Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 3ypi_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
ARG 2.A NE     ASP 226.A OD1  no hydrogen  2.968  N/A
ARG 2.A NH1    SER 201.A O    no hydrogen  3.109  N/A
ARG 2.A NH2    ALA 223.A O    no hydrogen  2.681  N/A
ARG 2.A NH2    ASP 226.A OD1  no hydrogen  3.155  N/A
PHE 5.A N      ASP 226.A O    no hydrogen  3.381  N/A
VAL 6.A N      GLU 36.A O     no hydrogen  2.731  N/A
GLY 7.A N      PHE 228.A O    no hydrogen  3.095  N/A
GLY 8.A N      VAL 38.A O     no hydrogen  2.802  N/A
ASN 9.A N      VAL 230.A O    no hydrogen  2.654  N/A
ASN 9.A ND2    GLN 94.A OE1   no hydrogen  2.624  N/A
PHE 10.A N     CYS 40.A O     no hydrogen  2.934  N/A
LYS 11.A NZ    GLU 96.A OE1   no hydrogen  2.338  N/A
LYS 11.A NZ    GLU 96.A OE2   no hydrogen  3.313  N/A
ASN 13.A ND2   PHE 10.A O     no hydrogen  3.063  N/A
SER 15.A OG    SER 18.A OG    no hydrogen  3.143  N/A
SER 18.A N     SER 15.A OG    no hydrogen  3.386  N/A
SER 18.A OG    SER 15.A OG    no hydrogen  3.143  N/A
ILE 19.A N     SER 15.A O     no hydrogen  2.904  N/A
LYS 20.A N     LYS 16.A O     no hydrogen  2.921  N/A
LYS 20.A NZ    GLN 17.A OE1   no hydrogen  3.077  N/A
GLU 21.A N     GLN 17.A O     no hydrogen  2.878  N/A
ILE 22.A N     SER 18.A O     no hydrogen  3.030  N/A
ILE 22.A N     ILE 19.A O     no hydrogen  3.029  N/A
VAL 23.A N     ILE 19.A O     no hydrogen  3.058  N/A
GLU 24.A N     LYS 20.A O     no hydrogen  2.990  N/A
ARG 25.A N     GLU 21.A O     no hydrogen  3.481  N/A
ARG 25.A NH1   GLU 21.A OE1   no hydrogen  3.143  N/A
LEU 26.A N     ILE 22.A O     no hydrogen  3.221  N/A
ASN 27.A N     VAL 23.A O     no hydrogen  3.461  N/A
ASN 27.A ND2   LEU 52.A O     no hydrogen  3.253  N/A
THR 28.A N     ARG 25.A O     no hydrogen  3.028  N/A
ALA 29.A N     ARG 25.A O     no hydrogen  2.808  N/A
GLU 36.A N     PHE 4.A O      no hydrogen  2.982  N/A
VAL 37.A N     GLN 57.A O     no hydrogen  2.897  N/A
VAL 38.A N     VAL 6.A O      no hydrogen  3.041  N/A
ILE 39.A N     THR 59.A O     no hydrogen  3.191  N/A
CYS 40.A N     GLY 8.A O      no hydrogen  2.866  N/A
CYS 40.A SG    ALA 62.A O     no hydrogen  3.727  N/A
TYR 45.A N     PRO 42.A O     no hydrogen  2.845  N/A
LEU 46.A N     ALA 43.A O     no hydrogen  3.352  N/A
TYR 48.A OH    LYS 16.A O     no hydrogen  2.791  N/A
SER 49.A N     TYR 45.A O     no hydrogen  2.851  N/A
SER 49.A OG    TYR 45.A O     no hydrogen  2.919  N/A
VAL 50.A N     LEU 46.A O     no hydrogen  2.918  N/A
SER 51.A N     ASP 47.A O     no hydrogen  3.217  N/A
SER 51.A OG    ASP 47.A O     no hydrogen  2.999  N/A
SER 51.A OG    TYR 48.A O     no hydrogen  3.522  N/A
LEU 52.A N     TYR 48.A O     no hydrogen  3.156  N/A
