Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 3vkd_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
ARG 6.A N      PRO 3.A O      no hydrogen  2.822  N/A
ARG 6.A NH1    PRO 3.A O      no hydrogen  3.550  N/A
ARG 9.A N      GLU 136.A OE2  no hydrogen  2.928  N/A
VAL 10.A N     GLU 136.A OE1  no hydrogen  2.838  N/A
ALA 12.A N     GLY 8.A O      no hydrogen  3.104  N/A
ARG 13.A N     ARG 9.A O      no hydrogen  2.974  N/A
ARG 13.A NE    ALA 48.A O     no hydrogen  2.705  N/A
ARG 13.A NH2   PHE 47.A O     no hydrogen  3.165  N/A
LEU 14.A N     VAL 10.A O     no hydrogen  2.886  N/A
ARG 15.A N     LEU 11.A O     no hydrogen  2.848  N/A
ARG 15.A NE    ASP 207.A O    no hydrogen  2.892  N/A
ARG 15.A NH2   ASP 207.A O    no hydrogen  3.547  N/A
GLU 16.A N     ALA 12.A O     no hydrogen  2.948  N/A
GLU 16.A N     ARG 13.A O     no hydrogen  3.252  N/A
HIS 17.A N     ARG 13.A O     no hydrogen  2.865  N/A
HIS 17.A ND1   GLN 18.A O     no hydrogen  2.712  N/A
GLY 20.A N     ASP 231.A O    no hydrogen  3.036  N/A
VAL 22.A N     VAL 233.A O    no hydrogen  2.865  N/A
HIS 23.A ND1   PHE 235.A O    no hydrogen  2.900  N/A
ILE 24.A N     PHE 235.A O    no hydrogen  2.856  N/A
ILE 25.A N     LEU 51.A O     no hydrogen  2.887  N/A
PHE 28.A N     ASP 26.A OD1   no hydrogen  2.984  N/A
LYS 29.A N     ASP 26.A O     no hydrogen  3.156  N/A
LYS 29.A NZ    GLU 240.A OE1  no hydrogen  2.864  N/A
VAL 30.A N     ASP 26.A O     no hydrogen  2.835  N/A
ALA 35.A N     PRO 31.A O     no hydrogen  2.993  N/A
VAL 36.A N     VAL 32.A O     no hydrogen  2.918  N/A
GLU 37.A N     THR 33.A O     no hydrogen  3.094  N/A
LYS 38.A N     GLU 34.A O     no hydrogen  2.865  N/A
LYS 38.A NZ    GLU 34.A OE2   no hydrogen  2.671  N/A
LYS 38.A NZ    LEU 239.A O    no hydrogen  2.833  N/A
ALA 39.A N     ALA 35.A O     no hydrogen  2.757  N/A
ALA 40.A N     VAL 36.A O     no hydrogen  3.233  N/A
GLU 41.A N     GLU 37.A O     no hydrogen  3.412  N/A
LEU 42.A N     LYS 38.A O     no hydrogen  2.949  N/A
THR 43.A N     ALA 39.A O     no hydrogen  3.151  N/A
THR 43.A OG1   ALA 39.A O     no hydrogen  2.885  N/A
THR 43.A OG1   THR 75.A OG1   no hydrogen  2.582  N/A
ARG 44.A N     ALA 40.A O     no hydrogen  3.268  N/A
ARG 44.A NH1   GLU 41.A OE1   no hydrogen  3.061  N/A
LEU 45.A N     GLU 41.A O     no hydrogen  3.077  N/A
GLY 46.A N     THR 43.A O     no hydrogen  2.858  N/A
PHE 47.A N     LEU 42.A O     no hydrogen  3.256  N/A
VAL 50.A N     PRO 78.A O     no hydrogen  2.908  N/A
LEU 51.A N     HIS 23.A O     no hydrogen  3.510  N/A
LEU 52.A N     VAL 80.A O     no hydrogen  2.845  N/A
ALA 53.A N     ILE 25.A O     no hydrogen  3.036  N/A
