147.A O    no hydrogen  3.018  N/A
THR 157.A OG1  HIS 142.A NE2  no hydrogen  2.823  N/A
VAL 158.A N    THR 145.A O    no hydrogen  2.937  N/A
SER 160.A OG   LEU 206.A O    no hydrogen  3.095  N/A
ARG 161.A N    ALA 207.A O    no hydrogen  3.234  N/A
PHE 164.A N    GLY 288.A O    no hydrogen  2.627  N/A
TRP 166.A N    ALA 286.A O    no hydrogen  2.906  N/A
VAL 167.A N    PHE 259.A O    no hydrogen  2.811  N/A
LEU 168.A N    ARG 284.A O    no hydrogen  2.858  N/A
ALA 169.A N    CYS 257.A O    no hydrogen  2.903  N/A
PHE 170.A N    THR 282.A O    no hydrogen  2.934  N/A
SER 173.A OG   GLY 174.A O    no hydrogen  3.225  N/A
VAL 180.A N    LEU 176.A O    no hydrogen  3.030  N/A
TYR 181.A N    THR 177.A O    no hydrogen  2.868  N/A
ASN 182.A N    SER 178.A O    no hydrogen  3.090  N/A
GLU 183.A N    ALA 179.A O    no hydrogen  3.153  N/A
LEU 184.A N    VAL 180.A O    no hydrogen  2.923  N/A
ASP 185.A N    TYR 181.A O    no hydrogen  2.987  N/A
ARG 186.A N    ASN 182.A O    no hydrogen  2.972  N/A
ARG 186.A NH1  GLU 183.A OE2  no hydrogen  3.464  N/A
LEU 187.A N    GLU 183.A O    no hydrogen  2.779  N/A
ARG 188.A N    LEU 184.A O    no hydrogen  2.941  N/A
ARG 188.A NH1  VAL 16.A O     no hydrogen  2.939  N/A
ARG 188.A NH1  GLY 17.A O     no hydrogen  3.244  N/A
ARG 188.A NH2  VAL 16.A O     no hydrogen  2.740  N/A
GLU 189.A N    ASP 185.A O    no hydrogen  3.031  N/A
GLU 189.A N    ARG 186.A O    no hydrogen  3.034  N/A
VAL 190.A N    ARG 186.A O    no hydrogen  3.000  N/A
ARG 195.A NH1  ASP 18.A OD1   no hydrogen  3.312  N/A
ARG 195.A NH2  ASP 18.A OD1   no hydrogen  3.059  N/A
LEU 196.A N    GLU 221.A OE2  no hydrogen  2.748  N/A
LEU 203.A N    PRO 199.A O    no hydrogen  3.167  N/A
ALA 204.A N    GLY 200.A O    no hydrogen  2.999  N/A
ALA 205.A N    PRO 201.A O    no hydrogen  3.018  N/A
LEU 206.A N    VAL 202.A O    no hydrogen  2.969  N/A
ALA 207.A N    LEU 203.A O    no hydrogen  2.758  N/A
ALA 208.A N    ALA 204.A O    no hydrogen  2.989  N/A
GLY 209.A N    LEU 206.A O    no hydrogen  3.017  N/A
ASP 210.A N    ALA 205.A O    no hydrogen  3.455  N/A
GLN 213.A N    ASP 210.A OD1  no hydrogen  3.394  N/A
LEU 214.A N    ASP 210.A O    no hydrogen  3.030  N/A
ALA 215.A N    PRO 211.A O    no hydrogen  2.888  N/A
LEU 217.A N    LEU 214.A O    no hydrogen  2.839  N/A
LEU 218.A N    LEU 214.A O    no hydrogen  3.204  N/A
LEU 218.A N    ALA 215.A O    no hydrogen  3.375  N/A
GLY 219.A N    LEU 12.A O     no hydrogen  3.031  N/A
ASN 220.A ND2  VAL 250.A O    no hydrogen  2.957  N/A
ASN 220.A ND2  GLY 252.A O    no hydrogen  2.668  N/A
GLU 221.A N    LEU 14.A O     no hydrogen  2.897  N/A
MET 222.A N    ASN 220.A OD1  no hydrogen  2.892  N/A
GLN 223.A N    ASN 220.A O    no hydrogen  3.048  N/A
ALA 226.A N    MET 222.A O    no hydrogen  2.994  N/A
VAL 227.A N    GLN 223.A O    no hydrogen  2.833  N/A
SER 228.A N    ALA 224.A O    no hydrogen  2.935  N/A
SER 228.A OG   GLU 183.A OE1  no hydrogen  2.567  N/A