LEU 52.A N     SER 49.A O     no hydrogen  3.140  N/A
VAL 53.A N     SER 49.A O     no hydrogen  3.232  N/A
LYS 54.A N     ASN 27.A OD1   no hydrogen  2.831  N/A
LYS 54.A NZ    LEU 52.A O     no hydrogen  2.748  N/A
LYS 55.A NZ    LEU 26.A O     no hydrogen  3.347  N/A
LYS 55.A NZ    ASN 27.A O     no hydrogen  2.595  N/A
LYS 55.A NZ    ALA 29.A O     no hydrogen  2.761  N/A
GLN 57.A N     GLN 57.A OE1   no hydrogen  2.888  N/A
GLN 57.A NE2   PRO 32.A O     no hydrogen  3.152  N/A
VAL 58.A N     LYS 55.A O     no hydrogen  3.106  N/A
THR 59.A N     VAL 37.A O     no hydrogen  2.906  N/A
GLY 61.A N     ILE 39.A O     no hydrogen  2.996  N/A
ALA 62.A N     TRP 89.A O     no hydrogen  2.802  N/A
GLN 63.A NE2   CYS 40.A O     no hydrogen  2.804  N/A
ASN 64.A ND2   GLU 103.A OE1  no hydrogen  3.533  N/A
TYR 66.A N     ASN 77.A O     no hydrogen  2.775  N/A
GLU 76.A N     PHE 73.A O     no hydrogen  3.361  N/A
ASN 77.A N     GLU 76.A OE1   no hydrogen  3.109  N/A
SER 78.A OG    ALA 69.A O     no hydrogen  2.923  N/A
ASP 80.A N     SER 78.A OG    no hydrogen  3.247  N/A
ILE 82.A N     SER 78.A O     no hydrogen  2.962  N/A
LYS 83.A N     VAL 79.A O     no hydrogen  2.906  N/A
LYS 83.A NZ    ASP 80.A OD1   no hydrogen  2.786  N/A
LYS 83.A NZ    GLN 118.A O    no hydrogen  2.799  N/A
ASP 84.A N     ASP 80.A O     no hydrogen  2.840  N/A
VAL 85.A N     GLN 81.A O     no hydrogen  3.484  N/A
GLY 86.A N     ILE 82.A O     no hydrogen  3.246  N/A
GLY 86.A N     LYS 83.A O     no hydrogen  2.927  N/A
ALA 87.A N     ILE 82.A O     no hydrogen  3.207  N/A
LYS 88.A N     VAL 60.A O     no hydrogen  2.999  N/A
VAL 90.A N     GLY 121.A O    no hydrogen  3.188  N/A
ILE 91.A N     ALA 62.A O     no hydrogen  3.160  N/A
LEU 92.A N     ILE 123.A O    no hydrogen  2.770  N/A
ARG 97.A N     GLN 94.A O     no hydrogen  2.838  N/A
ARG 98.A N     GLN 94.A O     no hydrogen  3.339  N/A
ARG 98.A NE    GLY 93.A O     no hydrogen  2.862  N/A
ARG 98.A NH1   ASP 105.A OD1  no hydrogen  2.719  N/A
ARG 98.A NH2   CYS 125.A O    no hydrogen  2.837  N/A
SER 99.A OG    SER 95.A O     no hydrogen  2.456  N/A
PHE 101.A N    ARG 97.A O     no hydrogen  2.612  N/A
LYS 106.A NZ   ASP 110.A OD1  no hydrogen  2.621  N/A
PHE 107.A N    ASP 104.A OD1  no hydrogen  2.974  N/A
ILE 108.A N    ASP 104.A O    no hydrogen  2.976  N/A
ALA 109.A N    ASP 105.A O    no hydrogen  2.839  N/A
ASP 110.A N    LYS 106.A O    no hydrogen  2.901  N/A
LYS 111.A N    PHE 107.A O    no hydrogen  3.034  N/A
LYS 111.A NZ   ASN 64.A OD1   no hydrogen  3.569  N/A
LYS 111.A NZ   ALA 65.A O     no hydrogen  3.459  N/A
LYS 111.A NZ   GLU 103.A OE1  no hydrogen  2.829  N/A
LYS 111.A NZ   GLU 103.A OE2  no hydrogen  2.609  N/A