SER 54.A N     HIS 82.A O     no hydrogen  3.367  N/A
SER 54.A OG    ASP 26.A OD1   no hydrogen  3.500  N/A
SER 54.A OG    ASP 26.A OD2   no hydrogen  3.283  N/A
SER 54.A OG    ASP 56.A O     no hydrogen  2.874  N/A
ASP 56.A N     SER 54.A OG    no hydrogen  3.088  N/A
TYR 57.A OH    PRO 84.A O     no hydrogen  2.690  N/A
HIS 63.A N     SER 59.A O     no hydrogen  3.039  N/A
HIS 63.A NE2   PRO 27.A O     no hydrogen  2.732  N/A
MET 64.A N     PHE 60.A O     no hydrogen  2.766  N/A
GLU 65.A N     GLU 61.A O     no hydrogen  3.117  N/A
TYR 67.A OH    VAL 30.A O     no hydrogen  2.673  N/A
VAL 68.A N     MET 64.A O     no hydrogen  2.764  N/A
ALA 69.A N     GLU 65.A O     no hydrogen  3.113  N/A
ALA 70.A N     PRO 66.A O     no hydrogen  2.917  N/A
VAL 71.A N     TYR 67.A O     no hydrogen  3.031  N/A
LYS 72.A N     VAL 68.A O     no hydrogen  2.825  N/A
LYS 72.A NZ    ASP 98.A OD1   no hydrogen  3.281  N/A
LYS 72.A NZ    ASP 98.A OD2   no hydrogen  2.855  N/A
ALA 73.A N     ALA 69.A O     no hydrogen  2.976  N/A
ALA 74.A N     VAL 71.A O     no hydrogen  2.937  N/A
THR 75.A OG1   THR 43.A OG1   no hydrogen  2.582  N/A
LEU 77.A N     THR 75.A OG1   no hydrogen  3.091  N/A
VAL 79.A N     ASP 98.A OD2   no hydrogen  2.798  N/A
VAL 80.A N     VAL 50.A O     no hydrogen  2.912  N/A
LEU 81.A N     ALA 99.A O     no hydrogen  2.884  N/A
HIS 82.A N     LEU 52.A O     no hydrogen  2.887  N/A
ARG 86.A N     GLY 90.A O     no hydrogen  3.045  N/A
ARG 86.A NH2   TYR 57.A O     no hydrogen  2.820  N/A
GLY 88.A N     GLU 120.A OE1  no hydrogen  3.036  N/A
ALA 89.A N     ARG 86.A O     no hydrogen  2.932  N/A
GLY 90.A N     ARG 86.A O     no hydrogen  2.840  N/A
PHE 91.A N     THR 121.A OG1  no hydrogen  2.917  N/A
ARG 95.A NH1   ARG 128.A O    no hydrogen  3.530  N/A
ASP 98.A N     VAL 79.A O     no hydrogen  2.946  N/A
ALA 99.A N     VAL 79.A O     no hydrogen  3.328  N/A
LEU 100.A N    GLU 136.A O    no hydrogen  2.799  N/A
LEU 101.A N    LEU 81.A O     no hydrogen  2.772  N/A
LEU 102.A N    LEU 138.A O    no hydrogen  2.918  N/A
ALA 104.A N    THR 140.A O    no hydrogen  2.748  N/A
LEU 105.A N    PHE 113.A O    no hydrogen  2.967  N/A
SER 108.A N    LEU 105.A O    no hydrogen  2.932  N/A
SER 108.A OG   ASP 110.A O    no hydrogen  3.432  N/A
SER 108.A OG   LEU 155.A O    no hydrogen  2.601  N/A
GLY 109.A N    GLY 156.A O    no hydrogen  2.936  N/A
ASP 110.A N    SER 108.A OG   no hydrogen  2.986  N/A
TYR 112.A N    ASP 110.A OD1  no hydrogen  2.964  N/A
TYR 112.A OH   GLU 120.A OE1  no hydrogen  2.621  N/A
PHE 113.A N    ASP 110.A O    no hydrogen  2.925  N/A