LEU 229.A N    ALA 225.A O    no hydrogen  3.009  N/A
ASP 230.A N    ALA 226.A O    no hydrogen  2.878  N/A
ALA 232.A N    ASP 230.A OD1  no hydrogen  2.953  N/A
LEU 233.A N    ASP 230.A O    no hydrogen  3.039  N/A
ALA 234.A N    PRO 231.A O    no hydrogen  3.202  N/A
ALA 236.A N    ALA 232.A O    no hydrogen  2.983  N/A
LEU 237.A N    LEU 233.A O    no hydrogen  2.922  N/A
ARG 238.A N    ALA 234.A O    no hydrogen  3.110  N/A
ALA 239.A N    ARG 235.A O    no hydrogen  2.822  N/A
GLY 240.A N    ALA 236.A O    no hydrogen  3.039  N/A
VAL 241.A N    LEU 237.A O    no hydrogen  3.287  N/A
GLU 242.A N    ARG 238.A O    no hydrogen  2.817  N/A
ALA 243.A N    ALA 239.A O    no hydrogen  2.869  N/A
GLY 244.A N    VAL 241.A O    no hydrogen  2.898  N/A
ALA 245.A N    GLY 240.A O    no hydrogen  3.063  N/A
LEU 246.A N    LEU 260.A O    no hydrogen  2.829  N/A
ILE 249.A N    ALA 258.A O    no hydrogen  3.032  N/A
SER 251.A N    THR 256.A O    no hydrogen  2.791  N/A
SER 253.A OG   LEU 175.A O    no hydrogen  3.396  N/A
SER 253.A OG   GLY 254.A O    no hydrogen  3.545  N/A
THR 256.A OG1  GLY 97.A O     no hydrogen  2.448  N/A
CYS 257.A N    ALA 169.A O    no hydrogen  2.952  N/A
CYS 257.A SG   PRO 255.A O    no hydrogen  3.556  N/A
ALA 258.A N    ILE 249.A O    no hydrogen  2.847  N/A
PHE 259.A N    VAL 167.A O    no hydrogen  2.689  N/A
LEU 260.A N    ALA 247.A O    no hydrogen  2.990  N/A
CYS 261.A N    HIS 165.A O    no hydrogen  2.849  N/A
CYS 261.A SG   PHE 259.A O    no hydrogen  3.962  N/A
SER 266.A N    SER 263.A OG   no hydrogen  3.237  N/A
ALA 267.A N    SER 263.A O    no hydrogen  2.956  N/A
ILE 268.A N    ALA 264.A O    no hydrogen  3.034  N/A
ASP 269.A N    SER 265.A O    no hydrogen  3.144  N/A
VAL 270.A N    SER 266.A O    no hydrogen  2.752  N/A
GLY 271.A N    ALA 267.A O    no hydrogen  2.784  N/A
ALA 272.A N    ILE 268.A O    no hydrogen  2.835  N/A
GLN 273.A N    ASP 269.A O    no hydrogen  3.116  N/A
LEU 274.A N    VAL 270.A O    no hydrogen  2.895  N/A
SER 275.A N    GLY 271.A O    no hydrogen  2.861  N/A
GLY 276.A N    ALA 272.A O    no hydrogen  2.930  N/A
ALA 277.A N    GLN 273.A O    no hydrogen  3.047  N/A
GLY 278.A N    SER 275.A O    no hydrogen  3.277  N/A
ARG 281.A N    PHE 170.A O    no hydrogen  2.837  N/A
ARG 281.A NE   ALA 171.A O    no hydrogen  3.367  N/A
THR 282.A N    PHE 170.A O    no hydrogen  3.376  N/A
ARG 284.A N    LEU 168.A O    no hydrogen  2.902  N/A
ALA 286.A N    TRP 166.A O    no hydrogen  3.012  N/A
THR 287.A N    SER 35.A OG    no hydrogen  2.763  N/A
GLY 288.A N    PHE 164.A O    no hydrogen  3.093  N/A
VAL 290.A N    ALA 33.A O     no hydrogen  3.123  N/A
ALA 293.A N    ALA 140.A O    no hydrogen  2.948  N/A
ARG 294.A N    ARG 5.A O      no hydrogen  3.001  N/A
ARG 294.A NH1  GLY 292.A O    no hydrogen  3.205  N/A
VAL 296.A N    THR 3.A O      no hydrogen  2.803  N/A
SER 297.A N    THR 3.A O      no hydrogen  3.383  N/A