THR 112.A N    ILE 108.A O    no hydrogen  2.764  N/A
THR 112.A OG1  ILE 108.A O    no hydrogen  2.847  N/A
LYS 113.A N    ALA 109.A O    no hydrogen  3.081  N/A
LYS 113.A NZ   GLU 152.A O    no hydrogen  2.585  N/A
LYS 113.A NZ   GLU 152.A OE1  no hydrogen  2.557  N/A
PHE 114.A N    ASP 110.A O    no hydrogen  3.202  N/A
ALA 115.A N    LYS 111.A O    no hydrogen  3.075  N/A
LEU 116.A N    THR 112.A O    no hydrogen  3.363  N/A
GLY 117.A N    LYS 113.A O    no hydrogen  2.994  N/A
GLN 118.A N    PHE 114.A O    no hydrogen  2.877  N/A
GLN 118.A N    ALA 115.A O    no hydrogen  3.015  N/A
GLY 119.A N    LEU 116.A O    no hydrogen  3.231  N/A
VAL 120.A N    ALA 115.A O    no hydrogen  3.203  N/A
GLY 121.A N    LYS 88.A O     no hydrogen  2.840  N/A
VAL 122.A N    ASN 158.A O    no hydrogen  3.076  N/A
ILE 123.A N    VAL 90.A O     no hydrogen  2.938  N/A
LEU 124.A N    VAL 160.A O    no hydrogen  2.879  N/A
CYS 125.A N    LEU 92.A O     no hydrogen  3.030  N/A
ILE 126.A N    ALA 162.A O    no hydrogen  3.178  N/A
GLY 127.A N    GLN 145.A OE1  no hydrogen  2.957  N/A
GLU 128.A N    GLU 128.A OE1  no hydrogen  2.952  N/A
THR 129.A N    GLU 132.A OE1  no hydrogen  3.103  N/A
THR 129.A OG1  GLU 132.A OE1  no hydrogen  3.082  N/A
LYS 133.A N    THR 129.A O    no hydrogen  3.066  N/A
LYS 134.A N    LEU 130.A O    no hydrogen  2.719  N/A
ALA 135.A N    GLU 131.A O    no hydrogen  2.966  N/A
GLY 136.A N    LYS 133.A O    no hydrogen  3.146  N/A
LYS 137.A N    GLU 132.A O    no hydrogen  2.759  N/A
LYS 137.A NZ   GLY 136.A O    no hydrogen  2.634  N/A
LYS 137.A NZ   ASP 140.A OD2  no hydrogen  2.941  N/A
VAL 141.A N    LYS 137.A O    no hydrogen  2.887  N/A
VAL 142.A N    THR 138.A O    no hydrogen  3.066  N/A
GLU 143.A N    LEU 139.A O    no hydrogen  2.959  N/A
ARG 144.A N    ASP 140.A O    no hydrogen  3.369  N/A
ARG 144.A NE   ASP 105.A OD2  no hydrogen  3.219  N/A
ARG 144.A NH2  ASP 105.A OD2  no hydrogen  2.750  N/A
GLN 145.A N    VAL 141.A O    no hydrogen  2.981  N/A
GLN 145.A N    VAL 142.A O    no hydrogen  3.215  N/A
GLN 145.A NE2  GLY 127.A O    no hydrogen  3.365  N/A
LEU 146.A N    VAL 142.A O    no hydrogen  2.842  N/A
ASN 147.A N    GLU 143.A O    no hydrogen  2.813  N/A
VAL 149.A N    GLN 145.A O    no hydrogen  3.497  N/A
LEU 150.A N    LEU 146.A O    no hydrogen  2.818  N/A
GLU 151.A N    ASN 147.A O    no hydrogen  2.867  N/A
GLU 152.A N    VAL 149.A O    no hydrogen  2.923  N/A
VAL 153.A N    VAL 149.A O    no hydrogen  2.685  N/A
TRP 156.A NE1  VAL 153.A O    no hydrogen  2.836  N/A
THR 157.A OG1  ASP 155.A OD1  no hydrogen  2.655  N/A
THR 157.A OG1  ASP 155.A OD2  no hydrogen  2.739  N/A
ASN 158.A ND2  VAL 120.A O    no hydrogen  2.890  N/A