VAL 114.A N    ASP 110.A O    no hydrogen  3.058  N/A
TRP 115.A N    ASP 111.A O    no hydrogen  3.133  N/A
LYS 116.A N    ASP 111.A O    no hydrogen  3.072  N/A
LYS 116.A NZ   ASP 111.A OD2  no hydrogen  2.628  N/A
SER 117.A N    TYR 112.A O    no hydrogen  2.880  N/A
SER 117.A OG   TYR 112.A O    no hydrogen  3.328  N/A
PHE 118.A N    TRP 115.A O    no hydrogen  2.861  N/A
GLU 120.A N    LYS 116.A O    no hydrogen  3.010  N/A
THR 121.A N    SER 117.A O    no hydrogen  2.922  N/A
THR 121.A OG1  SER 117.A O    no hydrogen  2.667  N/A
LEU 122.A N    PHE 118.A O    no hydrogen  2.932  N/A
ALA 123.A N    LEU 119.A O    no hydrogen  2.861  N/A
ALA 124.A N    GLU 120.A O    no hydrogen  3.087  N/A
PHE 125.A N    THR 121.A O    no hydrogen  3.123  N/A
PHE 125.A N    LEU 122.A O    no hydrogen  3.082  N/A
ARG 128.A NE   GLU 61.A OE1   no hydrogen  3.026  N/A
ARG 128.A NH2  GLU 61.A OE1   no hydrogen  3.453  N/A
ARG 128.A NH2  GLU 61.A OE2   no hydrogen  2.879  N/A
ILE 129.A N    PRO 126.A O    no hydrogen  3.310  N/A
GLU 133.A N    PRO 130.A O    no hydrogen  2.710  N/A
TRP 134.A N    ARG 131.A O    no hydrogen  3.211  N/A
TRP 134.A NE1  PRO 126.A O    no hydrogen  2.851  N/A
GLU 136.A N    ASP 98.A O     no hydrogen  3.025  N/A
LEU 137.A N    LEU 4.A O      no hydrogen  2.845  N/A
LEU 138.A N    LEU 100.A O    no hydrogen  2.851  N/A
LEU 139.A N    HIS 181.A ND1  no hydrogen  2.971  N/A
THR 140.A N    LEU 102.A O    no hydrogen  2.968  N/A
THR 140.A OG1  LEU 138.A O    no hydrogen  2.964  N/A
VAL 141.A N    MET 182.A O    no hydrogen  2.923  N/A
ALA 142.A N    ALA 104.A O    no hydrogen  2.923  N/A
LEU 143.A N    TYR 184.A O    no hydrogen  2.982  N/A
PHE 145.A N    TYR 186.A O    no hydrogen  2.812  N/A
GLU 147.A N    GLU 190.A OE2  no hydrogen  3.217  N/A
ARG 150.A NH1  ASP 56.A OD2   no hydrogen  2.965  N/A
ARG 150.A NH2  ASP 56.A OD1   no hydrogen  2.760  N/A
THR 151.A N    ASP 148.A OD1  no hydrogen  2.971  N/A
THR 151.A OG1  ASP 148.A OD1  no hydrogen  3.115  N/A
THR 151.A OG1  ASP 148.A OD2  no hydrogen  2.548  N/A
GLY 152.A N    ASP 148.A O    no hydrogen  3.017  N/A
ASP 153.A N    PRO 149.A O    no hydrogen  2.756  N/A
LEU 154.A N    ARG 150.A O    no hydrogen  3.031  N/A
LEU 155.A N    THR 151.A O    no hydrogen  2.767  N/A
GLY 156.A N    GLY 152.A O    no hydrogen  2.901  N/A
VAL 158.A N    GLY 107.A O    no hydrogen  3.346  N/A
VAL 160.A N    THR 144.A O    no hydrogen  2.922  N/A
SER 161.A N    GLU 167.A OE1  no hydrogen  2.864  N/A
ALA 163.A N    SER 161.A OG   no hydrogen  3.359  N/A
THR 165.A OG1  ASP 169.A OD2  no hydrogen  2.893  N/A
GLU 166.A N    SER 164.A OG   no hydrogen  3.139  N/A