VAL 160.A N    VAL 122.A O    no hydrogen  3.085  N/A
VAL 161.A N    ARG 204.A O    no hydrogen  3.133  N/A
ALA 162.A N    LEU 124.A O    no hydrogen  2.692  N/A
TYR 163.A N    LEU 206.A O    no hydrogen  2.771  N/A
TYR 163.A OH   GLU 128.A OE1  no hydrogen  2.755  N/A
GLU 164.A N    ILE 126.A O    no hydrogen  3.183  N/A
VAL 166.A N    GLU 128.A O    no hydrogen  3.040  N/A
TRP 167.A NE1  GLU 128.A OE2  no hydrogen  2.962  N/A
ALA 168.A N    PRO 165.A O    no hydrogen  2.899  N/A
ILE 169.A N    VAL 166.A O    no hydrogen  3.214  N/A
THR 171.A OG1  TRP 167.A O    no hydrogen  3.175  N/A
GLY 172.A N    SER 210.A OG   no hydrogen  2.763  N/A
ALA 175.A N    TYR 207.A OH   no hydrogen  3.000  N/A
THR 176.A N    ASP 179.A OD2  no hydrogen  3.478  N/A
THR 176.A OG1  GLU 178.A OE1  no hydrogen  2.941  N/A
ASP 179.A N    THR 176.A OG1  no hydrogen  3.328  N/A
ALA 180.A N    THR 176.A O    no hydrogen  2.937  N/A
GLN 181.A N    PRO 177.A O    no hydrogen  2.895  N/A
GLN 181.A NE2  GLN 181.A O    no hydrogen  2.979  N/A
ASP 182.A N    GLU 178.A O    no hydrogen  3.459  N/A
ILE 183.A N    ASP 179.A O    no hydrogen  3.498  N/A
HIS 184.A N    ALA 180.A O    no hydrogen  2.945  N/A
HIS 184.A ND1  ASP 224.A O    no hydrogen  2.961  N/A
ALA 185.A N    GLN 181.A O    no hydrogen  2.933  N/A
SER 186.A N    ASP 182.A O    no hydrogen  2.912  N/A
SER 186.A OG   ASP 182.A O    no hydrogen  2.841  N/A
ILE 187.A N    ILE 183.A O    no hydrogen  2.903  N/A
ARG 188.A N    HIS 184.A O    no hydrogen  2.898  N/A
ARG 188.A NE   ASP 224.A OD1  no hydrogen  2.705  N/A
ARG 188.A NH1  ALA 200.A O    no hydrogen  2.769  N/A
ARG 188.A NH1  LEU 203.A O    no hydrogen  2.648  N/A
ARG 188.A NH2  ASP 224.A O    no hydrogen  3.553  N/A
ARG 188.A NH2  ASP 226.A OD2  no hydrogen  2.677  N/A
LYS 189.A N    ALA 185.A O    no hydrogen  3.016  N/A
LYS 189.A NZ   ASP 197.A OD1  no hydrogen  2.761  N/A
PHE 190.A N    SER 186.A O    no hydrogen  3.021  N/A
LEU 191.A N    ILE 187.A O    no hydrogen  2.813  N/A
ALA 192.A N    LYS 189.A O    no hydrogen  3.037  N/A
SER 193.A N    LYS 189.A O    no hydrogen  3.021  N/A
SER 193.A OG   LYS 189.A O    no hydrogen  3.014  N/A
SER 193.A OG   PHE 190.A O    no hydrogen  2.621  N/A
LYS 194.A N    PHE 190.A O    no hydrogen  3.050  N/A
LYS 194.A NZ   ASN 147.A OD1  no hydrogen  2.817  N/A
LYS 194.A NZ   GLU 151.A OE1  no hydrogen  2.661  N/A
LYS 194.A NZ   GLU 151.A OE2  no hydrogen  2.628  N/A
LEU 195.A N    ALA 192.A O    no hydrogen  3.083  N/A
GLY 196.A N    ALA 192.A O    no hydrogen  2.859  N/A
LYS 198.A NZ   GLU 202.A OE1  no hydrogen  3.516  N/A
LYS 198.A NZ   GLU 202.A OE2  no hydrogen  2.810  N/A
ALA 200.A N    GLY 196.A O    no hydrogen  3.089  N/A
SER 201.A N    ASP 197.A O    no hydrogen  2.864  N/A
SER 201.A OG   ASP 197.A O    no hydrogen  2.683  N/A
GLU 202.A N    LYS 198.A O    no hydrogen  2.926  N/A
GLU 202.A N    ALA 199.A O    no hydrogen  3.147  N/A
LEU 203.A N    ALA 199.A O    no hydrogen  2.997  N/A
ARG 204.A NH1  THR 3.A O      no hydrogen  2.527  N/A
ARG 204.A NH1  GLU 36.A OE1   no hydrogen  2.988  N/A
ARG 204.A NH2  GLU 36.A OE1   no hydrogen  2.844  N/A
ARG 204.A NH2  GLU 36.A OE2   no hydrogen  2.844  N/A
ILE 205.A N    ASP 226.A OD2  no hydrogen  2.880  N/A
LEU 206.A N    VAL 161.A O    no hydrogen  2.902  N/A
TYR 207.A OH   GLY 209.A O    no hydrogen  2.783  N/A
GLY 208.A N    TYR 163.A O    no hydrogen  2.888  N/A
SER 210.A OG   ALA 168.A O    no hydrogen  2.793  N/A
ASN 212.A N    ASN 215.A OD1  no hydrogen  2.864  N/A
ASN 212.A ND2  SER 210.A O    no hydrogen  3.207  N/A
GLY 213.A N    GLU 238.A OE2  no hydrogen  2.892  N/A
SER 214.A N    ASN 212.A OD1  no hydrogen  2.950  N/A
ASN 215.A N    ASN 212.A OD1  no hydrogen  3.447  N/A
ASN 215.A ND2  SER 210.A O    no hydrogen  2.933  N/A
ALA 216.A N    ASN 212.A O    no hydrogen  3.346  N/A
THR 218.A N    ASN 215.A O    no hydrogen  3.153  N/A
THR 218.A OG1  ASN 215.A O    no hydrogen  2.663  N/A
PHE 219.A N    ALA 216.A O    no hydrogen  2.803  N/A
LYS 220.A N    VAL 217.A O    no hydrogen  3.194  N/A
LYS 220.A NZ   ASP 221.A OD1  no hydrogen  2.564  N/A
LYS 220.A NZ   ASP 221.A OD2  no hydrogen  2.996  N/A
LYS 222.A NZ   ASP 221.A O    no hydrogen  2.667  N/A
ASP 224.A N    GLN 181.A OE1  no hydrogen  2.870  N/A
ASP 226.A N    ILE 205.A O    no hydrogen  2.987  N/A
PHE 228.A N    PHE 5.A O      no hydrogen  3.177  N/A
LEU 229.A N    TYR 207.A O    no hydrogen  2.733  N/A
VAL 230.A N    GLY 7.A O      no hydrogen  2.876  N/A
SER 234.A N    GLY 231.A O    no hydrogen  3.095  N/A
SER 234.A OG   ASN 9.A O      no hydrogen  2.814  N/A
SER 234.A OG   GLY 231.A O    no hydrogen  2.730  N/A
LYS 236.A N    ALA 233.A O    no hydrogen  2.978  N/A
PHE 239.A N    LYS 236.A O    no hydrogen  3.345  N/A
VAL 240.A N    PRO 237.A O    no hydrogen  3.032  N/A
ILE 242.A N    GLU 238.A O    no hydrogen  3.276  N/A
ILE 242.A N    PHE 239.A O    no hydrogen  3.052  N/A
ILE 243.A N    PHE 239.A O    no hydrogen  3.220  N/A
ASN 244.A N    VAL 240.A O    no hydrogen  2.803  N/A
ASN 244.A ND2  SER 30.A O     no hydrogen  3.113  N/A
ASN 244.A ND2  ASN 247.A OD1  no hydrogen  2.732  N/A
SER 245.A OG   ILE 242.A O    no hydrogen  2.726  N/A
ARG 246.A NH1  VAL 225.A O    no hydrogen  2.610  N/A
ARG 246.A NH2  PHE 219.A O    no hydrogen  2.846  N/A
ARG 246.A NH2  VAL 225.A O    no hydrogen  2.575  N/A
ASN 247.A N    ASN 244.A O    no hydrogen  2.955  N/A