ASP 169.A N    THR 165.A O    no hydrogen  2.841  N/A
ARG 170.A N    GLU 166.A O    no hydrogen  3.175  N/A
TYR 171.A N    GLU 167.A O    no hydrogen  3.113  N/A
TYR 171.A OH   GLU 167.A OE2  no hydrogen  2.559  N/A
LEU 172.A N    ILE 168.A O    no hydrogen  2.834  N/A
HIS 173.A N    ASP 169.A O    no hydrogen  3.026  N/A
VAL 174.A N    ARG 170.A O    no hydrogen  3.114  N/A
ALA 175.A N    TYR 171.A O    no hydrogen  2.788  N/A
ARG 176.A N    LEU 172.A O    no hydrogen  3.005  N/A
ARG 176.A NH1  GLY 203.A O    no hydrogen  2.924  N/A
ALA 177.A N    HIS 173.A O    no hydrogen  2.927  N/A
PHE 178.A N    VAL 174.A O    no hydrogen  2.852  N/A
GLY 179.A N    ARG 176.A O    no hydrogen  3.013  N/A
PHE 180.A N    ALA 175.A O    no hydrogen  3.062  N/A
HIS 181.A N    LEU 139.A O    no hydrogen  2.764  N/A
MET 182.A N    LEU 139.A O    no hydrogen  3.164  N/A
VAL 183.A N    VAL 209.A O    no hydrogen  2.822  N/A
TYR 184.A N    VAL 141.A O    no hydrogen  2.764  N/A
TYR 184.A OH   SER 213.A OG   no hydrogen  3.252  N/A
LEU 185.A N    PHE 211.A O    no hydrogen  2.885  N/A
TYR 186.A N    LEU 143.A O    no hydrogen  3.002  N/A
SER 187.A N    SER 213.A O    no hydrogen  3.055  N/A
SER 187.A OG   PHE 145.A O    no hydrogen  2.818  N/A
ARG 188.A NE   ASP 148.A OD1  no hydrogen  3.008  N/A
ARG 188.A NE   THR 151.A OG1  no hydrogen  3.259  N/A
ARG 188.A NH2  THR 55.A OG1   no hydrogen  2.940  N/A
ARG 188.A NH2  THR 151.A OG1  no hydrogen  2.931  N/A
ASN 189.A ND2  GLU 147.A O    no hydrogen  2.912  N/A
GLU 190.A N    SER 187.A OG   no hydrogen  2.878  N/A
VAL 196.A N    PRO 193.A O    no hydrogen  2.903  N/A
VAL 197.A N    PRO 193.A O    no hydrogen  3.213  N/A
ARG 198.A N    PRO 194.A O    no hydrogen  2.956  N/A
ARG 198.A NH1  SER 228.A OG   no hydrogen  3.076  N/A
HIS 199.A N    GLU 195.A O    no hydrogen  3.015  N/A
HIS 199.A NE2  ASP 169.A OD1  no hydrogen  2.763  N/A
PHE 200.A N    VAL 196.A O    no hydrogen  2.888  N/A
ARG 201.A N    VAL 197.A O    no hydrogen  2.879  N/A
ARG 201.A NE   ARG 201.A O    no hydrogen  3.205  N/A
ARG 201.A NH1  GLY 229.A O    no hydrogen  3.318  N/A
ARG 201.A NH1  ASP 231.A OD2  no hydrogen  2.792  N/A
ARG 201.A NH2  GLY 205.A O    no hydrogen  3.456  N/A
ARG 201.A NH2  GLN 208.A O    no hydrogen  2.883  N/A
LYS 202.A N    ARG 198.A O    no hydrogen  3.007  N/A
GLY 203.A N    HIS 199.A O    no hydrogen  3.068  N/A
GLY 203.A N    PHE 200.A O    no hydrogen  3.120  N/A
LEU 204.A N    PHE 200.A O    no hydrogen  2.927  N/A
GLY 205.A N    GLN 208.A OE1  no hydrogen  2.821  N/A
GLN 208.A N    GLY 205.A O    no hydrogen  3.119  N/A
GLN 208.A NE2  ALA 175.A O    no hydrogen  2.987  N/A
GLN 208.A NE2  PHE 180.A O    no hydrogen  2.884  N/A
VAL 209.A N    HIS 181.A O    no hydrogen  2.998  N/A
LEU 210.A N    ASP 231.A OD2  no hydrogen  2.813  N/A
PHE 211.A N    VAL 183.A O    no hydrogen  2.861  N/A
VAL 212.A N    TYR 232.A O    no hydrogen  3.016  N/A
SER 213.A N    LEU 185.A O    no hydrogen  2.873  N/A
SER 213.A OG   TYR 184.A OH   no hydrogen  3.252  N/A
ASN 215.A ND2  ARG 188.A O    no hydrogen  2.953  N/A
ASN 215.A ND2  GLU 190.A O    no hydrogen  2.872  N/A
ARG 217.A N    GLN 221.A OE1  no hydrogen  2.779  N/A
SER 218.A OG   GLN 221.A OE1  no hydrogen  3.361  N/A
GLY 219.A N    GLU 250.A OE1  no hydrogen  3.274  N/A
GLY 219.A N    GLU 250.A OE2  no hydrogen  3.169  N/A
ARG 220.A NH1  GLU 224.A OE1  no hydrogen  3.270  N/A
GLN 221.A N    SER 218.A OG   no hydrogen  3.231  N/A
GLN 221.A NE2  ASN 215.A O    no hydrogen  3.032  N/A
VAL 222.A N    SER 218.A O    no hydrogen  3.288  N/A
THR 223.A N    GLY 219.A O    no hydrogen  2.948  N/A
THR 223.A OG1  GLY 219.A O    no hydrogen  3.173  N/A
GLU 224.A N    ARG 220.A O    no hydrogen  3.020  N/A
TYR 225.A N    GLN 221.A O    no hydrogen  3.010  N/A
TYR 225.A OH   VAL 192.A O    no hydrogen  2.764  N/A
LEU 226.A N    VAL 222.A O    no hydrogen  2.879  N/A
ASP 227.A N    THR 223.A O    no hydrogen  2.798  N/A
SER 228.A N    GLU 224.A O    no hydrogen  2.971  N/A
SER 228.A OG   GLU 224.A O    no hydrogen  3.098  N/A
GLY 229.A N    LEU 226.A O    no hydrogen  2.977  N/A
ALA 230.A N    TYR 225.A O    no hydrogen  3.001  N/A
ASP 231.A N    LEU 210.A O    no hydrogen  2.795  N/A
TYR 232.A N    LEU 210.A O    no hydrogen  3.130  N/A
TYR 232.A OH   LEU 14.A O     no hydrogen  2.733  N/A
VAL 233.A N    GLY 20.A O     no hydrogen  3.142  N/A
GLY 234.A N    VAL 212.A O    no hydrogen  2.822  N/A
PHE 235.A N    VAL 22.A O     no hydrogen  3.119  N/A
LEU 239.A N    ALA 236.A O    no hydrogen  2.998  N/A
GLU 240.A N    GLY 237.A O    no hydrogen  2.971  N/A
GLN 241.A NE2  ALA 238.A O    no hydrogen  3.287  N/A
TRP 244.A N    GLN 241.A O    no hydrogen  3.226  N/A
SER 246.A N    ASP 243.A O    no hydrogen  3.208  N/A
SER 246.A OG   ASP 243.A OD1  no hydrogen  2.684  N/A
SER 246.A OG   ASP 243.A OD2  no hydrogen  3.561  N/A
ALA 247.A N    ASP 243.A O    no hydrogen  3.276  N/A
LEU 248.A N    TRP 244.A O    no hydrogen  2.835  N/A
ALA 249.A N    ARG 245.A O    no hydrogen  3.051  N/A
GLU 250.A N    SER 246.A O    no hydrogen  3.014  N/A
ILE 251.A N    ALA 247.A O    no hydrogen  2.970  N/A
ALA 252.A N    LEU 248.A O    no hydrogen  2.866  N/A
GLY 253.A N    ALA 249.A O    no hydrogen  2.844  N/A